RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 AKAP11Q9UKA4 1901 aa28.75■■■□□ 2.19
C9orf3-216ENST00000478603 FKBP1BP68106 108 aa28.75■■■□□ 2.19
C9orf3-216ENST00000478603 PCDHAC2Q9Y5I4 1007 aa28.75■■■□□ 2.19
C9orf3-216ENST00000478603 ECM29Q5VYK3 1845 aa28.74■■■□□ 2.19
C9orf3-216ENST00000478603 UBE2Q2LH0YL09 131 aa28.74■■■□□ 2.19
C9orf3-216ENST00000478603 RASAL3Q86YV0 1011 aa28.74■■■□□ 2.19
C9orf3-216ENST00000478603 TRMT2AQ8IZ69 625 aaKnown RBP28.74■■■□□ 2.19
C9orf3-216ENST00000478603 USP44Q9H0E7 712 aa28.74■■■□□ 2.19
C9orf3-216ENST00000478603 SMC4Q9NTJ3 1288 aa28.74■■■□□ 2.19
C9orf3-216ENST00000478603 RIPOR2Q9Y4F9 1068 aa28.74■■■□□ 2.19
C9orf3-216ENST00000478603 GYG1P46976 350 aa28.73■■■□□ 2.19
C9orf3-216ENST00000478603 UBE4AQ14139 1066 aa28.73■■■□□ 2.19
C9orf3-216ENST00000478603 DLGAP5Q15398 846 aa28.73■■■□□ 2.19
C9orf3-216ENST00000478603 ALDH1L2Q3SY69 923 aa28.73■■■□□ 2.19
C9orf3-216ENST00000478603 TTLL12Q14166 644 aaPredicted RBP28.72■■■□□ 2.19
C9orf3-216ENST00000478603 LRRC24Q50LG9 513 aa28.72■■■□□ 2.19
C9orf3-216ENST00000478603 APOBEC3FQ8IUX4 373 aaKnown RBP28.72■■■□□ 2.19
C9orf3-216ENST00000478603 CCER2I3L3R5 266 aa28.71■■■□□ 2.19
C9orf3-216ENST00000478603 KLHDC4Q8TBB5 520 aa28.71■■■□□ 2.19
C9orf3-216ENST00000478603 ABHD8Q96I13 439 aa28.71■■■□□ 2.19
C9orf3-216ENST00000478603 MROH5Q6ZUA9 1318 aa28.7■■■□□ 2.19
C9orf3-216ENST00000478603 FKBP1AP62942 108 aaKnown RBP28.7■■■□□ 2.18
C9orf3-216ENST00000478603 CFAP100Q494V2 611 aa28.7■■■□□ 2.18
C9orf3-216ENST00000478603 FAM84BQ96KN1 310 aaPredicted RBP28.7■■■□□ 2.18
C9orf3-216ENST00000478603 CSRNP1Q96S65 589 aa28.7■■■□□ 2.18
C9orf3-216ENST00000478603 HIBADHP31937 336 aaKnown RBP28.69■■■□□ 2.18
C9orf3-216ENST00000478603 NF2P35240 595 aa28.69■■■□□ 2.18
C9orf3-216ENST00000478603 MTMR14Q8NCE2 650 aa28.69■■■□□ 2.18
C9orf3-216ENST00000478603 TDRD7Q8NHU6 1098 aaKnown RBP28.69■■■□□ 2.18
C9orf3-216ENST00000478603 PRKG1Q13976 671 aa28.68■■■□□ 2.18
C9orf3-216ENST00000478603 METTL24Q5JXM2 366 aa28.68■■■□□ 2.18
C9orf3-216ENST00000478603 RNF186Q9NXI6 227 aa28.68■■■□□ 2.18
C9orf3-216ENST00000478603 AOX1Q06278 1338 aa28.68■■■□□ 2.18
C9orf3-216ENST00000478603 FAM205AQ6ZU69 1335 aa28.68■■■□□ 2.18
C9orf3-216ENST00000478603 TRPA1O75762 1119 aa28.67■■■□□ 2.18
C9orf3-216ENST00000478603 CLRN2A0PK11 232 aa28.66■■■□□ 2.18
C9orf3-216ENST00000478603 SPDYE2BA6NHP3 402 aa28.66■■■□□ 2.18
C9orf3-216ENST00000478603 SPDYE6P0CI01 402 aa28.66■■■□□ 2.18
C9orf3-216ENST00000478603 MFSD14BQ5SR56 506 aa28.66■■■□□ 2.18
C9orf3-216ENST00000478603 PRMT6Q96LA8 375 aaPredicted RBP28.66■■■□□ 2.18
C9orf3-216ENST00000478603 DEFB129Q9H1M3 183 aa28.66■■■□□ 2.18
C9orf3-216ENST00000478603 SAGE1Q9NXZ1 904 aa28.66■■■□□ 2.18
C9orf3-216ENST00000478603 ARAP2Q8WZ64 1704 aa28.66■■■□□ 2.18
C9orf3-216ENST00000478603 RBM5P52756 815 aaKnown RBP eCLIP28.65■■■□□ 2.18
C9orf3-216ENST00000478603 VGLL2Q8N8G2 317 aa28.65■■■□□ 2.18
C9orf3-216ENST00000478603 NOB1Q9ULX3 412 aaKnown RBP28.65■■■□□ 2.18
C9orf3-216ENST00000478603 FZD1Q9UP38 647 aa28.65■■■□□ 2.18
C9orf3-216ENST00000478603 IQSEC3Q9UPP2 1182 aaPredicted RBP28.65■■■□□ 2.18
C9orf3-216ENST00000478603 MYO1BO43795 1136 aa28.63■■■□□ 2.17
C9orf3-216ENST00000478603 PTPN12Q05209 780 aaKnown RBP28.63■■■□□ 2.17
C9orf3-216ENST00000478603 ARMC9Q7Z3E5 817 aa28.63■■■□□ 2.17
C9orf3-216ENST00000478603 FBXO33Q7Z6M2 555 aa28.63■■■□□ 2.17
C9orf3-216ENST00000478603 VEZTQ9HBM0 779 aa28.63■■■□□ 2.17
C9orf3-216ENST00000478603 COL1A1P02452 1464 aaPredicted RBP28.63■■■□□ 2.17
C9orf3-216ENST00000478603 PDE8BO95263 885 aa28.62■■■□□ 2.17
C9orf3-216ENST00000478603 CT47B1P0C2W7 299 aaPredicted RBP28.62■■■□□ 2.17
C9orf3-216ENST00000478603 MKRN3Q13064 507 aaKnown RBP28.62■■■□□ 2.17
C9orf3-216ENST00000478603 VPS37DQ86XT2 251 aa28.62■■■□□ 2.17
C9orf3-216ENST00000478603 MCOLN1Q9GZU1 580 aa28.62■■■□□ 2.17
C9orf3-216ENST00000478603 ANGEL1Q9UNK9 670 aaKnown RBP28.62■■■□□ 2.17
C9orf3-216ENST00000478603 TTF2Q9UNY4 1162 aaKnown RBP28.62■■■□□ 2.17
C9orf3-216ENST00000478603 RFX5P48382 616 aaPredicted RBP28.61■■■□□ 2.17
C9orf3-216ENST00000478603 SSC5DA1L4H1 1573 aa28.6■■■□□ 2.17
C9orf3-216ENST00000478603 CHAF1AQ13111 956 aaPredicted RBP28.6■■■□□ 2.17
C9orf3-216ENST00000478603 REM2Q8IYK8 340 aaPredicted RBP28.6■■■□□ 2.17
C9orf3-216ENST00000478603 DGKZQ13574 1117 aa28.59■■■□□ 2.17
C9orf3-216ENST00000478603 GRIK5Q16478 980 aa28.59■■■□□ 2.17
C9orf3-216ENST00000478603 CAVIN4Q5BKX8 364 aa28.59■■■□□ 2.17
C9orf3-216ENST00000478603 UBTFL1P0CB47 393 aaPredicted RBP28.58■■■□□ 2.17
C9orf3-216ENST00000478603 BCAMP50895 628 aa28.58■■■□□ 2.17
C9orf3-216ENST00000478603 LDLRAD1Q5T700 205 aa28.58■■■□□ 2.17
C9orf3-216ENST00000478603 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.58■■■□□ 2.17
C9orf3-216ENST00000478603 PPP2R3BQ9Y5P8 575 aa28.58■■■□□ 2.17
C9orf3-216ENST00000478603 CCDC85CA6NKD9 419 aa28.57■■■□□ 2.16
C9orf3-216ENST00000478603 EYA2O00167 538 aa28.57■■■□□ 2.16
C9orf3-216ENST00000478603 FRAT2O75474 233 aaPredicted RBP28.57■■■□□ 2.16
C9orf3-216ENST00000478603 RARSP54136 660 aaKnown RBP28.57■■■□□ 2.16
C9orf3-216ENST00000478603 API5Q9BZZ5 524 aaKnown RBP28.57■■■□□ 2.16
C9orf3-216ENST00000478603 SERPINA10Q9UK55 444 aa28.57■■■□□ 2.16
C9orf3-216ENST00000478603 FGFR2P21802 821 aa28.56■■■□□ 2.16
C9orf3-216ENST00000478603 PUM3Q15397 648 aaKnown RBP28.56■■■□□ 2.16
C9orf3-216ENST00000478603 NBPF12Q5TAG4 269 aaPredicted RBP28.56■■■□□ 2.16
C9orf3-216ENST00000478603 TDRD3Q9H7E2 651 aaKnown RBP28.56■■■□□ 2.16
C9orf3-216ENST00000478603 ZNF70Q9UC06 446 aaPredicted RBP28.56■■■□□ 2.16
C9orf3-216ENST00000478603 RASA3Q14644 834 aa28.55■■■□□ 2.16
C9orf3-216ENST00000478603 SPDYE2Q495Y8 402 aa28.55■■■□□ 2.16
C9orf3-216ENST00000478603 MYH13Q9UKX3 1938 aa28.55■■■□□ 2.16
C9orf3-216ENST00000478603 CRKP46108 304 aa28.54■■■□□ 2.16
C9orf3-216ENST00000478603 DZIP1LQ8IYY4 767 aaKnown RBP28.54■■■□□ 2.16
C9orf3-216ENST00000478603 SIL1Q9H173 461 aa28.54■■■□□ 2.16
C9orf3-216ENST00000478603 IFIT1P09914 478 aaKnown RBP28.53■■■□□ 2.16
C9orf3-216ENST00000478603 MAP3K11Q16584 847 aa28.53■■■□□ 2.16
C9orf3-216ENST00000478603 SUPT20HL1Q3ZLR7 823 aa28.53■■■□□ 2.16
C9orf3-216ENST00000478603 ATG9AQ7Z3C6 839 aa28.53■■■□□ 2.16
C9orf3-216ENST00000478603 CLMNQ96JQ2 1002 aa28.53■■■□□ 2.16
C9orf3-216ENST00000478603 LRRFIP2Q9Y608 721 aaKnown RBP28.53■■■□□ 2.16
C9orf3-216ENST00000478603 PPP1R12BO60237 982 aaPredicted RBP28.52■■■□□ 2.16
C9orf3-216ENST00000478603 TBC1D8O95759 1140 aa28.52■■■□□ 2.16
C9orf3-216ENST00000478603 TM4SF4P48230 202 aa28.52■■■□□ 2.16
C9orf3-216ENST00000478603 SPRYD7Q5W111 196 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms