RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 EXOC6Q8TAG9 804 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 RHPN1Q8TCX5 695 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 FBXW7Q969H0 707 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 DCTPP1Q9H773 170 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 FPGT-TNNI3KV9GXZ4 949 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 KIF3CO14782 793 aa16.14■□□□□ 0.17
TOP3A-205ENST00000477508 EPHX2P34913 555 aa16.14■□□□□ 0.17
TOP3A-205ENST00000477508 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-205ENST00000477508 CLASRPQ8N2M8 674 aaKnown RBP16.14■□□□□ 0.17
TOP3A-205ENST00000477508 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
TOP3A-205ENST00000477508 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-205ENST00000477508 ADARB2Q9NS39 739 aaKnown RBP16.14■□□□□ 0.17
TOP3A-205ENST00000477508 CNOT7Q9UIV1 285 aaKnown RBP16.14■□□□□ 0.17
TOP3A-205ENST00000477508 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-205ENST00000477508 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-205ENST00000477508 USP17L8P0C7I0 530 aa16.13■□□□□ 0.17
TOP3A-205ENST00000477508 ADORA1P30542 326 aa16.13■□□□□ 0.17
TOP3A-205ENST00000477508 CCDC102BQ68D86 513 aa16.13■□□□□ 0.17
TOP3A-205ENST00000477508 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
TOP3A-205ENST00000477508 GMLQ99445 158 aa16.13■□□□□ 0.17
TOP3A-205ENST00000477508 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
TOP3A-205ENST00000477508 ARAP2Q8WZ64 1704 aa16.13■□□□□ 0.17
TOP3A-205ENST00000477508 TOMM70O94826 608 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 CCDC158Q5M9N0 1113 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 MICALL2Q8IY33 904 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 LRRCC1Q9C099 1032 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
TOP3A-205ENST00000477508 HDAC9Q9UKV0 1011 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 SUGT1Q9Y2Z0 365 aa16.12■□□□□ 0.17
TOP3A-205ENST00000477508 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.12■□□□□ 0.17
TOP3A-205ENST00000477508 EPS15P42566 896 aa16.11■□□□□ 0.17
TOP3A-205ENST00000477508 PHKA1P46020 1223 aa16.11■□□□□ 0.17
TOP3A-205ENST00000477508 ZNF280AP59817 542 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-205ENST00000477508 EAF2Q96CJ1 260 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-205ENST00000477508 ZNF512BQ96KM6 892 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-205ENST00000477508 PDS5AQ29RF7 1337 aaKnown RBP16.11■□□□□ 0.17
TOP3A-205ENST00000477508 APBB1O00213 710 aa16.1■□□□□ 0.17
TOP3A-205ENST00000477508 CHAF1AQ13111 956 aaPredicted RBP16.1■□□□□ 0.17
TOP3A-205ENST00000477508 MFSD14BQ5SR56 506 aa16.1■□□□□ 0.17
TOP3A-205ENST00000477508 AACSQ86V21 672 aa16.1■□□□□ 0.17
TOP3A-205ENST00000477508 LDHDQ86WU2 507 aa16.1■□□□□ 0.17
TOP3A-205ENST00000477508 ZGPATQ8N5A5 531 aaKnown RBP16.1■□□□□ 0.17
TOP3A-205ENST00000477508 RBM46Q8TBY0 533 aaKnown RBP16.1■□□□□ 0.17
TOP3A-205ENST00000477508 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
TOP3A-205ENST00000477508 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
TOP3A-205ENST00000477508 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
TOP3A-205ENST00000477508 ARID4AP29374 1257 aaPredicted RBP16.09■□□□□ 0.17
TOP3A-205ENST00000477508 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
TOP3A-205ENST00000477508 ZC3H15Q8WU90 426 aaKnown RBP16.09■□□□□ 0.17
TOP3A-205ENST00000477508 DBNDD2Q9BQY9 259 aa16.09■□□□□ 0.17
TOP3A-205ENST00000477508 IL1RAPL2Q9NP60 686 aa16.09■□□□□ 0.17
TOP3A-205ENST00000477508 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
TOP3A-205ENST00000477508 DBNLQ9UJU6 430 aaKnown RBP16.09■□□□□ 0.17
TOP3A-205ENST00000477508 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.16
TOP3A-205ENST00000477508 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-205ENST00000477508 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-205ENST00000477508 KIAA0825Q8IV33 1275 aa16.08■□□□□ 0.16
TOP3A-205ENST00000477508 CERS5Q8N5B7 392 aa16.08■□□□□ 0.16
TOP3A-205ENST00000477508 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.16
TOP3A-205ENST00000477508 MXD3Q9BW11 206 aa16.08■□□□□ 0.16
TOP3A-205ENST00000477508 CCDC8Q9H0W5 538 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-205ENST00000477508 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.16
TOP3A-205ENST00000477508 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-205ENST00000477508 FSTL1Q12841 308 aa16.07■□□□□ 0.16
TOP3A-205ENST00000477508 RASGRF1Q13972 1273 aa16.07■□□□□ 0.16
TOP3A-205ENST00000477508 SPTY2D1Q68D10 685 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-205ENST00000477508 MYOZ2Q9NPC6 264 aa16.07■□□□□ 0.16
TOP3A-205ENST00000477508 JAG2Q9Y219 1238 aa16.07■□□□□ 0.16
TOP3A-205ENST00000477508 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
TOP3A-205ENST00000477508 MAST3O60307 1309 aa16.07■□□□□ 0.16
TOP3A-205ENST00000477508 IGSF3O75054 1194 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 NEFLP07196 543 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 C1QTNF8P60827 252 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 HDLBPQ00341 1268 aaKnown RBP16.06■□□□□ 0.16
TOP3A-205ENST00000477508 KIF4BQ2VIQ3 1234 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 SPATA5Q8NB90 893 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 MRIQ9BWK5 157 aa16.06■□□□□ 0.16
TOP3A-205ENST00000477508 TBC1D10BQ4KMP7 808 aaPredicted RBP16.05■□□□□ 0.16
TOP3A-205ENST00000477508 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
TOP3A-205ENST00000477508 HMG20BQ9P0W2 317 aa16.05■□□□□ 0.16
TOP3A-205ENST00000477508 PGAP2Q9UHJ9 254 aa16.05■□□□□ 0.16
TOP3A-205ENST00000477508 SERPINA10Q9UK55 444 aa16.05■□□□□ 0.16
TOP3A-205ENST00000477508 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
TOP3A-205ENST00000477508 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
TOP3A-205ENST00000477508 LDHBP07195 334 aaKnown RBP16.04■□□□□ 0.16
TOP3A-205ENST00000477508 MCAMP43121 646 aa16.04■□□□□ 0.16
TOP3A-205ENST00000477508 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
TOP3A-205ENST00000477508 RBM26Q5T8P6 1007 aaKnown RBP16.04■□□□□ 0.16
TOP3A-205ENST00000477508 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
TOP3A-205ENST00000477508 TRPM4Q8TD43 1214 aa16.04■□□□□ 0.16
TOP3A-205ENST00000477508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.04■□□□□ 0.16
TOP3A-205ENST00000477508 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
TOP3A-205ENST00000477508 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
TOP3A-205ENST00000477508 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms