RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 HOXA10P31260 410 aaPredicted RBP7.26□□□□□ -1.25
HPS3-205ENST00000478525 C19orf57Q0VDD7 668 aa7.26□□□□□ -1.25
HPS3-205ENST00000478525 SGO2Q562F6 1265 aa7.26□□□□□ -1.25
HPS3-205ENST00000478525 MFSD14AQ96MC6 490 aa7.26□□□□□ -1.25
HPS3-205ENST00000478525 WNT11O96014 354 aa7.25□□□□□ -1.25
HPS3-205ENST00000478525 MPSTP25325 297 aa7.25□□□□□ -1.25
HPS3-205ENST00000478525 MAP4P27816 1152 aaKnown RBP7.25□□□□□ -1.25
HPS3-205ENST00000478525 C8orf34Q49A92 452 aa7.25□□□□□ -1.25
HPS3-205ENST00000478525 TMEM102Q8N9M5 508 aaPredicted RBP7.25□□□□□ -1.25
HPS3-205ENST00000478525 ZKSCAN3Q9BRR0 538 aa7.25□□□□□ -1.25
HPS3-205ENST00000478525 MEGF11A6BM72 1044 aa7.24□□□□□ -1.25
HPS3-205ENST00000478525 PCSK2P16519 638 aa7.24□□□□□ -1.25
HPS3-205ENST00000478525 MZF1P28698 734 aaPredicted RBP7.24□□□□□ -1.25
HPS3-205ENST00000478525 EIF1AXP47813 144 aaKnown RBP7.24□□□□□ -1.25
HPS3-205ENST00000478525 ARL4DP49703 201 aa7.24□□□□□ -1.25
HPS3-205ENST00000478525 NOM1Q5C9Z4 860 aaKnown RBP7.24□□□□□ -1.25
HPS3-205ENST00000478525 VN1R5Q7Z5H4 357 aa7.24□□□□□ -1.25
HPS3-205ENST00000478525 NXPE3Q969Y0 559 aa7.24□□□□□ -1.25
HPS3-205ENST00000478525 RNF114Q9Y508 228 aa7.24□□□□□ -1.25
HPS3-205ENST00000478525 SOX1O00570 391 aaPredicted RBP7.23□□□□□ -1.25
HPS3-205ENST00000478525 EREGO14944 169 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 IKBKEQ14164 716 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 OSMRQ99650 979 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 USP26Q9BXU7 913 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 TMPRSS13Q9BYE2 586 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 PIM2Q9P1W9 311 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 ADGRE2Q9UHX3 823 aa7.23□□□□□ -1.25
HPS3-205ENST00000478525 LOC100289279A0A1B0GTE1 492 aa7.22□□□□□ -1.25
HPS3-205ENST00000478525 TIAF1O95411 115 aa7.22□□□□□ -1.25
HPS3-205ENST00000478525 F13BP05160 661 aa7.22□□□□□ -1.25
HPS3-205ENST00000478525 NUTM2GQ5VZR2 741 aa7.22□□□□□ -1.25
HPS3-205ENST00000478525 PMEPA1Q969W9 287 aa7.22□□□□□ -1.25
HPS3-205ENST00000478525 POLIQ9UNA4 740 aa7.22□□□□□ -1.25
HPS3-205ENST00000478525 DLGAP3O95886 979 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 RXRBP28702 533 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 MTMR3Q13615 1198 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 MSMPQ1L6U9 139 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 SHISA5Q8N114 240 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 FBXL6Q8N531 539 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 SMG8Q8ND04 991 aaKnown RBP7.21□□□□□ -1.26
HPS3-205ENST00000478525 TTC16Q8NEE8 873 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 SUGCTQ9HAC7 445 aa7.21□□□□□ -1.26
HPS3-205ENST00000478525 PHACTR2O75167 634 aa7.2□□□□□ -1.26
HPS3-205ENST00000478525 TNFRSF21O75509 655 aa7.2□□□□□ -1.26
HPS3-205ENST00000478525 YBX3P16989 372 aaKnown RBP eCLIP7.2□□□□□ -1.26
HPS3-205ENST00000478525 ABI1Q8IZP0 508 aa7.2□□□□□ -1.26
HPS3-205ENST00000478525 C12orf50Q8NA57 414 aaPredicted RBP7.2□□□□□ -1.26
HPS3-205ENST00000478525 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
HPS3-205ENST00000478525 CCDC97Q96F63 343 aaPredicted RBP7.2□□□□□ -1.26
HPS3-205ENST00000478525 BHLHE41Q9C0J9 482 aaPredicted RBP7.2□□□□□ -1.26
HPS3-205ENST00000478525 ATG3Q9NT62 314 aa7.2□□□□□ -1.26
HPS3-205ENST00000478525 FOXD3Q9UJU5 478 aaPredicted RBP7.2□□□□□ -1.26
HPS3-205ENST00000478525 LEMD3Q9Y2U8 911 aa7.2□□□□□ -1.26
HPS3-205ENST00000478525 EDN3P14138 238 aa7.19□□□□□ -1.26
HPS3-205ENST00000478525 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
HPS3-205ENST00000478525 ASAP3Q8TDY4 903 aa7.19□□□□□ -1.26
HPS3-205ENST00000478525 SNX29Q8TEQ0 813 aa7.19□□□□□ -1.26
HPS3-205ENST00000478525 OSBPL1AQ9BXW6 950 aa7.19□□□□□ -1.26
HPS3-205ENST00000478525 SOX17Q9H6I2 414 aaPredicted RBP7.19□□□□□ -1.26
HPS3-205ENST00000478525 CYP4F12Q9HCS2 524 aa7.19□□□□□ -1.26
HPS3-205ENST00000478525 LATS2Q9NRM7 1088 aa7.19□□□□□ -1.26
HPS3-205ENST00000478525 ESRRAP11474 423 aaPredicted RBP7.18□□□□□ -1.26
HPS3-205ENST00000478525 DRD2P14416 443 aa7.18□□□□□ -1.26
HPS3-205ENST00000478525 FOSL1P15407 271 aa7.18□□□□□ -1.26
HPS3-205ENST00000478525 PEAR1Q5VY43 1037 aaPredicted RBP7.18□□□□□ -1.26
HPS3-205ENST00000478525 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
HPS3-205ENST00000478525 NFXL1Q6ZNB6 911 aa7.18□□□□□ -1.26
HPS3-205ENST00000478525 GIMAP7Q8NHV1 300 aa7.18□□□□□ -1.26
HPS3-205ENST00000478525 FBLIM1Q8WUP2 373 aa7.18□□□□□ -1.26
HPS3-205ENST00000478525 FAM95CA0A1B0GW59 222 aa7.17□□□□□ -1.26
HPS3-205ENST00000478525 METTL12A8MUP2 240 aa7.17□□□□□ -1.26
HPS3-205ENST00000478525 NFKBIBQ15653 356 aa7.17□□□□□ -1.26
HPS3-205ENST00000478525 CPSF6Q16630 551 aaKnown RBP eCLIP7.17□□□□□ -1.26
HPS3-205ENST00000478525 ALKBH2Q6NS38 261 aa7.17□□□□□ -1.26
HPS3-205ENST00000478525 C2CD4AQ8NCU7 369 aaPredicted RBP7.17□□□□□ -1.26
HPS3-205ENST00000478525 NRSN2Q9GZP1 204 aa7.17□□□□□ -1.26
HPS3-205ENST00000478525 CCDC39Q9UFE4 941 aa7.17□□□□□ -1.26
HPS3-205ENST00000478525 ANGEL1Q9UNK9 670 aaKnown RBP7.17□□□□□ -1.26
HPS3-205ENST00000478525 GSTM4Q03013 218 aa7.16□□□□□ -1.26
HPS3-205ENST00000478525 PAOXQ6QHF9 649 aa7.16□□□□□ -1.26
HPS3-205ENST00000478525 SERPINA10Q9UK55 444 aa7.16□□□□□ -1.26
HPS3-205ENST00000478525 PRNPP04156 253 aa7.15□□□□□ -1.26
HPS3-205ENST00000478525 NPR3P17342 541 aa7.15□□□□□ -1.26
HPS3-205ENST00000478525 SSFA2P28290 1259 aa7.15□□□□□ -1.26
HPS3-205ENST00000478525 ADMP35318 185 aa7.15□□□□□ -1.26
HPS3-205ENST00000478525 USP11P51784 963 aa7.15□□□□□ -1.26
HPS3-205ENST00000478525 EXOSC6Q5RKV6 272 aaKnown RBP7.15□□□□□ -1.26
HPS3-205ENST00000478525 VSIG10LQ86VR7 867 aa7.15□□□□□ -1.26
HPS3-205ENST00000478525 AMOTL2Q9Y2J4 779 aa7.15□□□□□ -1.26
HPS3-205ENST00000478525 TMEM88BA6NKF7 163 aa7.14□□□□□ -1.27
HPS3-205ENST00000478525 FZD6O60353 706 aa7.14□□□□□ -1.27
HPS3-205ENST00000478525 SOX4Q06945 474 aaPredicted RBP7.14□□□□□ -1.27
HPS3-205ENST00000478525 AAMPQ13685 434 aa7.14□□□□□ -1.27
HPS3-205ENST00000478525 ZAR1Q86SH2 424 aa7.14□□□□□ -1.27
HPS3-205ENST00000478525 EZH1Q92800 747 aaPredicted RBP7.14□□□□□ -1.27
HPS3-205ENST00000478525 TBC1D32Q96NH3 1257 aa7.14□□□□□ -1.27
HPS3-205ENST00000478525 METTL22Q9BUU2 404 aaPredicted RBP7.14□□□□□ -1.27
HPS3-205ENST00000478525 PRKAG2Q9UGJ0 569 aa7.14□□□□□ -1.27
HPS3-205ENST00000478525 ADH5P11766 374 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms