RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 VEGFBP49765 207 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.37
CCM2-208ENST00000476594 DLGAP5Q15398 846 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 LRRC24Q50LG9 513 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
CCM2-208ENST00000476594 TBC1D22AQ8WUA7 517 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.37
CCM2-208ENST00000476594 FAM205AQ6ZU69 1335 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 GNAI2P04899 355 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 IL15P40933 162 aaPredicted RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 FKBP1BP68106 108 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 CST9Q5W186 159 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 SAPCD2Q86UD0 394 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 TDRD7Q8NHU6 1098 aaKnown RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 LPIN2Q92539 896 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 CAPNS2Q96L46 248 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 MEIS3Q99687 375 aa12.7□□□□□ -0.38
CCM2-208ENST00000476594 GBA2Q9HCG7 927 aaPredicted RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 GNL3LQ9NVN8 582 aaKnown RBP12.7□□□□□ -0.38
CCM2-208ENST00000476594 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 WNT10BO00744 389 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 GYG1P46976 350 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
CCM2-208ENST00000476594 HUNKP57058 714 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 GRM1Q13255 1194 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 FAM84BQ96KN1 310 aaPredicted RBP12.69□□□□□ -0.38
CCM2-208ENST00000476594 MXD3Q9BW11 206 aa12.69□□□□□ -0.38
CCM2-208ENST00000476594 COL1A1P02452 1464 aaPredicted RBP12.69□□□□□ -0.38
CCM2-208ENST00000476594 MAST3O60307 1309 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 SRGAP3O43295 1099 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 MAP2K2P36507 400 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 RBM5P52756 815 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCM2-208ENST00000476594 FMR1Q06787 632 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCM2-208ENST00000476594 MTX1Q13505 466 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
CCM2-208ENST00000476594 VGLL2Q8N8G2 317 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 SIL1Q9H173 461 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 COPRSQ9NQ92 184 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 AKAP2Q9Y2D5 859 aa12.68□□□□□ -0.38
CCM2-208ENST00000476594 F8W031 263 aaPredicted RBP12.67□□□□□ -0.38
CCM2-208ENST00000476594 NOGQ13253 232 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 TNFAIP1Q13829 316 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 NBPF9Q3BBW0 867 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 SERPINA10Q9UK55 444 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 SUGT1Q9Y2Z0 365 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 PPP2R3BQ9Y5P8 575 aa12.67□□□□□ -0.38
CCM2-208ENST00000476594 CA12O43570 354 aa12.66□□□□□ -0.38
CCM2-208ENST00000476594 FGFR2P21802 821 aa12.66□□□□□ -0.38
CCM2-208ENST00000476594 CTCFP49711 727 aaPredicted RBP12.66□□□□□ -0.38
CCM2-208ENST00000476594 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
CCM2-208ENST00000476594 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
CCM2-208ENST00000476594 CFAP100Q494V2 611 aa12.66□□□□□ -0.38
CCM2-208ENST00000476594 ITPRIPQ8IWB1 547 aa12.66□□□□□ -0.38
CCM2-208ENST00000476594 CERS5Q8N5B7 392 aa12.66□□□□□ -0.38
CCM2-208ENST00000476594 WDR66Q8TBY9 1149 aa12.66□□□□□ -0.38
CCM2-208ENST00000476594 CHMP4BQ9H444 224 aaKnown RBP12.66□□□□□ -0.38
CCM2-208ENST00000476594 TTF2Q9UNY4 1162 aaKnown RBP12.66□□□□□ -0.38
CCM2-208ENST00000476594 PCNTO95613 3336 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.38
CCM2-208ENST00000476594 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 SEMA3EO15041 775 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 ZNF157P51786 506 aaPredicted RBP12.65□□□□□ -0.38
CCM2-208ENST00000476594 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
CCM2-208ENST00000476594 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCM2-208ENST00000476594 RGMBQ6NW40 437 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 TMEM57Q8N5G2 664 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 JAG2Q9Y219 1238 aa12.65□□□□□ -0.38
CCM2-208ENST00000476594 POLR2AP24928 1970 aaKnown RBP12.65□□□□□ -0.38
CCM2-208ENST00000476594 ASTN2O75129 1339 aaPredicted RBP12.64□□□□□ -0.39
CCM2-208ENST00000476594 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
CCM2-208ENST00000476594 TNNI2P48788 182 aa12.64□□□□□ -0.39
CCM2-208ENST00000476594 BCAMP50895 628 aa12.64□□□□□ -0.39
CCM2-208ENST00000476594 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
CCM2-208ENST00000476594 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
CCM2-208ENST00000476594 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.64□□□□□ -0.39
CCM2-208ENST00000476594 TEKT1Q969V4 418 aa12.64□□□□□ -0.39
CCM2-208ENST00000476594 ZBED3Q96IU2 234 aaPredicted RBP12.64□□□□□ -0.39
CCM2-208ENST00000476594 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
CCM2-208ENST00000476594 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
CCM2-208ENST00000476594 DENND2AQ9ULE3 1009 aa12.64□□□□□ -0.39
CCM2-208ENST00000476594 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
CCM2-208ENST00000476594 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms