RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 IL1R1P14778 569 aa19.23■□□□□ 0.67
LIMS3-203ENST00000480744 DGKZQ13574 1117 aa19.23■□□□□ 0.67
LIMS3-203ENST00000480744 PRKG1Q13976 671 aa19.23■□□□□ 0.67
LIMS3-203ENST00000480744 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
LIMS3-203ENST00000480744 MCOLN1Q9GZU1 580 aa19.23■□□□□ 0.67
LIMS3-203ENST00000480744 RNF186Q9NXI6 227 aa19.23■□□□□ 0.67
LIMS3-203ENST00000480744 SAGE1Q9NXZ1 904 aa19.23■□□□□ 0.67
LIMS3-203ENST00000480744 KAZALD1Q96I82 304 aa19.22■□□□□ 0.67
LIMS3-203ENST00000480744 ZBED3Q96IU2 234 aaPredicted RBP19.22■□□□□ 0.67
LIMS3-203ENST00000480744 PUS3Q9BZE2 481 aaKnown RBP19.22■□□□□ 0.67
LIMS3-203ENST00000480744 BICC1Q9H694 974 aaKnown RBP19.22■□□□□ 0.67
LIMS3-203ENST00000480744 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
LIMS3-203ENST00000480744 ARAP2Q8WZ64 1704 aa19.21■□□□□ 0.67
LIMS3-203ENST00000480744 PCDHAC2Q9Y5I4 1007 aa19.21■□□□□ 0.67
LIMS3-203ENST00000480744 PTPRCP08575 1304 aa19.21■□□□□ 0.67
LIMS3-203ENST00000480744 GYG1P46976 350 aa19.2■□□□□ 0.66
LIMS3-203ENST00000480744 CFAP100Q494V2 611 aa19.2■□□□□ 0.66
LIMS3-203ENST00000480744 UTYO14607 1347 aa19.2■□□□□ 0.66
LIMS3-203ENST00000480744 MYO1BO43795 1136 aa19.19■□□□□ 0.66
LIMS3-203ENST00000480744 RBM5P52756 815 aaKnown RBP eCLIP19.19■□□□□ 0.66
LIMS3-203ENST00000480744 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
LIMS3-203ENST00000480744 MKRN3Q13064 507 aaKnown RBP19.19■□□□□ 0.66
LIMS3-203ENST00000480744 UBE4AQ14139 1066 aa19.19■□□□□ 0.66
LIMS3-203ENST00000480744 ARMC9Q7Z3E5 817 aa19.19■□□□□ 0.66
LIMS3-203ENST00000480744 REM2Q8IYK8 340 aaPredicted RBP19.19■□□□□ 0.66
LIMS3-203ENST00000480744 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.19■□□□□ 0.66
LIMS3-203ENST00000480744 COL1A1P02452 1464 aaPredicted RBP19.19■□□□□ 0.66
LIMS3-203ENST00000480744 CLRN2A0PK11 232 aa19.18■□□□□ 0.66
LIMS3-203ENST00000480744 HIBADHP31937 336 aaKnown RBP19.18■□□□□ 0.66
LIMS3-203ENST00000480744 FKBP1AP62942 108 aaKnown RBP19.18■□□□□ 0.66
LIMS3-203ENST00000480744 ANKRD44Q8N8A2 993 aa19.18■□□□□ 0.66
LIMS3-203ENST00000480744 CDCA7LQ96GN5 454 aa19.18■□□□□ 0.66
LIMS3-203ENST00000480744 DEFB129Q9H1M3 183 aa19.18■□□□□ 0.66
LIMS3-203ENST00000480744 VEZTQ9HBM0 779 aa19.18■□□□□ 0.66
LIMS3-203ENST00000480744 ANGEL1Q9UNK9 670 aaKnown RBP19.18■□□□□ 0.66
LIMS3-203ENST00000480744 MROH5Q6ZUA9 1318 aa19.18■□□□□ 0.66
LIMS3-203ENST00000480744 PTPN12Q05209 780 aaKnown RBP19.17■□□□□ 0.66
LIMS3-203ENST00000480744 RABL6Q3YEC7 729 aaPredicted RBP19.17■□□□□ 0.66
LIMS3-203ENST00000480744 METTL24Q5JXM2 366 aa19.17■□□□□ 0.66
LIMS3-203ENST00000480744 MTMR14Q8NCE2 650 aa19.17■□□□□ 0.66
LIMS3-203ENST00000480744 FZD1Q9UP38 647 aa19.17■□□□□ 0.66
LIMS3-203ENST00000480744 MYH13Q9UKX3 1938 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 SPDYE2BA6NHP3 402 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 SPDYE6P0CI01 402 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 LRRC24Q50LG9 513 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 MFSD14BQ5SR56 506 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 VPS37DQ86XT2 251 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 TDRD7Q8NHU6 1098 aaKnown RBP19.16■□□□□ 0.66
LIMS3-203ENST00000480744 FAM84BQ96KN1 310 aaPredicted RBP19.16■□□□□ 0.66
LIMS3-203ENST00000480744 PRMT6Q96LA8 375 aaPredicted RBP19.16■□□□□ 0.66
LIMS3-203ENST00000480744 SMC4Q9NTJ3 1288 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 RIPOR2Q9Y4F9 1068 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 FAM205AQ6ZU69 1335 aa19.16■□□□□ 0.66
LIMS3-203ENST00000480744 KLHDC4Q8TBB5 520 aa19.15■□□□□ 0.66
LIMS3-203ENST00000480744 TTF2Q9UNY4 1162 aaKnown RBP19.15■□□□□ 0.66
LIMS3-203ENST00000480744 IQSEC3Q9UPP2 1182 aaPredicted RBP19.15■□□□□ 0.66
LIMS3-203ENST00000480744 AOX1Q06278 1338 aa19.15■□□□□ 0.66
LIMS3-203ENST00000480744 ALDH1L2Q3SY69 923 aa19.14■□□□□ 0.65
LIMS3-203ENST00000480744 USP44Q9H0E7 712 aa19.14■□□□□ 0.65
LIMS3-203ENST00000480744 PPP2R3BQ9Y5P8 575 aa19.14■□□□□ 0.65
LIMS3-203ENST00000480744 FRAT2O75474 233 aaPredicted RBP19.13■□□□□ 0.65
LIMS3-203ENST00000480744 CHAF1AQ13111 956 aaPredicted RBP19.13■□□□□ 0.65
LIMS3-203ENST00000480744 SSC5DA1L4H1 1573 aa19.13■□□□□ 0.65
LIMS3-203ENST00000480744 PPP1R12BO60237 982 aaPredicted RBP19.12■□□□□ 0.65
LIMS3-203ENST00000480744 TBC1D8O95759 1140 aa19.12■□□□□ 0.65
LIMS3-203ENST00000480744 SREBF2Q12772 1141 aa19.12■□□□□ 0.65
LIMS3-203ENST00000480744 SUPT20HL1Q3ZLR7 823 aa19.12■□□□□ 0.65
LIMS3-203ENST00000480744 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
LIMS3-203ENST00000480744 LDLRAD1Q5T700 205 aa19.12■□□□□ 0.65
LIMS3-203ENST00000480744 PDE8BO95263 885 aa19.11■□□□□ 0.65
LIMS3-203ENST00000480744 NBPF12Q5TAG4 269 aaPredicted RBP19.11■□□□□ 0.65
LIMS3-203ENST00000480744 FBXO33Q7Z6M2 555 aa19.11■□□□□ 0.65
LIMS3-203ENST00000480744 SLC10A4Q96EP9 437 aa19.11■□□□□ 0.65
LIMS3-203ENST00000480744 TDRD3Q9H7E2 651 aaKnown RBP19.11■□□□□ 0.65
LIMS3-203ENST00000480744 SERPINA10Q9UK55 444 aa19.11■□□□□ 0.65
LIMS3-203ENST00000480744 OTOFQ9HC10 1997 aa19.11■□□□□ 0.65
LIMS3-203ENST00000480744 TM4SF4P48230 202 aa19.1■□□□□ 0.65
LIMS3-203ENST00000480744 RASA3Q14644 834 aa19.1■□□□□ 0.65
LIMS3-203ENST00000480744 SPRYD7Q5W111 196 aa19.1■□□□□ 0.65
LIMS3-203ENST00000480744 CTU1Q7Z7A3 348 aaKnown RBP19.1■□□□□ 0.65
LIMS3-203ENST00000480744 VGLL2Q8N8G2 317 aa19.1■□□□□ 0.65
LIMS3-203ENST00000480744 CLMNQ96JQ2 1002 aa19.1■□□□□ 0.65
LIMS3-203ENST00000480744 ZNF70Q9UC06 446 aaPredicted RBP19.1■□□□□ 0.65
LIMS3-203ENST00000480744 CRKP46108 304 aa19.09■□□□□ 0.65
LIMS3-203ENST00000480744 TNFAIP1Q13829 316 aa19.09■□□□□ 0.65
LIMS3-203ENST00000480744 SPDYE2Q495Y8 402 aa19.09■□□□□ 0.65
LIMS3-203ENST00000480744 DZIP1LQ8IYY4 767 aaKnown RBP19.09■□□□□ 0.65
LIMS3-203ENST00000480744 IFIT1P09914 478 aaKnown RBP19.08■□□□□ 0.64
LIMS3-203ENST00000480744 IREB2P48200 963 aaKnown RBP19.08■□□□□ 0.64
LIMS3-203ENST00000480744 BCAMP50895 628 aa19.08■□□□□ 0.64
LIMS3-203ENST00000480744 MLLT1Q03111 559 aaPredicted RBP19.08■□□□□ 0.64
LIMS3-203ENST00000480744 PUM3Q15397 648 aaKnown RBP19.08■□□□□ 0.64
LIMS3-203ENST00000480744 GRIK5Q16478 980 aa19.08■□□□□ 0.64
LIMS3-203ENST00000480744 MAP3K11Q16584 847 aa19.08■□□□□ 0.64
LIMS3-203ENST00000480744 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.64
LIMS3-203ENST00000480744 TBC1D22AQ8WUA7 517 aa19.08■□□□□ 0.64
LIMS3-203ENST00000480744 NOB1Q9ULX3 412 aaKnown RBP19.08■□□□□ 0.64
LIMS3-203ENST00000480744 LAMB1P07942 1786 aa19.07■□□□□ 0.64
LIMS3-203ENST00000480744 TCP10L2B9ZVM9 353 aa19.07■□□□□ 0.64
LIMS3-203ENST00000480744 EYA2O00167 538 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms