RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 CLRN2A0PK11 232 aa14.08□□□□□ -0.16
HDLBP-237ENST00000479169 F8W031 263 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-237ENST00000479169 TAF5LO75529 589 aa14.08□□□□□ -0.16
HDLBP-237ENST00000479169 FLIIQ13045 1269 aa14.08□□□□□ -0.16
HDLBP-237ENST00000479169 CCDC184Q52MB2 194 aa14.08□□□□□ -0.16
HDLBP-237ENST00000479169 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
HDLBP-237ENST00000479169 SLC10A4Q96EP9 437 aa14.08□□□□□ -0.16
HDLBP-237ENST00000479169 JAG2Q9Y219 1238 aa14.08□□□□□ -0.16
HDLBP-237ENST00000479169 MANSC4A6NHS7 340 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-237ENST00000479169 IGF2BP3O00425 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDLBP-237ENST00000479169 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-237ENST00000479169 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
HDLBP-237ENST00000479169 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
HDLBP-237ENST00000479169 WNK4Q96J92 1243 aa14.07□□□□□ -0.16
HDLBP-237ENST00000479169 MYH16Q9H6N6 1097 aa14.07□□□□□ -0.16
HDLBP-237ENST00000479169 TRIM17Q9Y577 477 aa14.07□□□□□ -0.16
HDLBP-237ENST00000479169 ANKRD18BA2A2Z9 1011 aa14.06□□□□□ -0.16
HDLBP-237ENST00000479169 CFAP100Q494V2 611 aa14.06□□□□□ -0.16
HDLBP-237ENST00000479169 NBPF12Q5TAG4 269 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-237ENST00000479169 MTMR14Q8NCE2 650 aa14.06□□□□□ -0.16
HDLBP-237ENST00000479169 LINS1Q8NG48 757 aa14.06□□□□□ -0.16
HDLBP-237ENST00000479169 PRMT6Q96LA8 375 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-237ENST00000479169 RBBP6Q7Z6E9 1792 aaKnown RBP14.06□□□□□ -0.16
HDLBP-237ENST00000479169 POTEFA5A3E0 1075 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 ALDH1A1P00352 501 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 GJA5P36382 358 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 FOXO4P98177 505 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 MAP3K11Q16584 847 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 OTOP1Q7RTM1 612 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 VEZTQ9HBM0 779 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 CHMP3Q9Y3E7 222 aa14.05□□□□□ -0.16
HDLBP-237ENST00000479169 ARAP2Q8WZ64 1704 aa14.04□□□□□ -0.16
HDLBP-237ENST00000479169 F6X3S4 739 aa14.04□□□□□ -0.16
HDLBP-237ENST00000479169 PPP1R12BO60237 982 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-237ENST00000479169 ZBTB48P10074 688 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-237ENST00000479169 CCDC27Q2M243 656 aa14.04□□□□□ -0.16
HDLBP-237ENST00000479169 C15orf52Q6ZUT6 534 aaKnown RBP14.04□□□□□ -0.16
HDLBP-237ENST00000479169 ZNF804AQ7Z570 1209 aa14.04□□□□□ -0.16
HDLBP-237ENST00000479169 PPP2R3BQ9Y5P8 575 aa14.04□□□□□ -0.16
HDLBP-237ENST00000479169 PLIN1O60240 522 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 IL1R1P14778 569 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 INHBEP58166 350 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 CAP1Q01518 475 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 CRHR2Q13324 411 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 IFIT5Q13325 482 aaKnown RBP14.03□□□□□ -0.16
HDLBP-237ENST00000479169 EPHA10Q5JZY3 1008 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 CD99L2Q8TCZ2 262 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 ZNF594Q96JF6 807 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-237ENST00000479169 FANCIQ9NVI1 1328 aa14.03□□□□□ -0.16
HDLBP-237ENST00000479169 IL16Q14005 1332 aa14.02□□□□□ -0.17
HDLBP-237ENST00000479169 MYO1BO43795 1136 aa14.02□□□□□ -0.17
HDLBP-237ENST00000479169 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-237ENST00000479169 RBM5P52756 815 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDLBP-237ENST00000479169 RASA3Q14644 834 aa14.02□□□□□ -0.17
HDLBP-237ENST00000479169 SUPT20HL1Q3ZLR7 823 aa14.02□□□□□ -0.17
HDLBP-237ENST00000479169 IREB2P48200 963 aaKnown RBP14.01□□□□□ -0.17
HDLBP-237ENST00000479169 FKBP1AP62942 108 aaKnown RBP14.01□□□□□ -0.17
HDLBP-237ENST00000479169 LMBR1LQ6UX01 489 aa14.01□□□□□ -0.17
HDLBP-237ENST00000479169 CDAN1Q8IWY9 1227 aa14.01□□□□□ -0.17
HDLBP-237ENST00000479169 PTPN18Q99952 460 aa14.01□□□□□ -0.17
HDLBP-237ENST00000479169 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
HDLBP-237ENST00000479169 CEP290O15078 2479 aa14.01□□□□□ -0.17
HDLBP-237ENST00000479169 VAMP4O75379 141 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 BEND3Q5T5X7 828 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 ERO1AQ96HE7 468 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 ELP3Q9H9T3 547 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 CNNM1Q9NRU3 951 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 PTPN22Q9Y2R2 807 aa14□□□□□ -0.17
HDLBP-237ENST00000479169 SALL2Q9Y467 1007 aaPredicted RBP14□□□□□ -0.17
HDLBP-237ENST00000479169 EXOSC9Q06265 439 aaKnown RBP13.99□□□□□ -0.17
HDLBP-237ENST00000479169 CCDC57Q2TAC2 916 aa13.99□□□□□ -0.17
HDLBP-237ENST00000479169 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
HDLBP-237ENST00000479169 LDHAL6AQ6ZMR3 332 aa13.99□□□□□ -0.17
HDLBP-237ENST00000479169 ANKRD13AQ8IZ07 590 aa13.99□□□□□ -0.17
HDLBP-237ENST00000479169 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
HDLBP-237ENST00000479169 TDRD3Q9H7E2 651 aaKnown RBP13.99□□□□□ -0.17
HDLBP-237ENST00000479169 EFCC1Q9HA90 598 aa13.99□□□□□ -0.17
HDLBP-237ENST00000479169 ZNF70Q9UC06 446 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-237ENST00000479169 FAM205AQ6ZU69 1335 aa13.98□□□□□ -0.17
HDLBP-237ENST00000479169 TESPA1A2RU30 521 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-237ENST00000479169 UNCXA6NJT0 531 aa13.98□□□□□ -0.17
HDLBP-237ENST00000479169 GRM8O00222 908 aa13.98□□□□□ -0.17
HDLBP-237ENST00000479169 GYG1P46976 350 aa13.98□□□□□ -0.17
HDLBP-237ENST00000479169 SP3Q02447 781 aa13.98□□□□□ -0.17
HDLBP-237ENST00000479169 MFSD14BQ5SR56 506 aa13.98□□□□□ -0.17
HDLBP-237ENST00000479169 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
HDLBP-237ENST00000479169 OTUD7BQ6GQQ9 843 aa13.98□□□□□ -0.17
HDLBP-237ENST00000479169 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
HDLBP-237ENST00000479169 TCP10L2B9ZVM9 353 aa13.97□□□□□ -0.17
HDLBP-237ENST00000479169 EN2P19622 333 aaPredicted RBP13.97□□□□□ -0.17
HDLBP-237ENST00000479169 GRIK5Q16478 980 aa13.97□□□□□ -0.17
HDLBP-237ENST00000479169 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.97□□□□□ -0.17
HDLBP-237ENST00000479169 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
HDLBP-237ENST00000479169 TDRD7Q8NHU6 1098 aaKnown RBP13.97□□□□□ -0.17
HDLBP-237ENST00000479169 ARMC5Q96C12 935 aa13.97□□□□□ -0.17
HDLBP-237ENST00000479169 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 293.9 ms