RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-222ENST00000477937 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
HDAC7-222ENST00000477937 FOXN1O15353 648 aa17.25■□□□□ 0.35
HDAC7-222ENST00000477937 BCAR3O75815 825 aa17.25■□□□□ 0.35
HDAC7-222ENST00000477937 MAP2K2P36507 400 aa17.25■□□□□ 0.35
HDAC7-222ENST00000477937 RFX5P48382 616 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-222ENST00000477937 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
HDAC7-222ENST00000477937 COL13A1Q5TAT6 717 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-222ENST00000477937 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
HDAC7-222ENST00000477937 VGLL2Q8N8G2 317 aa17.25■□□□□ 0.35
HDAC7-222ENST00000477937 FAM205AQ6ZU69 1335 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-222ENST00000477937 EYA2O00167 538 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 GNAI3P08754 354 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
HDAC7-222ENST00000477937 DLGAP5Q15398 846 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 FBXO33Q7Z6M2 555 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 MEIS3Q99687 375 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 BEGAINQ9BUH8 593 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
HDAC7-222ENST00000477937 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
HDAC7-222ENST00000477937 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
HDAC7-222ENST00000477937 TRIM27P14373 513 aa17.23■□□□□ 0.35
HDAC7-222ENST00000477937 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
HDAC7-222ENST00000477937 PUM3Q15397 648 aaKnown RBP17.23■□□□□ 0.35
HDAC7-222ENST00000477937 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
HDAC7-222ENST00000477937 RGMBQ6NW40 437 aa17.23■□□□□ 0.35
HDAC7-222ENST00000477937 FBXO3Q9UK99 471 aa17.23■□□□□ 0.35
HDAC7-222ENST00000477937 SCAF8Q9UPN6 1271 aaKnown RBP17.23■□□□□ 0.35
HDAC7-222ENST00000477937 ARAP2Q8WZ64 1704 aa17.22■□□□□ 0.35
HDAC7-222ENST00000477937 AOC2O75106 756 aa17.22■□□□□ 0.35
HDAC7-222ENST00000477937 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-222ENST00000477937 IFIT1P09914 478 aaKnown RBP17.22■□□□□ 0.35
HDAC7-222ENST00000477937 MFSD14BQ5SR56 506 aa17.22■□□□□ 0.35
HDAC7-222ENST00000477937 APOBEC3FQ8IUX4 373 aaKnown RBP17.22■□□□□ 0.35
HDAC7-222ENST00000477937 MTMR14Q8NCE2 650 aa17.22■□□□□ 0.35
HDAC7-222ENST00000477937 ZBED3Q96IU2 234 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-222ENST00000477937 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 PAPPA2Q9BXP8 1791 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 FGFR2P21802 821 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 FKBP1BP68106 108 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 NOGQ13253 232 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 CFAP100Q494V2 611 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
HDAC7-222ENST00000477937 MYO1BO43795 1136 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 CIAO1O76071 339 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 SLC5A1P13866 664 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 NF2P35240 595 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 BCAMP50895 628 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 ZNF157P51786 506 aaPredicted RBP17.2■□□□□ 0.34
HDAC7-222ENST00000477937 RBM5P52756 815 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDAC7-222ENST00000477937 PRAMEF18Q5VWM3 479 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 SIL1Q9H173 461 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 CEP126Q9P2H0 1117 aa17.2■□□□□ 0.34
HDAC7-222ENST00000477937 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
HDAC7-222ENST00000477937 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-222ENST00000477937 TBC1D22AQ8WUA7 517 aa17.19■□□□□ 0.34
HDAC7-222ENST00000477937 LPIN2Q92539 896 aa17.19■□□□□ 0.34
HDAC7-222ENST00000477937 PRDM10Q9NQV6 1147 aa17.19■□□□□ 0.34
HDAC7-222ENST00000477937 TTF2Q9UNY4 1162 aaKnown RBP17.19■□□□□ 0.34
HDAC7-222ENST00000477937 TNNQ9UQP3 1299 aa17.19■□□□□ 0.34
HDAC7-222ENST00000477937 AKAP11Q9UKA4 1901 aa17.18■□□□□ 0.34
HDAC7-222ENST00000477937 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
HDAC7-222ENST00000477937 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
HDAC7-222ENST00000477937 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-222ENST00000477937 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
HDAC7-222ENST00000477937 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-222ENST00000477937 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
HDAC7-222ENST00000477937 SERPINA10Q9UK55 444 aa17.18■□□□□ 0.34
HDAC7-222ENST00000477937 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
HDAC7-222ENST00000477937 GNAI2P04899 355 aa17.17■□□□□ 0.34
HDAC7-222ENST00000477937 LBX1P52954 281 aa17.17■□□□□ 0.34
HDAC7-222ENST00000477937 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
HDAC7-222ENST00000477937 PA2G4Q9UQ80 394 aaKnown RBP17.17■□□□□ 0.34
HDAC7-222ENST00000477937 PCDHAC2Q9Y5I4 1007 aa17.17■□□□□ 0.34
HDAC7-222ENST00000477937 FAM155AB1AL88 458 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-222ENST00000477937 CA12O43570 354 aa17.16■□□□□ 0.34
HDAC7-222ENST00000477937 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
HDAC7-222ENST00000477937 MTX1Q13505 466 aa17.16■□□□□ 0.34
HDAC7-222ENST00000477937 ATP2B3Q16720 1220 aa17.16■□□□□ 0.34
HDAC7-222ENST00000477937 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
HDAC7-222ENST00000477937 DEFB129Q9H1M3 183 aa17.16■□□□□ 0.34
HDAC7-222ENST00000477937 COL1A1P02452 1464 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-222ENST00000477937 CLRN2A0PK11 232 aa17.15■□□□□ 0.34
HDAC7-222ENST00000477937 SLC10A3P09131 477 aa17.15■□□□□ 0.34
HDAC7-222ENST00000477937 MOB2Q70IA6 237 aa17.15■□□□□ 0.34
HDAC7-222ENST00000477937 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
HDAC7-222ENST00000477937 VEZTQ9HBM0 779 aa17.15■□□□□ 0.34
HDAC7-222ENST00000477937 PPP2R3BQ9Y5P8 575 aa17.15■□□□□ 0.34
HDAC7-222ENST00000477937 UBE2Q2LH0YL09 131 aa17.14■□□□□ 0.33
HDAC7-222ENST00000477937 HDLBPQ00341 1268 aaKnown RBP17.14■□□□□ 0.33
HDAC7-222ENST00000477937 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
HDAC7-222ENST00000477937 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
HDAC7-222ENST00000477937 ZIC5Q96T25 663 aa17.14■□□□□ 0.33
HDAC7-222ENST00000477937 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
HDAC7-222ENST00000477937 SUGT1Q9Y2Z0 365 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms