RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 GBA2Q9HCG7 927 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 PCDHAC2Q9Y5I4 1007 aa11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 PITPNM2Q9BZ72 1349 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 IRS2Q9Y4H2 1338 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 THSD7BQ9C0I4 1608 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 FOXN1O15353 648 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 SASH1O94885 1247 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 HIBADHP31937 336 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 GYG1P46976 350 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 NBPF9Q3BBW0 867 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 CAVIN4Q5BKX8 364 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 PRAMEF18Q5VWM3 479 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 MEIS3Q99687 375 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 IQSEC3Q9UPP2 1182 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
SRGAP3-206ENST00000480750 AOC2O75106 756 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 IL1R1P14778 569 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 NF2P35240 595 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 RBM5P52756 815 aaKnown RBP eCLIP11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 DLGAP5Q15398 846 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 COL13A1Q5TAT6 717 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 CERS5Q8N5B7 392 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 HHIPL1Q96JK4 782 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 LRRFIP2Q9Y608 721 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 PAPPA2Q9BXP8 1791 aa11.38□□□□□ -0.59
SRGAP3-206ENST00000480750 AK9Q5TCS8 1911 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 WNT10BO00744 389 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 MYO1BO43795 1136 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 PDE8BO95263 885 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 IFIT1P09914 478 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 MAP2K2P36507 400 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 RFX5P48382 616 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 ZNF157P51786 506 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 BRPF1P55201 1214 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 APOBEC3FQ8IUX4 373 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 SIL1Q9H173 461 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 PA2G4Q9UQ80 394 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-206ENST00000480750 AOX1Q06278 1338 aa11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 CASP8AP2Q9UKL3 1982 aa11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 EYA2O00167 538 aa11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 TRIM27P14373 513 aa11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 FKBP1AP62942 108 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 NOGQ13253 232 aa11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 PUM3Q15397 648 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 GRIK5Q16478 980 aa11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 ARHGAP45Q92619 1136 aa11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-206ENST00000480750 GNAI3P08754 354 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 SLC5A1P13866 664 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 LBX1P52954 281 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 PTPN12Q05209 780 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 CFAP100Q494V2 611 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 MOB2Q70IA6 237 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 TDRD7Q8NHU6 1098 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 CCDC102AQ96A19 550 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 FAM84BQ96KN1 310 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 ZIC5Q96T25 663 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 VEZTQ9HBM0 779 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 TTF2Q9UNY4 1162 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
SRGAP3-206ENST00000480750 BCAMP50895 628 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 FKBP1BP68106 108 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 INTS3Q68E01 1043 aaKnown RBP11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 ATF7IPQ6VMQ6 1270 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 TMEM57Q8N5G2 664 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 PRDM10Q9NQV6 1147 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 CEP126Q9P2H0 1117 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 FZD1Q9UP38 647 aa11.34□□□□□ -0.59
SRGAP3-206ENST00000480750 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 CLRN2A0PK11 232 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 CA12O43570 354 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 HSPA8P11142 646 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 PRKG1Q13976 671 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 ATG9AQ7Z3C6 839 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 FBXO33Q7Z6M2 555 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 FTSJ3Q8IY81 847 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 VGLL2Q8N8G2 317 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 MTMR14Q8NCE2 650 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 LPIN2Q92539 896 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-206ENST00000480750 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 NPM3O75607 178 aaKnown RBP11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 CAPN15O75808 1086 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 CIAO1O76071 339 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms