RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 EYA2O00167 538 aa18.77■□□□□ 0.6
TDP2-205ENST00000480495 GNAI3P08754 354 aa18.77■□□□□ 0.6
TDP2-205ENST00000480495 GYG1P46976 350 aa18.77■□□□□ 0.6
TDP2-205ENST00000480495 PTPN12Q05209 780 aaKnown RBP18.77■□□□□ 0.6
TDP2-205ENST00000480495 GRM1Q13255 1194 aa18.77■□□□□ 0.6
TDP2-205ENST00000480495 CAVIN4Q5BKX8 364 aa18.77■□□□□ 0.6
TDP2-205ENST00000480495 MTMR14Q8NCE2 650 aa18.77■□□□□ 0.6
TDP2-205ENST00000480495 ZBED3Q96IU2 234 aaPredicted RBP18.77■□□□□ 0.6
TDP2-205ENST00000480495 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
TDP2-205ENST00000480495 POLR2AP24928 1970 aaKnown RBP18.76■□□□□ 0.59
TDP2-205ENST00000480495 FOXN1O15353 648 aa18.76■□□□□ 0.59
TDP2-205ENST00000480495 BCAR3O75815 825 aa18.76■□□□□ 0.59
TDP2-205ENST00000480495 CTCFP49711 727 aaPredicted RBP18.76■□□□□ 0.59
TDP2-205ENST00000480495 PUM3Q15397 648 aaKnown RBP18.76■□□□□ 0.59
TDP2-205ENST00000480495 DLGAP5Q15398 846 aa18.76■□□□□ 0.59
TDP2-205ENST00000480495 COL13A1Q5TAT6 717 aaPredicted RBP18.76■□□□□ 0.59
TDP2-205ENST00000480495 ATF7IPQ6VMQ6 1270 aa18.76■□□□□ 0.59
TDP2-205ENST00000480495 FBXO33Q7Z6M2 555 aa18.76■□□□□ 0.59
TDP2-205ENST00000480495 VPS37DQ86XT2 251 aa18.76■□□□□ 0.59
TDP2-205ENST00000480495 MEIS3Q99687 375 aa18.76■□□□□ 0.59
TDP2-205ENST00000480495 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
TDP2-205ENST00000480495 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
TDP2-205ENST00000480495 THSD7BQ9C0I4 1608 aa18.75■□□□□ 0.59
TDP2-205ENST00000480495 IFIT1P09914 478 aaKnown RBP18.75■□□□□ 0.59
TDP2-205ENST00000480495 TRIM27P14373 513 aa18.75■□□□□ 0.59
TDP2-205ENST00000480495 FKBP1BP68106 108 aa18.75■□□□□ 0.59
TDP2-205ENST00000480495 IFFO2Q5TF58 517 aa18.75■□□□□ 0.59
TDP2-205ENST00000480495 APOBEC3FQ8IUX4 373 aaKnown RBP18.75■□□□□ 0.59
TDP2-205ENST00000480495 FRAT1Q92837 279 aaPredicted RBP18.75■□□□□ 0.59
TDP2-205ENST00000480495 CIAO1O76071 339 aa18.74■□□□□ 0.59
TDP2-205ENST00000480495 FGFR2P21802 821 aa18.74■□□□□ 0.59
TDP2-205ENST00000480495 MFSD14BQ5SR56 506 aa18.74■□□□□ 0.59
TDP2-205ENST00000480495 RGMBQ6NW40 437 aa18.74■□□□□ 0.59
TDP2-205ENST00000480495 BEGAINQ9BUH8 593 aa18.74■□□□□ 0.59
TDP2-205ENST00000480495 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
TDP2-205ENST00000480495 F8W031 263 aaPredicted RBP18.73■□□□□ 0.59
TDP2-205ENST00000480495 AOC2O75106 756 aa18.73■□□□□ 0.59
TDP2-205ENST00000480495 NOGQ13253 232 aa18.73■□□□□ 0.59
TDP2-205ENST00000480495 ATG9AQ7Z3C6 839 aa18.73■□□□□ 0.59
TDP2-205ENST00000480495 CCDC102AQ96A19 550 aa18.73■□□□□ 0.59
TDP2-205ENST00000480495 MYO1BO43795 1136 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 FRAT2O75474 233 aaPredicted RBP18.72■□□□□ 0.59
TDP2-205ENST00000480495 SLC5A1P13866 664 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 NF2P35240 595 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 CFAP100Q494V2 611 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 ZKSCAN2Q63HK3 967 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 TBC1D22AQ8WUA7 517 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 LPIN2Q92539 896 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 PRDM10Q9NQV6 1147 aa18.72■□□□□ 0.59
TDP2-205ENST00000480495 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
TDP2-205ENST00000480495 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
TDP2-205ENST00000480495 IL15P40933 162 aaPredicted RBP18.71■□□□□ 0.59
TDP2-205ENST00000480495 SIL1Q9H173 461 aa18.71■□□□□ 0.59
TDP2-205ENST00000480495 COPRSQ9NQ92 184 aa18.71■□□□□ 0.59
TDP2-205ENST00000480495 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
TDP2-205ENST00000480495 SCAF8Q9UPN6 1271 aaKnown RBP18.71■□□□□ 0.59
TDP2-205ENST00000480495 BCAMP50895 628 aa18.7■□□□□ 0.58
TDP2-205ENST00000480495 ZNF157P51786 506 aaPredicted RBP18.7■□□□□ 0.58
TDP2-205ENST00000480495 MTX1Q13505 466 aa18.7■□□□□ 0.58
TDP2-205ENST00000480495 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
TDP2-205ENST00000480495 SERPINA10Q9UK55 444 aa18.7■□□□□ 0.58
TDP2-205ENST00000480495 TTF2Q9UNY4 1162 aaKnown RBP18.7■□□□□ 0.58
TDP2-205ENST00000480495 IQSEC3Q9UPP2 1182 aaPredicted RBP18.7■□□□□ 0.58
TDP2-205ENST00000480495 COL1A1P02452 1464 aaPredicted RBP18.7■□□□□ 0.58
TDP2-205ENST00000480495 PAPPA2Q9BXP8 1791 aa18.69■□□□□ 0.58
TDP2-205ENST00000480495 FAM155AB1AL88 458 aaPredicted RBP18.69■□□□□ 0.58
TDP2-205ENST00000480495 CA12O43570 354 aa18.69■□□□□ 0.58
TDP2-205ENST00000480495 GNAI2P04899 355 aa18.69■□□□□ 0.58
TDP2-205ENST00000480495 RBM5P52756 815 aaKnown RBP eCLIP18.69■□□□□ 0.58
TDP2-205ENST00000480495 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
TDP2-205ENST00000480495 PRAMEF18Q5VWM3 479 aa18.69■□□□□ 0.58
TDP2-205ENST00000480495 PRMT6Q96LA8 375 aaPredicted RBP18.69■□□□□ 0.58
TDP2-205ENST00000480495 TNNQ9UQP3 1299 aa18.69■□□□□ 0.58
TDP2-205ENST00000480495 PPP2R3BQ9Y5P8 575 aa18.69■□□□□ 0.58
TDP2-205ENST00000480495 SRGAP3O43295 1099 aa18.68■□□□□ 0.58
TDP2-205ENST00000480495 HSPA8P11142 646 aaKnown RBP18.68■□□□□ 0.58
TDP2-205ENST00000480495 LBX1P52954 281 aa18.68■□□□□ 0.58
TDP2-205ENST00000480495 ATP2B3Q16720 1220 aa18.68■□□□□ 0.58
TDP2-205ENST00000480495 TNS4Q8IZW8 715 aa18.68■□□□□ 0.58
TDP2-205ENST00000480495 DEFB129Q9H1M3 183 aa18.68■□□□□ 0.58
TDP2-205ENST00000480495 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
TDP2-205ENST00000480495 SLC10A3P09131 477 aa18.67■□□□□ 0.58
TDP2-205ENST00000480495 HDLBPQ00341 1268 aaKnown RBP18.67■□□□□ 0.58
TDP2-205ENST00000480495 TMEM57Q8N5G2 664 aa18.67■□□□□ 0.58
TDP2-205ENST00000480495 SUGT1Q9Y2Z0 365 aa18.67■□□□□ 0.58
TDP2-205ENST00000480495 PCDHAC2Q9Y5I4 1007 aa18.67■□□□□ 0.58
TDP2-205ENST00000480495 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
TDP2-205ENST00000480495 TTLL12Q14166 644 aaPredicted RBP18.66■□□□□ 0.58
TDP2-205ENST00000480495 ARMC9Q7Z3E5 817 aa18.66■□□□□ 0.58
TDP2-205ENST00000480495 UBE2Q2LH0YL09 131 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 CRKP46108 304 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 MOB2Q70IA6 237 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 RASAL3Q86YV0 1011 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
TDP2-205ENST00000480495 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
TDP2-205ENST00000480495 WDR66Q8TBY9 1149 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 ZIC5Q96T25 663 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 MRIQ9BWK5 157 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 VEZTQ9HBM0 779 aa18.65■□□□□ 0.58
TDP2-205ENST00000480495 GNL3LQ9NVN8 582 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms