RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 FAM84BQ96KN1 310 aaPredicted RBP26.76■■□□□ 1.87
LIMK1-204ENST00000476792 BCAR3O75815 825 aa26.75■■□□□ 1.87
LIMK1-204ENST00000476792 TNS4Q8IZW8 715 aa26.75■■□□□ 1.87
LIMK1-204ENST00000476792 BEGAINQ9BUH8 593 aa26.75■■□□□ 1.87
LIMK1-204ENST00000476792 MAP2K2P36507 400 aa26.74■■□□□ 1.87
LIMK1-204ENST00000476792 RFX5P48382 616 aaPredicted RBP26.74■■□□□ 1.87
LIMK1-204ENST00000476792 MMP14P50281 582 aa26.74■■□□□ 1.87
LIMK1-204ENST00000476792 LBX1P52954 281 aa26.74■■□□□ 1.87
LIMK1-204ENST00000476792 DLGAP5Q15398 846 aa26.74■■□□□ 1.87
LIMK1-204ENST00000476792 VPS37DQ86XT2 251 aa26.74■■□□□ 1.87
LIMK1-204ENST00000476792 TDRD7Q8NHU6 1098 aaKnown RBP26.74■■□□□ 1.87
LIMK1-204ENST00000476792 MEIS3Q99687 375 aa26.74■■□□□ 1.87
LIMK1-204ENST00000476792 IQSEC3Q9UPP2 1182 aaPredicted RBP26.74■■□□□ 1.87
LIMK1-204ENST00000476792 LRRFIP2Q9Y608 721 aaKnown RBP26.74■■□□□ 1.87
LIMK1-204ENST00000476792 PDE8BO95263 885 aa26.73■■□□□ 1.87
LIMK1-204ENST00000476792 RGMBQ6NW40 437 aa26.73■■□□□ 1.87
LIMK1-204ENST00000476792 ARHGAP45Q92619 1136 aa26.73■■□□□ 1.87
LIMK1-204ENST00000476792 PCDHAC2Q9Y5I4 1007 aa26.73■■□□□ 1.87
LIMK1-204ENST00000476792 EYA2O00167 538 aa26.72■■□□□ 1.87
LIMK1-204ENST00000476792 VGLL2Q8N8G2 317 aa26.72■■□□□ 1.87
LIMK1-204ENST00000476792 SIL1Q9H173 461 aa26.72■■□□□ 1.87
LIMK1-204ENST00000476792 TNNQ9UQP3 1299 aa26.72■■□□□ 1.87
LIMK1-204ENST00000476792 IPO8O15397 1037 aaKnown RBP26.71■■□□□ 1.87
LIMK1-204ENST00000476792 ZNF157P51786 506 aaPredicted RBP26.71■■□□□ 1.87
LIMK1-204ENST00000476792 FKBP1AP62942 108 aaKnown RBP26.71■■□□□ 1.87
LIMK1-204ENST00000476792 PTPN12Q05209 780 aaKnown RBP26.71■■□□□ 1.87
LIMK1-204ENST00000476792 CAVIN4Q5BKX8 364 aa26.71■■□□□ 1.87
LIMK1-204ENST00000476792 MFSD14BQ5SR56 506 aa26.71■■□□□ 1.87
LIMK1-204ENST00000476792 ZBED3Q96IU2 234 aaPredicted RBP26.71■■□□□ 1.87
LIMK1-204ENST00000476792 ZIC5Q96T25 663 aa26.71■■□□□ 1.87
LIMK1-204ENST00000476792 FAM205AQ6ZU69 1335 aa26.7■■□□□ 1.87
LIMK1-204ENST00000476792 FRAT2O75474 233 aaPredicted RBP26.7■■□□□ 1.86
LIMK1-204ENST00000476792 HSPA8P11142 646 aaKnown RBP26.7■■□□□ 1.86
LIMK1-204ENST00000476792 RBM5P52756 815 aaKnown RBP eCLIP26.7■■□□□ 1.86
LIMK1-204ENST00000476792 CHAF1AQ13111 956 aaPredicted RBP26.7■■□□□ 1.86
LIMK1-204ENST00000476792 TTLL12Q14166 644 aaPredicted RBP26.7■■□□□ 1.86
LIMK1-204ENST00000476792 CFAP100Q494V2 611 aa26.7■■□□□ 1.86
LIMK1-204ENST00000476792 INTS3Q68E01 1043 aaKnown RBP26.7■■□□□ 1.86
LIMK1-204ENST00000476792 MOB2Q70IA6 237 aa26.7■■□□□ 1.86
LIMK1-204ENST00000476792 FBXO33Q7Z6M2 555 aa26.7■■□□□ 1.86
LIMK1-204ENST00000476792 CLUAP1Q96AJ1 413 aa26.7■■□□□ 1.86
LIMK1-204ENST00000476792 HDAC5Q9UQL6 1122 aa26.7■■□□□ 1.86
LIMK1-204ENST00000476792 THSD7BQ9C0I4 1608 aa26.69■■□□□ 1.86
LIMK1-204ENST00000476792 TRIM27P14373 513 aa26.69■■□□□ 1.86
LIMK1-204ENST00000476792 APOBEC3FQ8IUX4 373 aaKnown RBP26.69■■□□□ 1.86
LIMK1-204ENST00000476792 TSKSQ9UJT2 592 aa26.69■■□□□ 1.86
LIMK1-204ENST00000476792 BCAMP50895 628 aa26.68■■□□□ 1.86
LIMK1-204ENST00000476792 NOGQ13253 232 aa26.68■■□□□ 1.86
LIMK1-204ENST00000476792 PUM3Q15397 648 aaKnown RBP26.68■■□□□ 1.86
LIMK1-204ENST00000476792 PRDM10Q9NQV6 1147 aa26.68■■□□□ 1.86
LIMK1-204ENST00000476792 CLRN2A0PK11 232 aa26.67■■□□□ 1.86
LIMK1-204ENST00000476792 IFIT1P09914 478 aaKnown RBP26.67■■□□□ 1.86
LIMK1-204ENST00000476792 ATF7IPQ6VMQ6 1270 aa26.67■■□□□ 1.86
LIMK1-204ENST00000476792 ATG9AQ7Z3C6 839 aa26.67■■□□□ 1.86
LIMK1-204ENST00000476792 CCDC102AQ96A19 550 aa26.67■■□□□ 1.86
LIMK1-204ENST00000476792 TTF2Q9UNY4 1162 aaKnown RBP26.67■■□□□ 1.86
LIMK1-204ENST00000476792 FAM155AB1AL88 458 aaPredicted RBP26.66■■□□□ 1.86
LIMK1-204ENST00000476792 UBE2Q2LH0YL09 131 aa26.66■■□□□ 1.86
LIMK1-204ENST00000476792 NF2P35240 595 aa26.66■■□□□ 1.86
LIMK1-204ENST00000476792 MTMR14Q8NCE2 650 aa26.66■■□□□ 1.86
LIMK1-204ENST00000476792 PRMT6Q96LA8 375 aaPredicted RBP26.66■■□□□ 1.86
LIMK1-204ENST00000476792 PA2G4Q9UQ80 394 aaKnown RBP26.66■■□□□ 1.86
LIMK1-204ENST00000476792 SPDYE2BA6NHP3 402 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 MYO1BO43795 1136 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 GNAI3P08754 354 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 SPDYE6P0CI01 402 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 SLC5A1P13866 664 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 FGFR2P21802 821 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 FKBP1BP68106 108 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 PRKG1Q13976 671 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 VEZTQ9HBM0 779 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 AOX1Q06278 1338 aa26.65■■□□□ 1.86
LIMK1-204ENST00000476792 CAPN15O75808 1086 aa26.64■■□□□ 1.86
LIMK1-204ENST00000476792 KIF23Q02241 960 aaPredicted RBP26.63■■□□□ 1.85
LIMK1-204ENST00000476792 GRIK5Q16478 980 aa26.63■■□□□ 1.85
LIMK1-204ENST00000476792 DEFB129Q9H1M3 183 aa26.63■■□□□ 1.85
LIMK1-204ENST00000476792 CEP126Q9P2H0 1117 aa26.63■■□□□ 1.85
LIMK1-204ENST00000476792 PAPPA2Q9BXP8 1791 aa26.63■■□□□ 1.85
LIMK1-204ENST00000476792 CIAO1O76071 339 aa26.62■■□□□ 1.85
LIMK1-204ENST00000476792 SLC10A3P09131 477 aa26.62■■□□□ 1.85
LIMK1-204ENST00000476792 ZKSCAN2Q63HK3 967 aa26.62■■□□□ 1.85
LIMK1-204ENST00000476792 LPIN2Q92539 896 aa26.62■■□□□ 1.85
LIMK1-204ENST00000476792 ATP2B3Q16720 1220 aa26.61■■□□□ 1.85
LIMK1-204ENST00000476792 FBXO3Q9UK99 471 aa26.61■■□□□ 1.85
LIMK1-204ENST00000476792 SRGAP3O43295 1099 aa26.6■■□□□ 1.85
LIMK1-204ENST00000476792 RASAL3Q86YV0 1011 aa26.6■■□□□ 1.85
LIMK1-204ENST00000476792 TMEM57Q8N5G2 664 aa26.6■■□□□ 1.85
LIMK1-204ENST00000476792 SERPINA10Q9UK55 444 aa26.6■■□□□ 1.85
LIMK1-204ENST00000476792 FZD1Q9UP38 647 aa26.6■■□□□ 1.85
LIMK1-204ENST00000476792 IL15P40933 162 aaPredicted RBP26.59■■□□□ 1.85
LIMK1-204ENST00000476792 CRKP46108 304 aa26.59■■□□□ 1.85
LIMK1-204ENST00000476792 TBC1D22AQ8WUA7 517 aa26.59■■□□□ 1.85
LIMK1-204ENST00000476792 TDRD3Q9H7E2 651 aaKnown RBP26.59■■□□□ 1.85
LIMK1-204ENST00000476792 COPRSQ9NQ92 184 aa26.59■■□□□ 1.85
LIMK1-204ENST00000476792 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.59■■□□□ 1.85
LIMK1-204ENST00000476792 ZBED9Q6R2W3 1325 aa26.59■■□□□ 1.85
LIMK1-204ENST00000476792 ARMC9Q7Z3E5 817 aa26.58■■□□□ 1.85
LIMK1-204ENST00000476792 ANGEL1Q9UNK9 670 aaKnown RBP26.58■■□□□ 1.85
LIMK1-204ENST00000476792 CA12O43570 354 aa26.57■■□□□ 1.84
LIMK1-204ENST00000476792 GNAI2P04899 355 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms