RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 JARID2Q92833 1246 aaPredicted RBP13.33□□□□□ -0.28
SMURF1-204ENST00000480055 PHAXQ9H814 394 aaKnown RBP13.33□□□□□ -0.28
SMURF1-204ENST00000480055 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
SMURF1-204ENST00000480055 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
SMURF1-204ENST00000480055 TM4SF4P48230 202 aa13.32□□□□□ -0.28
SMURF1-204ENST00000480055 FBXO46Q6PJ61 603 aaPredicted RBP13.32□□□□□ -0.28
SMURF1-204ENST00000480055 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
SMURF1-204ENST00000480055 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
SMURF1-204ENST00000480055 XDHP47989 1333 aa13.32□□□□□ -0.28
SMURF1-204ENST00000480055 HTTP42858 3142 aa13.32□□□□□ -0.28
SMURF1-204ENST00000480055 UBE2Q2LH0YL09 131 aa13.31□□□□□ -0.28
SMURF1-204ENST00000480055 GPR25O00155 361 aa13.31□□□□□ -0.28
SMURF1-204ENST00000480055 PDE8AO60658 829 aa13.31□□□□□ -0.28
SMURF1-204ENST00000480055 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
SMURF1-204ENST00000480055 CALD1Q05682 793 aaKnown RBP13.31□□□□□ -0.28
SMURF1-204ENST00000480055 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
SMURF1-204ENST00000480055 FBXW7Q969H0 707 aa13.31□□□□□ -0.28
SMURF1-204ENST00000480055 CFHR5Q9BXR6 569 aa13.31□□□□□ -0.28
SMURF1-204ENST00000480055 SCAF8Q9UPN6 1271 aaKnown RBP13.31□□□□□ -0.28
SMURF1-204ENST00000480055 MED23Q9ULK4 1368 aa13.31□□□□□ -0.28
SMURF1-204ENST00000480055 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
SMURF1-204ENST00000480055 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
SMURF1-204ENST00000480055 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
SMURF1-204ENST00000480055 GNAI1P63096 354 aa13.3□□□□□ -0.28
SMURF1-204ENST00000480055 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
SMURF1-204ENST00000480055 PODNQ7Z5L7 613 aa13.3□□□□□ -0.28
SMURF1-204ENST00000480055 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
SMURF1-204ENST00000480055 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
SMURF1-204ENST00000480055 ATP2B4P23634 1241 aa13.29□□□□□ -0.28
SMURF1-204ENST00000480055 SREBF2Q12772 1141 aa13.29□□□□□ -0.28
SMURF1-204ENST00000480055 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
SMURF1-204ENST00000480055 NBPF9Q3BBW0 867 aa13.29□□□□□ -0.28
SMURF1-204ENST00000480055 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
SMURF1-204ENST00000480055 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
SMURF1-204ENST00000480055 ARAP2Q8WZ64 1704 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 APAF1O14727 1248 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 FKTNO75072 461 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 CCDC30Q5VVM6 783 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 PRAMEF18Q5VWM3 479 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 CDC5LQ99459 802 aaKnown RBP13.28□□□□□ -0.28
SMURF1-204ENST00000480055 METTL22Q9BUU2 404 aaPredicted RBP13.28□□□□□ -0.28
SMURF1-204ENST00000480055 CHMP4AQ9BY43 222 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
SMURF1-204ENST00000480055 MKI67P46013 3256 aaKnown RBP13.27□□□□□ -0.28
SMURF1-204ENST00000480055 WNT10BO00744 389 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 NF2P35240 595 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 OGFOD1Q8N543 542 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 R3HDMLQ9H3Y0 253 aa13.27□□□□□ -0.29
SMURF1-204ENST00000480055 CTSWP56202 376 aa13.26□□□□□ -0.29
SMURF1-204ENST00000480055 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
SMURF1-204ENST00000480055 LHX8Q68G74 356 aa13.26□□□□□ -0.29
SMURF1-204ENST00000480055 TSHZ2Q9NRE2 1034 aa13.26□□□□□ -0.29
SMURF1-204ENST00000480055 CENPFP49454 3210 aa13.26□□□□□ -0.29
SMURF1-204ENST00000480055 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
SMURF1-204ENST00000480055 SASH1O94885 1247 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 MMP14P50281 582 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
SMURF1-204ENST00000480055 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 ARMC9Q7Z3E5 817 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 TMEM121BQ9BXQ6 578 aaPredicted RBP13.25□□□□□ -0.29
SMURF1-204ENST00000480055 STK31Q9BXU1 1019 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
SMURF1-204ENST00000480055 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
SMURF1-204ENST00000480055 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 ALDH1A1P00352 501 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
SMURF1-204ENST00000480055 LDLRAD1Q5T700 205 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 SPRYD7Q5W111 196 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 KSR2Q6VAB6 950 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 APOBEC3FQ8IUX4 373 aaKnown RBP13.24□□□□□ -0.29
SMURF1-204ENST00000480055 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 GREM2Q9H772 168 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
SMURF1-204ENST00000480055 MINPP1Q9UNW1 487 aa13.24□□□□□ -0.29
SMURF1-204ENST00000480055 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
SMURF1-204ENST00000480055 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
SMURF1-204ENST00000480055 PRKG1Q13976 671 aa13.23□□□□□ -0.29
SMURF1-204ENST00000480055 TTLL11Q8NHH1 800 aa13.23□□□□□ -0.29
SMURF1-204ENST00000480055 ZBED3Q96IU2 234 aaPredicted RBP13.23□□□□□ -0.29
SMURF1-204ENST00000480055 COA1Q9GZY4 146 aa13.23□□□□□ -0.29
SMURF1-204ENST00000480055 BRCA2P51587 3418 aa13.22□□□□□ -0.29
SMURF1-204ENST00000480055 MANSC4A6NHS7 340 aaPredicted RBP13.22□□□□□ -0.29
SMURF1-204ENST00000480055 IGKV5-2P06315 115 aa13.22□□□□□ -0.29
SMURF1-204ENST00000480055 KCNJ4P48050 445 aa13.22□□□□□ -0.29
SMURF1-204ENST00000480055 CWF19L2Q2TBE0 894 aaKnown RBP13.22□□□□□ -0.29
SMURF1-204ENST00000480055 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
SMURF1-204ENST00000480055 OTOP1Q7RTM1 612 aa13.22□□□□□ -0.29
SMURF1-204ENST00000480055 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
SMURF1-204ENST00000480055 PRKRIP1Q9H875 184 aaPredicted RBP13.22□□□□□ -0.29
SMURF1-204ENST00000480055 ANGEL1Q9UNK9 670 aaKnown RBP13.22□□□□□ -0.29
SMURF1-204ENST00000480055 TRIM17Q9Y577 477 aa13.22□□□□□ -0.29
SMURF1-204ENST00000480055 ZSWIM8A7E2V4 1837 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms