RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 THSD7BQ9C0I4 1608 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 WNT10BO00744 389 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 CELF2O95319 508 aaKnown RBP17.1■□□□□ 0.33
MSL3-213ENST00000476743 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
MSL3-213ENST00000476743 DEFB115Q30KQ5 88 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
MSL3-213ENST00000476743 KIAA0825Q8IV33 1275 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 LPIN2Q92539 896 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
MSL3-213ENST00000476743 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
MSL3-213ENST00000476743 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 ZBTB22O15209 634 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
MSL3-213ENST00000476743 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 SULF1Q8IWU6 871 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
MSL3-213ENST00000476743 HHIPL1Q96JK4 782 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 SIL1Q9H173 461 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 MYH13Q9UKX3 1938 aa17.09■□□□□ 0.33
MSL3-213ENST00000476743 ZBTB7BO15156 539 aaPredicted RBP17.08■□□□□ 0.32
MSL3-213ENST00000476743 SLC5A1P13866 664 aa17.08■□□□□ 0.32
MSL3-213ENST00000476743 VEGFBP49765 207 aa17.08■□□□□ 0.32
MSL3-213ENST00000476743 DLK2Q6UY11 383 aa17.08■□□□□ 0.32
MSL3-213ENST00000476743 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
MSL3-213ENST00000476743 CEP126Q9P2H0 1117 aa17.08■□□□□ 0.32
MSL3-213ENST00000476743 ABT1Q9ULW3 272 aaKnown RBP17.08■□□□□ 0.32
MSL3-213ENST00000476743 BCAMP50895 628 aa17.07■□□□□ 0.32
MSL3-213ENST00000476743 VPS37DQ86XT2 251 aa17.07■□□□□ 0.32
MSL3-213ENST00000476743 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
MSL3-213ENST00000476743 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
MSL3-213ENST00000476743 ATP2B3Q16720 1220 aa17.06■□□□□ 0.32
MSL3-213ENST00000476743 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
MSL3-213ENST00000476743 POLA2Q14181 598 aa17.05■□□□□ 0.32
MSL3-213ENST00000476743 DLGAP5Q15398 846 aa17.05■□□□□ 0.32
MSL3-213ENST00000476743 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
MSL3-213ENST00000476743 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
MSL3-213ENST00000476743 CDCA5Q96FF9 252 aa17.05■□□□□ 0.32
MSL3-213ENST00000476743 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
MSL3-213ENST00000476743 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
MSL3-213ENST00000476743 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
MSL3-213ENST00000476743 WDR33Q9C0J8 1336 aaKnown RBP17.04■□□□□ 0.32
MSL3-213ENST00000476743 MS4A1P11836 297 aa17.04■□□□□ 0.32
MSL3-213ENST00000476743 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
MSL3-213ENST00000476743 GBA2Q9HCG7 927 aaPredicted RBP17.04■□□□□ 0.32
MSL3-213ENST00000476743 SERPINA10Q9UK55 444 aa17.04■□□□□ 0.32
MSL3-213ENST00000476743 IQSEC3Q9UPP2 1182 aaPredicted RBP17.04■□□□□ 0.32
MSL3-213ENST00000476743 PAPPA2Q9BXP8 1791 aa17.04■□□□□ 0.32
MSL3-213ENST00000476743 SPDYE2BA6NHP3 402 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 F8W031 263 aaPredicted RBP17.03■□□□□ 0.32
MSL3-213ENST00000476743 SPDYE6P0CI01 402 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 ECE1P42892 770 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
MSL3-213ENST00000476743 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 CAPNS2Q96L46 248 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 PCDHAC2Q9Y5I4 1007 aa17.03■□□□□ 0.32
MSL3-213ENST00000476743 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
MSL3-213ENST00000476743 CYP4F22Q6NT55 531 aa17.02■□□□□ 0.32
MSL3-213ENST00000476743 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
MSL3-213ENST00000476743 PRMT6Q96LA8 375 aaPredicted RBP17.02■□□□□ 0.32
MSL3-213ENST00000476743 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.32
MSL3-213ENST00000476743 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
MSL3-213ENST00000476743 SEMA3EO15041 775 aa17.01■□□□□ 0.31
MSL3-213ENST00000476743 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
MSL3-213ENST00000476743 HSPA1AP0DMV8 641 aaKnown RBP17.01■□□□□ 0.31
MSL3-213ENST00000476743 HSPA1BP0DMV9 641 aaKnown RBP17.01■□□□□ 0.31
MSL3-213ENST00000476743 FKBP1BP68106 108 aa17.01■□□□□ 0.31
MSL3-213ENST00000476743 TFCP2Q12800 502 aa17.01■□□□□ 0.31
MSL3-213ENST00000476743 CHAF1AQ13111 956 aaPredicted RBP17.01■□□□□ 0.31
MSL3-213ENST00000476743 GRIK5Q16478 980 aa17.01■□□□□ 0.31
MSL3-213ENST00000476743 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
MSL3-213ENST00000476743 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
MSL3-213ENST00000476743 AOX1Q06278 1338 aa17■□□□□ 0.31
MSL3-213ENST00000476743 SALL1Q9NSC2 1324 aa17■□□□□ 0.31
MSL3-213ENST00000476743 A0A1B0GUL7 405 aa17■□□□□ 0.31
MSL3-213ENST00000476743 ADORA1P30542 326 aa17■□□□□ 0.31
MSL3-213ENST00000476743 HUNKP57058 714 aa17■□□□□ 0.31
MSL3-213ENST00000476743 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
MSL3-213ENST00000476743 WDR66Q8TBY9 1149 aa17■□□□□ 0.31
MSL3-213ENST00000476743 C1orf115Q9H7X2 142 aa17■□□□□ 0.31
MSL3-213ENST00000476743 GNL3LQ9NVN8 582 aaKnown RBP17■□□□□ 0.31
MSL3-213ENST00000476743 SCAF8Q9UPN6 1271 aaKnown RBP17■□□□□ 0.31
MSL3-213ENST00000476743 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
MSL3-213ENST00000476743 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
MSL3-213ENST00000476743 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
MSL3-213ENST00000476743 MYO1BO43795 1136 aa16.99■□□□□ 0.31
MSL3-213ENST00000476743 MAP2K2P36507 400 aa16.99■□□□□ 0.31
MSL3-213ENST00000476743 PHKA1P46020 1223 aa16.99■□□□□ 0.31
MSL3-213ENST00000476743 CRKP46108 304 aa16.99■□□□□ 0.31
MSL3-213ENST00000476743 TIMM10P62072 90 aa16.99■□□□□ 0.31
MSL3-213ENST00000476743 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
MSL3-213ENST00000476743 CCDC102BQ68D86 513 aa16.99■□□□□ 0.31
MSL3-213ENST00000476743 WBP1LQ9NX94 342 aa16.99■□□□□ 0.31
MSL3-213ENST00000476743 MAST3O60307 1309 aa16.98■□□□□ 0.31
MSL3-213ENST00000476743 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms