RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 ZFYVE28Q9HCC9 887 aa6.64□□□□□ -1.35
GPNMB-210ENST00000478451 SH2B1Q9NRF2 756 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-210ENST00000478451 BAZ1AQ9NRL2 1556 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-210ENST00000478451 PDE3BQ13370 1112 aa6.63□□□□□ -1.35
GPNMB-210ENST00000478451 FAM117BQ6P1L5 589 aa6.63□□□□□ -1.35
GPNMB-210ENST00000478451 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
GPNMB-210ENST00000478451 WFDC12Q8WWY7 111 aa6.63□□□□□ -1.35
GPNMB-210ENST00000478451 CARD10Q9BWT7 1032 aa6.63□□□□□ -1.35
GPNMB-210ENST00000478451 MRPL18Q9H0U6 180 aaKnown RBP6.63□□□□□ -1.35
GPNMB-210ENST00000478451 LATS2Q9NRM7 1088 aa6.63□□□□□ -1.35
GPNMB-210ENST00000478451 H3BRJ5 948 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 FSCN2O14926 492 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 POLR3DP05423 398 aaPredicted RBP6.62□□□□□ -1.35
GPNMB-210ENST00000478451 NOS3P29474 1203 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 IREB2P48200 963 aaKnown RBP6.62□□□□□ -1.35
GPNMB-210ENST00000478451 CABP4P57796 275 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 PEAR1Q5VY43 1037 aaPredicted RBP6.62□□□□□ -1.35
GPNMB-210ENST00000478451 CITED4Q96RK1 184 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 TRAIPQ9BWF2 469 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 PCMTD2Q9NV79 361 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 SOX13Q9UN79 622 aa6.62□□□□□ -1.35
GPNMB-210ENST00000478451 GPR182O15218 404 aa6.61□□□□□ -1.35
GPNMB-210ENST00000478451 NEFLP07196 543 aa6.61□□□□□ -1.35
GPNMB-210ENST00000478451 TAL1P17542 331 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-210ENST00000478451 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-210ENST00000478451 JAG1P78504 1218 aa6.61□□□□□ -1.35
GPNMB-210ENST00000478451 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
GPNMB-210ENST00000478451 TMC1Q8TDI8 760 aa6.61□□□□□ -1.35
GPNMB-210ENST00000478451 NXPE3Q969Y0 559 aa6.61□□□□□ -1.35
GPNMB-210ENST00000478451 BHLHE41Q9C0J9 482 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-210ENST00000478451 AKTIPQ9H8T0 292 aa6.61□□□□□ -1.35
GPNMB-210ENST00000478451 BIN2Q9UBW5 565 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-210ENST00000478451 F8W735 103 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-210ENST00000478451 TM4SF5O14894 197 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 PIP4K2BP78356 416 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 ORC1Q13415 861 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 USPL1Q5W0Q7 1092 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 BSNDQ8WZ55 320 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 WNT8BQ93098 351 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 TP53INP1Q96A56 240 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 MEGF10Q96KG7 1140 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-210ENST00000478451 RBCK1Q9BYM8 510 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 SEC31BQ9NQW1 1179 aa6.6□□□□□ -1.35
GPNMB-210ENST00000478451 WIZO95785 1651 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 CPNE3O75131 537 aaKnown RBP6.59□□□□□ -1.35
GPNMB-210ENST00000478451 WISP1O95388 367 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 IGHA2P01877 340 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 KCNA1Q09470 495 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
GPNMB-210ENST00000478451 TMEM130Q8N3G9 435 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 ASAP3Q8TDY4 903 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 IVNS1ABPQ9Y6Y0 642 aa6.59□□□□□ -1.35
GPNMB-210ENST00000478451 UNC13AQ9UPW8 1703 aa6.59□□□□□ -1.36
GPNMB-210ENST00000478451 A0A1W2PP55 124 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 ADAM11O75078 769 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 ALX3O95076 343 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 ACAD11Q709F0 780 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 SLC51AQ86UW1 340 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 AGGF1Q8N302 714 aaeCLIP6.58□□□□□ -1.36
GPNMB-210ENST00000478451 FOXD4L4Q8WXT5 416 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-210ENST00000478451 SLC7A3Q8WY07 619 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 KLHDC7BQ96G42 594 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 DMRTB1Q96MA1 342 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 NIF3L1Q9GZT8 377 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 OSGEPQ9NPF4 335 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 DCTN4Q9UJW0 460 aa6.58□□□□□ -1.36
GPNMB-210ENST00000478451 METTL12A8MUP2 240 aa6.57□□□□□ -1.36
GPNMB-210ENST00000478451 DDX3YO15523 660 aaKnown RBP6.57□□□□□ -1.36
GPNMB-210ENST00000478451 Q6ZS46 218 aa6.57□□□□□ -1.36
GPNMB-210ENST00000478451 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
GPNMB-210ENST00000478451 AEBP1Q8IUX7 1158 aa6.57□□□□□ -1.36
GPNMB-210ENST00000478451 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
GPNMB-210ENST00000478451 ALKBH8Q96BT7 664 aaKnown RBP6.57□□□□□ -1.36
GPNMB-210ENST00000478451 LIN7BQ9HAP6 207 aa6.57□□□□□ -1.36
GPNMB-210ENST00000478451 NPHS2Q9NP85 383 aa6.57□□□□□ -1.36
GPNMB-210ENST00000478451 EIF4G1Q04637 1599 aaKnown RBP6.57□□□□□ -1.36
GPNMB-210ENST00000478451 LOC105371045A0A1W2PR82 267 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 EIF1AYO14602 144 aaKnown RBP6.56□□□□□ -1.36
GPNMB-210ENST00000478451 GLB1P16278 677 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 MAPK1P28482 360 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 ARL4DP49703 201 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 NLRP12P59046 1061 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 C19orf57Q0VDD7 668 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 IKBKEQ14164 716 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 DUOXA2Q1HG44 320 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 HGSNATQ68CP4 663 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 TMC7Q7Z402 723 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 CCNJLQ8IV13 435 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 DZIP1LQ8IYY4 767 aaKnown RBP6.56□□□□□ -1.36
GPNMB-210ENST00000478451 DNAJC25Q9H1X3 360 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 MROH2BQ7Z745 1585 aa6.56□□□□□ -1.36
GPNMB-210ENST00000478451 KIAA0319Q5VV43 1072 aa6.55□□□□□ -1.36
GPNMB-210ENST00000478451 CSRNP1Q96S65 589 aa6.55□□□□□ -1.36
GPNMB-210ENST00000478451 TCF12Q99081 682 aa6.55□□□□□ -1.36
GPNMB-210ENST00000478451 PODXL2Q9NZ53 605 aa6.55□□□□□ -1.36
GPNMB-210ENST00000478451 A0A096LPE4 126 aa6.54□□□□□ -1.36
GPNMB-210ENST00000478451 A0A1W2PPZ6 126 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms