RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 RHPN1Q8TCX5 695 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 NEUROD6Q96NK8 337 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 ZBTB47Q9UFB7 747 aaPredicted RBP16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 CNTNAP1P78357 1384 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 ZNF609O15014 1411 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 SEMA3EO15041 775 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 ZBTB22O15209 634 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 ITGBL1O95965 494 aaPredicted RBP16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 VIL1P09327 827 aaKnown RBP16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 TIMM10P62072 90 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 HDAC1Q13547 482 aaPredicted RBP16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 TNNI3KQ59H18 835 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 MAP1SQ66K74 1059 aaPredicted RBP16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 TTLL5Q6EMB2 1281 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 AGBL3Q8NEM8 1001 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 DCTPP1Q9H773 170 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 FPGT-TNNI3KV9GXZ4 949 aa16.23■□□□□ 0.19
HLA-DPA1-246ENST00000476642 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 PSMD14O00487 310 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 FKBP1AP62942 108 aaKnown RBP16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 CCDC158Q5M9N0 1113 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 TBC1D22AQ8WUA7 517 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 DPF2Q92785 391 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 GCC1Q96CN9 775 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 XAGE2Q96GT9 111 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
HLA-DPA1-246ENST00000476642 BCAMP50895 628 aa16.21■□□□□ 0.19
HLA-DPA1-246ENST00000476642 GTF2IP78347 998 aa16.21■□□□□ 0.19
HLA-DPA1-246ENST00000476642 RSBN1LQ6PCB5 846 aaPredicted RBP16.21■□□□□ 0.19
HLA-DPA1-246ENST00000476642 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
HLA-DPA1-246ENST00000476642 ABT1Q9ULW3 272 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-246ENST00000476642 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 H7C1D1 291 aa16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 VEGFBP49765 207 aa16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
HLA-DPA1-246ENST00000476642 APBB1O00213 710 aa16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 IFIT2P09913 472 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 EPS15P42566 896 aa16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 GMPSP49915 693 aaPredicted RBP16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 DACT2Q5SW24 774 aa16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 OGFOD1Q8N543 542 aa16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 WDR66Q8TBY9 1149 aa16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 GPRC5DQ9NZD1 345 aa16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 HDAC9Q9UKV0 1011 aa16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 PDS5AQ29RF7 1337 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-246ENST00000476642 CTCFP49711 727 aaPredicted RBP16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 AACSQ86V21 672 aa16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 EAF2Q96CJ1 260 aaPredicted RBP16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 KCNQ5Q9NR82 932 aa16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 SUGT1Q9Y2Z0 365 aa16.18■□□□□ 0.18
HLA-DPA1-246ENST00000476642 ZNF646O15015 1829 aaPredicted RBP16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 FOXN1O15353 648 aa16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 ADORA1P30542 326 aa16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 PHKA1P46020 1223 aa16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 SCNN1DP51172 638 aa16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 ZNF512BQ96KM6 892 aaPredicted RBP16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 IL1RAPL2Q9NP60 686 aa16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 ADARB2Q9NS39 739 aaKnown RBP16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 CNOT7Q9UIV1 285 aaKnown RBP16.17■□□□□ 0.18
HLA-DPA1-246ENST00000476642 RASSF10A6NK89 507 aa16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 USP17L8P0C7I0 530 aa16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 MFSD14BQ5SR56 506 aa16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 DBNDD2Q9BQY9 259 aa16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 MAST3O60307 1309 aa16.16■□□□□ 0.18
HLA-DPA1-246ENST00000476642 IGSF3O75054 1194 aa16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 GMLQ99445 158 aa16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 CCDC8Q9H0W5 538 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 DBNLQ9UJU6 430 aaKnown RBP16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 IQSEC3Q9UPP2 1182 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 WDR33Q9C0J8 1336 aaKnown RBP16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 SALL1Q9NSC2 1324 aa16.15■□□□□ 0.18
HLA-DPA1-246ENST00000476642 MAP2K1Q02750 393 aaPredicted RBP16.14■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ERICH6BQ5W0A0 696 aa16.14■□□□□ 0.17
HLA-DPA1-246ENST00000476642 SPTY2D1Q68D10 685 aaPredicted RBP16.14■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ADAMTSL1Q8N6G6 1762 aa16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ECE1P42892 770 aa16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 ZNF280AP59817 542 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 GRM1Q13255 1194 aa16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 RASGRF1Q13972 1273 aa16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 SMC5Q8IY18 1101 aa16.13■□□□□ 0.17
HLA-DPA1-246ENST00000476642 SPATA5Q8NB90 893 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms