RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.51■■□□□ 1.35
SREBF1-212ENST00000478616 SASH1O94885 1247 aa23.5■■□□□ 1.35
SREBF1-212ENST00000478616 ABT1Q9ULW3 272 aaKnown RBP23.5■■□□□ 1.35
SREBF1-212ENST00000478616 COL1A1P02452 1464 aaPredicted RBP23.49■■□□□ 1.35
SREBF1-212ENST00000478616 HIBADHP31937 336 aaKnown RBP23.49■■□□□ 1.35
SREBF1-212ENST00000478616 FKBP1AP62942 108 aaKnown RBP23.49■■□□□ 1.35
SREBF1-212ENST00000478616 MTX1Q13505 466 aa23.49■■□□□ 1.35
SREBF1-212ENST00000478616 COPRSQ9NQ92 184 aa23.49■■□□□ 1.35
SREBF1-212ENST00000478616 IPO8O15397 1037 aaKnown RBP23.48■■□□□ 1.35
SREBF1-212ENST00000478616 HSPA1AP0DMV8 641 aaKnown RBP23.48■■□□□ 1.35
SREBF1-212ENST00000478616 HSPA1BP0DMV9 641 aaKnown RBP23.48■■□□□ 1.35
SREBF1-212ENST00000478616 ZKSCAN2Q63HK3 967 aa23.48■■□□□ 1.35
SREBF1-212ENST00000478616 CYP4F22Q6NT55 531 aa23.48■■□□□ 1.35
SREBF1-212ENST00000478616 DCPSQ96C86 337 aaKnown RBP23.48■■□□□ 1.35
SREBF1-212ENST00000478616 SIL1Q9H173 461 aa23.48■■□□□ 1.35
SREBF1-212ENST00000478616 ZNF408Q9H9D4 720 aa23.48■■□□□ 1.35
SREBF1-212ENST00000478616 PITPNM2Q9BZ72 1349 aa23.48■■□□□ 1.35
SREBF1-212ENST00000478616 WDR33Q9C0J8 1336 aaKnown RBP23.48■■□□□ 1.35
SREBF1-212ENST00000478616 CIAO1O76071 339 aa23.47■■□□□ 1.35
SREBF1-212ENST00000478616 BCAMP50895 628 aa23.47■■□□□ 1.35
SREBF1-212ENST00000478616 CDCA5Q96FF9 252 aa23.47■■□□□ 1.35
SREBF1-212ENST00000478616 IQSEC3Q9UPP2 1182 aaPredicted RBP23.47■■□□□ 1.35
SREBF1-212ENST00000478616 GNAI3P08754 354 aa23.45■■□□□ 1.34
SREBF1-212ENST00000478616 PRAMEF18Q5VWM3 479 aa23.45■■□□□ 1.34
SREBF1-212ENST00000478616 MTMR14Q8NCE2 650 aa23.45■■□□□ 1.34
SREBF1-212ENST00000478616 CAPNS2Q96L46 248 aa23.45■■□□□ 1.34
SREBF1-212ENST00000478616 PNMA6EA0A0J9YXQ4 647 aa23.44■■□□□ 1.34
SREBF1-212ENST00000478616 F8W031 263 aaPredicted RBP23.44■■□□□ 1.34
SREBF1-212ENST00000478616 PUM3Q15397 648 aaKnown RBP23.44■■□□□ 1.34
SREBF1-212ENST00000478616 ZIC5Q96T25 663 aa23.44■■□□□ 1.34
SREBF1-212ENST00000478616 FBXO3Q9UK99 471 aa23.44■■□□□ 1.34
SREBF1-212ENST00000478616 PAPPA2Q9BXP8 1791 aa23.43■■□□□ 1.34
SREBF1-212ENST00000478616 AOC2O75106 756 aa23.43■■□□□ 1.34
SREBF1-212ENST00000478616 SULF1Q8IWU6 871 aa23.43■■□□□ 1.34
SREBF1-212ENST00000478616 OGFOD1Q8N543 542 aa23.43■■□□□ 1.34
SREBF1-212ENST00000478616 HHIPL1Q96JK4 782 aa23.43■■□□□ 1.34
SREBF1-212ENST00000478616 PRMT6Q96LA8 375 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-212ENST00000478616 MMP14P50281 582 aa23.42■■□□□ 1.34
SREBF1-212ENST00000478616 MFSD14BQ5SR56 506 aa23.42■■□□□ 1.34
SREBF1-212ENST00000478616 GBA2Q9HCG7 927 aaPredicted RBP23.42■■□□□ 1.34
SREBF1-212ENST00000478616 WBP1LQ9NX94 342 aa23.42■■□□□ 1.34
SREBF1-212ENST00000478616 SSC5DA1L4H1 1573 aa23.41■■□□□ 1.34
SREBF1-212ENST00000478616 SRGAP3O43295 1099 aa23.41■■□□□ 1.34
SREBF1-212ENST00000478616 CFAP100Q494V2 611 aa23.41■■□□□ 1.34
SREBF1-212ENST00000478616 LPIN2Q92539 896 aa23.41■■□□□ 1.34
SREBF1-212ENST00000478616 SPDYE2BA6NHP3 402 aa23.4■■□□□ 1.34
SREBF1-212ENST00000478616 FAM155AB1AL88 458 aaPredicted RBP23.4■■□□□ 1.34
SREBF1-212ENST00000478616 ZBTB7BO15156 539 aaPredicted RBP23.4■■□□□ 1.34
SREBF1-212ENST00000478616 FOXN1O15353 648 aa23.4■■□□□ 1.34
SREBF1-212ENST00000478616 GNAI2P04899 355 aa23.4■■□□□ 1.34
SREBF1-212ENST00000478616 SPDYE6P0CI01 402 aa23.4■■□□□ 1.34
SREBF1-212ENST00000478616 ADORA1P30542 326 aa23.4■■□□□ 1.34
SREBF1-212ENST00000478616 IL15P40933 162 aaPredicted RBP23.4■■□□□ 1.34
SREBF1-212ENST00000478616 MOB2Q70IA6 237 aa23.4■■□□□ 1.34
SREBF1-212ENST00000478616 HDAC9Q9UKV0 1011 aa23.4■■□□□ 1.34
SREBF1-212ENST00000478616 HUNKP57058 714 aa23.39■■□□□ 1.33
SREBF1-212ENST00000478616 COL13A1Q5TAT6 717 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-212ENST00000478616 DZIP1LQ8IYY4 767 aaKnown RBP23.39■■□□□ 1.33
SREBF1-212ENST00000478616 PANK1Q8TE04 598 aa23.39■■□□□ 1.33
SREBF1-212ENST00000478616 C1orf115Q9H7X2 142 aa23.39■■□□□ 1.33
SREBF1-212ENST00000478616 CHAF1AQ13111 956 aaPredicted RBP23.38■■□□□ 1.33
SREBF1-212ENST00000478616 POLA2Q14181 598 aa23.38■■□□□ 1.33
SREBF1-212ENST00000478616 ATP2B3Q16720 1220 aa23.38■■□□□ 1.33
SREBF1-212ENST00000478616 IFIT1P09914 478 aaKnown RBP23.37■■□□□ 1.33
SREBF1-212ENST00000478616 DLGAP5Q15398 846 aa23.37■■□□□ 1.33
SREBF1-212ENST00000478616 CEP126Q9P2H0 1117 aa23.37■■□□□ 1.33
SREBF1-212ENST00000478616 TTF2Q9UNY4 1162 aaKnown RBP23.37■■□□□ 1.33
SREBF1-212ENST00000478616 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
SREBF1-212ENST00000478616 CLRN2A0PK11 232 aa23.36■■□□□ 1.33
SREBF1-212ENST00000478616 SLC5A1P13866 664 aa23.36■■□□□ 1.33
SREBF1-212ENST00000478616 PHKA1P46020 1223 aa23.36■■□□□ 1.33
SREBF1-212ENST00000478616 TFCP2Q12800 502 aa23.36■■□□□ 1.33
SREBF1-212ENST00000478616 GRM1Q13255 1194 aa23.36■■□□□ 1.33
SREBF1-212ENST00000478616 CAVIN4Q5BKX8 364 aa23.36■■□□□ 1.33
SREBF1-212ENST00000478616 TIMM10P62072 90 aa23.35■■□□□ 1.33
SREBF1-212ENST00000478616 PAXIP1Q6ZW49 1069 aaPredicted RBP23.35■■□□□ 1.33
SREBF1-212ENST00000478616 FZD1Q9UP38 647 aa23.35■■□□□ 1.33
SREBF1-212ENST00000478616 OTOFQ9HC10 1997 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 ZBTB22O15209 634 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 ECE1P42892 770 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 RGMBQ6NW40 437 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 VPS37DQ86XT2 251 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 CDAN1Q8IWY9 1227 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 C2orf69Q8N8R5 385 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 SSH3Q8TE77 659 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 SERPINA10Q9UK55 444 aa23.34■■□□□ 1.33
SREBF1-212ENST00000478616 CRKP46108 304 aa23.33■■□□□ 1.33
SREBF1-212ENST00000478616 ATP8B2P98198 1209 aa23.33■■□□□ 1.33
SREBF1-212ENST00000478616 SPDYE2Q495Y8 402 aa23.33■■□□□ 1.33
SREBF1-212ENST00000478616 APOBEC3FQ8IUX4 373 aaKnown RBP23.33■■□□□ 1.33
SREBF1-212ENST00000478616 ITPRIPQ8IWB1 547 aa23.33■■□□□ 1.33
SREBF1-212ENST00000478616 AKAP11Q9UKA4 1901 aa23.33■■□□□ 1.32
SREBF1-212ENST00000478616 MAP2K2P36507 400 aa23.32■■□□□ 1.32
SREBF1-212ENST00000478616 DEFB129Q9H1M3 183 aa23.32■■□□□ 1.32
SREBF1-212ENST00000478616 LAMB1P07942 1786 aa23.32■■□□□ 1.32
SREBF1-212ENST00000478616 A0A1B0GUL7 405 aa23.31■■□□□ 1.32
SREBF1-212ENST00000478616 UBE2Q2LH0YL09 131 aa23.31■■□□□ 1.32
SREBF1-212ENST00000478616 HSPA8P11142 646 aaKnown RBP23.31■■□□□ 1.32
SREBF1-212ENST00000478616 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
SREBF1-212ENST00000478616 FTSJ3Q8IY81 847 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms