RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 GBA2Q9HCG7 927 aaPredicted RBP22.37■■□□□ 1.17
RAPGEF3-208ENST00000476259 JAG2Q9Y219 1238 aa22.37■■□□□ 1.17
RAPGEF3-208ENST00000476259 LRRFIP2Q9Y608 721 aaKnown RBP22.37■■□□□ 1.17
RAPGEF3-208ENST00000476259 TRIM27P14373 513 aa22.36■■□□□ 1.17
RAPGEF3-208ENST00000476259 HUNKP57058 714 aa22.36■■□□□ 1.17
RAPGEF3-208ENST00000476259 FKBP1AP62942 108 aaKnown RBP22.36■■□□□ 1.17
RAPGEF3-208ENST00000476259 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
RAPGEF3-208ENST00000476259 C2orf69Q8N8R5 385 aa22.36■■□□□ 1.17
RAPGEF3-208ENST00000476259 TDRD7Q8NHU6 1098 aaKnown RBP22.36■■□□□ 1.17
RAPGEF3-208ENST00000476259 SCAF8Q9UPN6 1271 aaKnown RBP22.36■■□□□ 1.17
RAPGEF3-208ENST00000476259 ZBED9Q6R2W3 1325 aa22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 F8W031 263 aaPredicted RBP22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 EYA2O00167 538 aa22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 AIDAQ96BJ3 306 aa22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 WBP1LQ9NX94 342 aa22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 TNNQ9UQP3 1299 aa22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 PAPPA2Q9BXP8 1791 aa22.35■■□□□ 1.17
RAPGEF3-208ENST00000476259 FAM205AQ6ZU69 1335 aa22.34■■□□□ 1.17
RAPGEF3-208ENST00000476259 FOXN1O15353 648 aa22.34■■□□□ 1.17
RAPGEF3-208ENST00000476259 MAP2K1Q02750 393 aaPredicted RBP22.34■■□□□ 1.17
RAPGEF3-208ENST00000476259 COL13A1Q5TAT6 717 aaPredicted RBP22.34■■□□□ 1.17
RAPGEF3-208ENST00000476259 VPS37DQ86XT2 251 aa22.34■■□□□ 1.17
RAPGEF3-208ENST00000476259 AOC2O75106 756 aa22.33■■□□□ 1.17
RAPGEF3-208ENST00000476259 GNAI3P08754 354 aa22.33■■□□□ 1.17
RAPGEF3-208ENST00000476259 DLGAP5Q15398 846 aa22.33■■□□□ 1.17
RAPGEF3-208ENST00000476259 CAVIN4Q5BKX8 364 aa22.33■■□□□ 1.17
RAPGEF3-208ENST00000476259 CLUAP1Q96AJ1 413 aa22.33■■□□□ 1.17
RAPGEF3-208ENST00000476259 ZBED3Q96IU2 234 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF3-208ENST00000476259 SIL1Q9H173 461 aa22.33■■□□□ 1.17
RAPGEF3-208ENST00000476259 PUM3Q15397 648 aaKnown RBP22.32■■□□□ 1.16
RAPGEF3-208ENST00000476259 FBXO33Q7Z6M2 555 aa22.32■■□□□ 1.16
RAPGEF3-208ENST00000476259 IFIT1P09914 478 aaKnown RBP22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 FGFR2P21802 821 aa22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 MAP2K2P36507 400 aa22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 MFSD14BQ5SR56 506 aa22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 ZKSCAN2Q63HK3 967 aa22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 ATG9AQ7Z3C6 839 aa22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 FBXO3Q9UK99 471 aa22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 IQSEC3Q9UPP2 1182 aaPredicted RBP22.31■■□□□ 1.16
RAPGEF3-208ENST00000476259 CFAP100Q494V2 611 aa22.3■■□□□ 1.16
RAPGEF3-208ENST00000476259 RGMBQ6NW40 437 aa22.3■■□□□ 1.16
RAPGEF3-208ENST00000476259 APOBEC3FQ8IUX4 373 aaKnown RBP22.3■■□□□ 1.16
RAPGEF3-208ENST00000476259 MTMR14Q8NCE2 650 aa22.3■■□□□ 1.16
RAPGEF3-208ENST00000476259 PCDHAC2Q9Y5I4 1007 aa22.3■■□□□ 1.16
RAPGEF3-208ENST00000476259 FRAT2O75474 233 aaPredicted RBP22.29■■□□□ 1.16
RAPGEF3-208ENST00000476259 CIAO1O76071 339 aa22.29■■□□□ 1.16
RAPGEF3-208ENST00000476259 CTCFP49711 727 aaPredicted RBP22.29■■□□□ 1.16
RAPGEF3-208ENST00000476259 BCAMP50895 628 aa22.29■■□□□ 1.16
RAPGEF3-208ENST00000476259 PRAMEF18Q5VWM3 479 aa22.29■■□□□ 1.16
RAPGEF3-208ENST00000476259 PA2G4Q9UQ80 394 aaKnown RBP22.29■■□□□ 1.16
RAPGEF3-208ENST00000476259 SLC5A1P13866 664 aa22.28■■□□□ 1.16
RAPGEF3-208ENST00000476259 RBM5P52756 815 aaKnown RBP eCLIP22.28■■□□□ 1.16
RAPGEF3-208ENST00000476259 CHAF1AQ13111 956 aaPredicted RBP22.28■■□□□ 1.16
RAPGEF3-208ENST00000476259 IFFO2Q5TF58 517 aa22.28■■□□□ 1.16
RAPGEF3-208ENST00000476259 LPIN2Q92539 896 aa22.28■■□□□ 1.16
RAPGEF3-208ENST00000476259 SPDYE2BA6NHP3 402 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 MYO1BO43795 1136 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 SPDYE6P0CI01 402 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 FKBP1BP68106 108 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 NOGQ13253 232 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 BEGAINQ9BUH8 593 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 COPRSQ9NQ92 184 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 CEP126Q9P2H0 1117 aa22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 TTF2Q9UNY4 1162 aaKnown RBP22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 COL1A1P02452 1464 aaPredicted RBP22.27■■□□□ 1.16
RAPGEF3-208ENST00000476259 AKAP11Q9UKA4 1901 aa22.26■■□□□ 1.15
RAPGEF3-208ENST00000476259 SRGAP3O43295 1099 aa22.26■■□□□ 1.15
RAPGEF3-208ENST00000476259 IL15P40933 162 aaPredicted RBP22.26■■□□□ 1.15
RAPGEF3-208ENST00000476259 ZNF157P51786 506 aaPredicted RBP22.26■■□□□ 1.15
RAPGEF3-208ENST00000476259 TMEM57Q8N5G2 664 aa22.26■■□□□ 1.15
RAPGEF3-208ENST00000476259 PRMT6Q96LA8 375 aaPredicted RBP22.26■■□□□ 1.15
RAPGEF3-208ENST00000476259 FAM155AB1AL88 458 aaPredicted RBP22.25■■□□□ 1.15
RAPGEF3-208ENST00000476259 GNAI2P04899 355 aa22.25■■□□□ 1.15
RAPGEF3-208ENST00000476259 NF2P35240 595 aa22.25■■□□□ 1.15
RAPGEF3-208ENST00000476259 MTX1Q13505 466 aa22.25■■□□□ 1.15
RAPGEF3-208ENST00000476259 ATP2B3Q16720 1220 aa22.25■■□□□ 1.15
RAPGEF3-208ENST00000476259 TBC1D22AQ8WUA7 517 aa22.25■■□□□ 1.15
RAPGEF3-208ENST00000476259 CLRN2A0PK11 232 aa22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 HSPA8P11142 646 aaKnown RBP22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 LBX1P52954 281 aa22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 MOB2Q70IA6 237 aa22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 CCDC102AQ96A19 550 aa22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 ZIC5Q96T25 663 aa22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 PRDM10Q9NQV6 1147 aa22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 SERPINA10Q9UK55 444 aa22.24■■□□□ 1.15
RAPGEF3-208ENST00000476259 TTLL12Q14166 644 aaPredicted RBP22.23■■□□□ 1.15
RAPGEF3-208ENST00000476259 GRIK5Q16478 980 aa22.23■■□□□ 1.15
RAPGEF3-208ENST00000476259 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
RAPGEF3-208ENST00000476259 TNS4Q8IZW8 715 aa22.23■■□□□ 1.15
RAPGEF3-208ENST00000476259 DEFB129Q9H1M3 183 aa22.23■■□□□ 1.15
RAPGEF3-208ENST00000476259 VEZTQ9HBM0 779 aa22.23■■□□□ 1.15
RAPGEF3-208ENST00000476259 AOX1Q06278 1338 aa22.23■■□□□ 1.15
RAPGEF3-208ENST00000476259 SLC10A3P09131 477 aa22.22■■□□□ 1.15
RAPGEF3-208ENST00000476259 UBE2Q2LH0YL09 131 aa22.21■■□□□ 1.15
RAPGEF3-208ENST00000476259 CRKP46108 304 aa22.21■■□□□ 1.15
RAPGEF3-208ENST00000476259 DZIP1LQ8IYY4 767 aaKnown RBP22.21■■□□□ 1.15
RAPGEF3-208ENST00000476259 PPP2R3BQ9Y5P8 575 aa22.21■■□□□ 1.15
RAPGEF3-208ENST00000476259 PRKG1Q13976 671 aa22.2■■□□□ 1.14
RAPGEF3-208ENST00000476259 TDRD3Q9H7E2 651 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms