RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SUPT20HQ8NEM7 779 aa15.13■□□□□ 0.01
TRA2B-212ENST00000480461 ZC3H12CQ9C0D7 883 aaKnown RBP15.13■□□□□ 0.01
TRA2B-212ENST00000480461 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
TRA2B-212ENST00000480461 APBB1O00213 710 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 GYG1P46976 350 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 PUM3Q15397 648 aaKnown RBP15.12■□□□□ 0.01
TRA2B-212ENST00000480461 FBXO33Q7Z6M2 555 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 SAPCD2Q86UD0 394 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 LARGE2Q8N3Y3 721 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 EAF2Q96CJ1 260 aaPredicted RBP15.12■□□□□ 0.01
TRA2B-212ENST00000480461 DBNDD1Q9H9R9 158 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 PDE4DIPQ5VU43 2346 aa15.12■□□□□ 0.01
TRA2B-212ENST00000480461 CASP8AP2Q9UKL3 1982 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 SMARCA5O60264 1052 aaPredicted RBP15.11■□□□□ 0.01
TRA2B-212ENST00000480461 KCNJ4P48050 445 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 BCAMP50895 628 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
TRA2B-212ENST00000480461 ATP2B3Q16720 1220 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 LPIN2Q92539 896 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 EYA3Q99504 573 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 IL1RAPL2Q9NP60 686 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
TRA2B-212ENST00000480461 A0A1B0GUL7 405 aa15.1■□□□□ 0.01
TRA2B-212ENST00000480461 RAB11FIP3O75154 756 aa15.1■□□□□ 0.01
TRA2B-212ENST00000480461 DGKZQ13574 1117 aa15.1■□□□□ 0.01
TRA2B-212ENST00000480461 A0A1B0GUL6 1792 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 CELF2O95319 508 aaKnown RBP15.09■□□□□ 0.01
TRA2B-212ENST00000480461 HSP90AB4PQ58FF6 505 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 TNNI3KQ59H18 835 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 XAGE2Q96GT9 111 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 HHIPL1Q96JK4 782 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 CCDC8Q9H0W5 538 aaPredicted RBP15.09■□□□□ 0.01
TRA2B-212ENST00000480461 RWDD1Q9H446 243 aaPredicted RBP15.09■□□□□ 0.01
TRA2B-212ENST00000480461 CD209Q9NNX6 404 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 GPR108Q9NPR9 543 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
TRA2B-212ENST00000480461 ZNRF3Q9ULT6 936 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 FPGT-TNNI3KV9GXZ4 949 aa15.09■□□□□ 0.01
TRA2B-212ENST00000480461 ECE2O60344 883 aa15.08■□□□□ 0
TRA2B-212ENST00000480461 HIBADHP31937 336 aaKnown RBP15.08■□□□□ 0
TRA2B-212ENST00000480461 CXCL9Q07325 125 aa15.08■□□□□ 0
TRA2B-212ENST00000480461 SMC5Q8IY18 1101 aa15.08■□□□□ 0
TRA2B-212ENST00000480461 TDRD7Q8NHU6 1098 aaKnown RBP15.08■□□□□ 0
TRA2B-212ENST00000480461 KIF1BPQ96EK5 621 aa15.08■□□□□ 0
TRA2B-212ENST00000480461 NEUROD6Q96NK8 337 aa15.08■□□□□ 0
TRA2B-212ENST00000480461 COA1Q9GZY4 146 aa15.08■□□□□ 0
TRA2B-212ENST00000480461 ADARB2Q9NS39 739 aaKnown RBP15.08■□□□□ 0
TRA2B-212ENST00000480461 AKAP2Q9Y2D5 859 aa15.08■□□□□ 0
TRA2B-212ENST00000480461 RAD17O75943 681 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 IFIT1P09914 478 aaKnown RBP15.07■□□□□ 0
TRA2B-212ENST00000480461 SLC5A1P13866 664 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 IL1R1P14778 569 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 PHKA1P46020 1223 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 NIM1KQ8IY84 436 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 DBNDD2Q9BQY9 259 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 GPRC5DQ9NZD1 345 aa15.07■□□□□ 0
TRA2B-212ENST00000480461 DBNLQ9UJU6 430 aaKnown RBP15.07■□□□□ 0
TRA2B-212ENST00000480461 IQSEC3Q9UPP2 1182 aaPredicted RBP15.07■□□□□ 0
TRA2B-212ENST00000480461 CCDC102BQ68D86 513 aa15.06■□□□□ 0
TRA2B-212ENST00000480461 CIAPIN1Q6FI81 312 aa15.06■□□□□ 0
TRA2B-212ENST00000480461 PODNQ7Z5L7 613 aa15.06■□□□□ 0
TRA2B-212ENST00000480461 MXD3Q9BW11 206 aa15.06■□□□□ 0
TRA2B-212ENST00000480461 GLIS2Q9BZE0 524 aaPredicted RBP15.06■□□□□ 0
TRA2B-212ENST00000480461 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
TRA2B-212ENST00000480461 BCL11AQ9H165 835 aa15.06■□□□□ 0
TRA2B-212ENST00000480461 ANKRD45Q5TZF3 282 aa15.05■□□□□ -0
TRA2B-212ENST00000480461 AACSQ86V21 672 aa15.05■□□□□ -0
TRA2B-212ENST00000480461 GCC1Q96CN9 775 aa15.05■□□□□ -0
TRA2B-212ENST00000480461 ZNF609O15014 1411 aa15.05■□□□□ -0
TRA2B-212ENST00000480461 PSMD14O00487 310 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 NEFLP07196 543 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 VIL1P09327 827 aaKnown RBP15.04■□□□□ -0
TRA2B-212ENST00000480461 SCARF1Q14162 830 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 CAVIN4Q5BKX8 364 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 B4GALNT3Q6L9W6 998 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 ZNF804AQ7Z570 1209 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 OTUD7AQ8TE49 926 aaPredicted RBP15.04■□□□□ -0
TRA2B-212ENST00000480461 ZIC5Q96T25 663 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 JAG2Q9Y219 1238 aa15.04■□□□□ -0
TRA2B-212ENST00000480461 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
TRA2B-212ENST00000480461 G3V3G9 751 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 SOX10P56693 466 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 GTF2IP78347 998 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 NOGQ13253 232 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 GRIK5Q16478 980 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 DACT2Q5SW24 774 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 DCAF8Q5TAQ9 597 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 TTLL5Q6EMB2 1281 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 CLASRPQ8N2M8 674 aaKnown RBP15.03■□□□□ -0
TRA2B-212ENST00000480461 CERS5Q8N5B7 392 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 ZNF408Q9H9D4 720 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 PGAP2Q9UHJ9 254 aa15.03■□□□□ -0
TRA2B-212ENST00000480461 SCN9AQ15858 1988 aa15.02■□□□□ -0
TRA2B-212ENST00000480461 USP17L3A6NCW0 530 aa15.02■□□□□ -0
TRA2B-212ENST00000480461 USP17L4A6NCW7 530 aa15.02■□□□□ -0
TRA2B-212ENST00000480461 NUCB1Q02818 461 aa15.02■□□□□ -0
TRA2B-212ENST00000480461 PI16Q6UXB8 463 aa15.02■□□□□ -0
TRA2B-212ENST00000480461 USP17L1Q7RTZ2 530 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms