RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TTC39AQ5SRH9 613 aa24.42■■□□□ 1.5
ACTB-210ENST00000477812 STRIP1Q5VSL9 837 aa24.42■■□□□ 1.5
ACTB-210ENST00000477812 HMG20BQ9P0W2 317 aa24.42■■□□□ 1.5
ACTB-210ENST00000477812 ZBTB47Q9UFB7 747 aaPredicted RBP24.42■■□□□ 1.5
ACTB-210ENST00000477812 USP17L3A6NCW0 530 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 USP17L4A6NCW7 530 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 PSMD14O00487 310 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 VIL1P09327 827 aaKnown RBP24.41■■□□□ 1.5
ACTB-210ENST00000477812 EIF6P56537 245 aaKnown RBP24.41■■□□□ 1.5
ACTB-210ENST00000477812 GTF2IP78347 998 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 CIAPIN1Q6FI81 312 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 PI16Q6UXB8 463 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 USP17L1Q7RTZ2 530 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.41■■□□□ 1.5
ACTB-210ENST00000477812 ECHDC1Q9NTX5 307 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 STAP2Q9UGK3 403 aa24.41■■□□□ 1.5
ACTB-210ENST00000477812 ATP5JP18859 108 aa24.4■■□□□ 1.5
ACTB-210ENST00000477812 MX1P20591 662 aa24.4■■□□□ 1.5
ACTB-210ENST00000477812 TSHZ3Q63HK5 1081 aa24.4■■□□□ 1.5
ACTB-210ENST00000477812 TTLL5Q6EMB2 1281 aa24.4■■□□□ 1.5
ACTB-210ENST00000477812 DENND2AQ9ULE3 1009 aa24.4■■□□□ 1.5
ACTB-210ENST00000477812 JAG2Q9Y219 1238 aa24.4■■□□□ 1.5
ACTB-210ENST00000477812 TTC41PQ6P2S7 1318 aa24.39■■□□□ 1.5
ACTB-210ENST00000477812 CERS5Q8N5B7 392 aa24.39■■□□□ 1.49
ACTB-210ENST00000477812 SPATA5Q8NB90 893 aa24.39■■□□□ 1.49
ACTB-210ENST00000477812 PI4K2BQ8TCG2 481 aa24.39■■□□□ 1.49
ACTB-210ENST00000477812 PDE1AP54750 535 aa24.38■■□□□ 1.49
ACTB-210ENST00000477812 FKBP1AP62942 108 aaKnown RBP24.38■■□□□ 1.49
ACTB-210ENST00000477812 TNIP1Q15025 636 aa24.38■■□□□ 1.49
ACTB-210ENST00000477812 PLEKHM2Q8IWE5 1019 aa24.38■■□□□ 1.49
ACTB-210ENST00000477812 GPC2Q8N158 579 aa24.38■■□□□ 1.49
ACTB-210ENST00000477812 GMLQ99445 158 aa24.38■■□□□ 1.49
ACTB-210ENST00000477812 MXD3Q9BW11 206 aa24.38■■□□□ 1.49
ACTB-210ENST00000477812 SALL1Q9NSC2 1324 aa24.37■■□□□ 1.49
ACTB-210ENST00000477812 FRAT2O75474 233 aaPredicted RBP24.37■■□□□ 1.49
ACTB-210ENST00000477812 CHAF1AQ13111 956 aaPredicted RBP24.37■■□□□ 1.49
ACTB-210ENST00000477812 RSBN1LQ6PCB5 846 aaPredicted RBP24.37■■□□□ 1.49
ACTB-210ENST00000477812 GPATCH3Q96I76 525 aa24.37■■□□□ 1.49
ACTB-210ENST00000477812 GLTPD2A6NH11 291 aa24.36■■□□□ 1.49
ACTB-210ENST00000477812 DDNO94850 711 aaPredicted RBP24.36■■□□□ 1.49
ACTB-210ENST00000477812 OSBPL3Q9H4L5 887 aa24.36■■□□□ 1.49
ACTB-210ENST00000477812 SNRKQ9NRH2 765 aa24.36■■□□□ 1.49
ACTB-210ENST00000477812 AOX1Q06278 1338 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 ZAP70P43403 619 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 GRIK5Q16478 980 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 MFSD14BQ5SR56 506 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 WDR66Q8TBY9 1149 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 TBC1D22AQ8WUA7 517 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 HAUS7Q99871 368 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 ZBTB12Q9Y330 459 aaPredicted RBP24.35■■□□□ 1.49
ACTB-210ENST00000477812 GTF3C3Q9Y5Q9 886 aa24.35■■□□□ 1.49
ACTB-210ENST00000477812 CYP2E1P05181 493 aaPredicted RBP24.34■■□□□ 1.49
ACTB-210ENST00000477812 SKAP1Q86WV1 359 aa24.34■■□□□ 1.49
ACTB-210ENST00000477812 FBXW7Q969H0 707 aa24.34■■□□□ 1.49
ACTB-210ENST00000477812 L3MBTL3Q96JM7 780 aaPredicted RBP24.34■■□□□ 1.49
ACTB-210ENST00000477812 BOLA2Q9H3K6 86 aa24.34■■□□□ 1.49
ACTB-210ENST00000477812 GJA3Q9Y6H8 435 aa24.34■■□□□ 1.49
ACTB-210ENST00000477812 NDUFB9Q9Y6M9 179 aa24.34■■□□□ 1.49
ACTB-210ENST00000477812 MYO3BQ8WXR4 1341 aa24.34■■□□□ 1.49
ACTB-210ENST00000477812 GLRX3O76003 335 aaKnown RBP24.33■■□□□ 1.49
ACTB-210ENST00000477812 RPS12P25398 132 aaKnown RBP24.33■■□□□ 1.49
ACTB-210ENST00000477812 GMPSP49915 693 aaPredicted RBP24.33■■□□□ 1.49
ACTB-210ENST00000477812 SCNN1DP51172 638 aa24.33■■□□□ 1.49
ACTB-210ENST00000477812 AGBL3Q8NEM8 1001 aa24.33■■□□□ 1.49
ACTB-210ENST00000477812 WDR90Q96KV7 1748 aa24.32■■□□□ 1.48
ACTB-210ENST00000477812 DPY19L2Q6NUT2 758 aa24.32■■□□□ 1.48
ACTB-210ENST00000477812 ERC2O15083 957 aa24.31■■□□□ 1.48
ACTB-210ENST00000477812 TBC1D9Q6ZT07 1266 aa24.31■■□□□ 1.48
ACTB-210ENST00000477812 DPF2Q92785 391 aa24.31■■□□□ 1.48
ACTB-210ENST00000477812 EDC3Q96F86 508 aaKnown RBP24.31■■□□□ 1.48
ACTB-210ENST00000477812 ANTXR1Q9H6X2 564 aa24.31■■□□□ 1.48
ACTB-210ENST00000477812 PIH1D3Q9NQM4 214 aaKnown RBP24.31■■□□□ 1.48
ACTB-210ENST00000477812 SUGT1Q9Y2Z0 365 aa24.31■■□□□ 1.48
ACTB-210ENST00000477812 DOCK2Q92608 1830 aa24.31■■□□□ 1.48
ACTB-210ENST00000477812 PRDX5P30044 214 aa24.3■■□□□ 1.48
ACTB-210ENST00000477812 GPRC5DQ9NZD1 345 aa24.3■■□□□ 1.48
ACTB-210ENST00000477812 SHTN1A0MZ66 631 aa24.29■■□□□ 1.48
ACTB-210ENST00000477812 ZGPATQ8N5A5 531 aaKnown RBP24.29■■□□□ 1.48
ACTB-210ENST00000477812 DNAJC2Q99543 621 aaKnown RBP24.29■■□□□ 1.48
ACTB-210ENST00000477812 POTECB2RU33 542 aa24.28■■□□□ 1.48
ACTB-210ENST00000477812 GOLIM4O00461 696 aa24.28■■□□□ 1.48
ACTB-210ENST00000477812 ZNF280AP59817 542 aaPredicted RBP24.28■■□□□ 1.48
ACTB-210ENST00000477812 KIAA0825Q8IV33 1275 aa24.28■■□□□ 1.48
ACTB-210ENST00000477812 ZNF384Q8TF68 577 aa24.28■■□□□ 1.48
ACTB-210ENST00000477812 PAG1Q9NWQ8 432 aa24.28■■□□□ 1.48
ACTB-210ENST00000477812 MYO5AQ9Y4I1 1855 aaKnown RBP24.28■■□□□ 1.48
ACTB-210ENST00000477812 MAST2Q6P0Q8 1798 aa24.27■■□□□ 1.48
ACTB-210ENST00000477812 ABCF2Q9UG63 623 aa24.27■■□□□ 1.48
ACTB-210ENST00000477812 USP17L8P0C7I0 530 aa24.26■■□□□ 1.47
ACTB-210ENST00000477812 MICALL2Q8IY33 904 aa24.26■■□□□ 1.47
ACTB-210ENST00000477812 SCN4AP35499 1836 aa24.26■■□□□ 1.47
ACTB-210ENST00000477812 ADAMTSL1Q8N6G6 1762 aa24.25■■□□□ 1.47
ACTB-210ENST00000477812 F8W031 263 aaPredicted RBP24.25■■□□□ 1.47
ACTB-210ENST00000477812 LDHBP07195 334 aaKnown RBP24.25■■□□□ 1.47
ACTB-210ENST00000477812 TTF1Q15361 905 aaPredicted RBP24.25■■□□□ 1.47
ACTB-210ENST00000477812 SPTY2D1Q68D10 685 aaPredicted RBP24.25■■□□□ 1.47
ACTB-210ENST00000477812 CNOT7Q9UIV1 285 aaKnown RBP24.25■■□□□ 1.47
ACTB-210ENST00000477812 TTF2Q9UNY4 1162 aaKnown RBP24.25■■□□□ 1.47
ACTB-210ENST00000477812 IGSF3O75054 1194 aa24.24■■□□□ 1.47
ACTB-210ENST00000477812 GSPT1P15170 499 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms