RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 ZNF500O60304 480 aaPredicted RBP18.82■□□□□ 0.6
VARS2-207ENST00000476162 HS1BP3Q53T59 392 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 SLC9C2Q5TAH2 1124 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 NCOA5Q9HCD5 579 aaKnown RBP18.82■□□□□ 0.6
VARS2-207ENST00000476162 SPATA31A5Q5VU36 1347 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 SPATA31A7Q8IWB4 1347 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 PDIA3P30101 505 aaKnown RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 ADD2P35612 726 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 RESTQ13127 1097 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 AK7Q96M32 723 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 UTP14AQ9BVJ6 771 aaKnown RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 SCAND2PQ9GZW5 306 aaPredicted RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 PTPDC1A2A3K4 754 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 CAMTA2O94983 1202 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 TTF1Q15361 905 aaPredicted RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 PUM3Q15397 648 aaKnown RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 LPIN2Q92539 896 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 SPATA32Q96LK8 384 aa18.81■□□□□ 0.6
VARS2-207ENST00000476162 GPHNQ9NQX3 736 aaPredicted RBP18.81■□□□□ 0.6
VARS2-207ENST00000476162 MROH5Q6ZUA9 1318 aa18.8■□□□□ 0.6
VARS2-207ENST00000476162 AKAP11Q9UKA4 1901 aa18.8■□□□□ 0.6
VARS2-207ENST00000476162 IDH1O75874 414 aaKnown RBP18.8■□□□□ 0.6
VARS2-207ENST00000476162 FGFR2P21802 821 aa18.8■□□□□ 0.6
VARS2-207ENST00000476162 ZSCAN25Q6NSZ9 544 aa18.8■□□□□ 0.6
VARS2-207ENST00000476162 PRDM10Q9NQV6 1147 aa18.8■□□□□ 0.6
VARS2-207ENST00000476162 NRAPQ86VF7 1730 aa18.8■□□□□ 0.6
VARS2-207ENST00000476162 ARID4AP29374 1257 aaPredicted RBP18.8■□□□□ 0.6
VARS2-207ENST00000476162 LEO1Q8WVC0 666 aaPredicted RBP18.8■□□□□ 0.6
VARS2-207ENST00000476162 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
VARS2-207ENST00000476162 SNAP23O00161 211 aa18.79■□□□□ 0.6
VARS2-207ENST00000476162 PPFIA3O75145 1194 aa18.79■□□□□ 0.6
VARS2-207ENST00000476162 HMGN5P82970 282 aaKnown RBP18.79■□□□□ 0.6
VARS2-207ENST00000476162 FBXL16Q8N461 479 aa18.79■□□□□ 0.6
VARS2-207ENST00000476162 NWD2Q9ULI1 1742 aa18.79■□□□□ 0.6
VARS2-207ENST00000476162 ZNF213O14771 459 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 UQCRFS1P1P0C7P4 283 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 ZSCAN20P17040 1043 aaPredicted RBP18.78■□□□□ 0.6
VARS2-207ENST00000476162 LIG1P18858 919 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 FOSBP53539 338 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 MPHOSPH8Q99549 860 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 ZSCAN16Q9H4T2 348 aaPredicted RBP18.78■□□□□ 0.6
VARS2-207ENST00000476162 LTBP4Q8N2S1 1624 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 PHLPP1O60346 1717 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 KCNQ2O43526 872 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 PARP10Q53GL7 1025 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 FUCA2Q9BTY2 467 aa18.78■□□□□ 0.6
VARS2-207ENST00000476162 NOL7Q9UMY1 257 aaKnown RBP18.78■□□□□ 0.6
VARS2-207ENST00000476162 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
VARS2-207ENST00000476162 PRC1O43663 620 aa18.77■□□□□ 0.6
VARS2-207ENST00000476162 EVCP57679 992 aa18.77■□□□□ 0.6
VARS2-207ENST00000476162 UBE3CQ15386 1083 aa18.77■□□□□ 0.6
VARS2-207ENST00000476162 BARGINQ6ZT62 677 aa18.77■□□□□ 0.6
VARS2-207ENST00000476162 MB21D2Q8IYB1 491 aaPredicted RBP18.77■□□□□ 0.6
VARS2-207ENST00000476162 ZNF532Q9HCE3 1301 aa18.77■□□□□ 0.6
VARS2-207ENST00000476162 SALL1Q9NSC2 1324 aa18.77■□□□□ 0.6
VARS2-207ENST00000476162 GOLGA6L4A6NEF3 574 aa18.77■□□□□ 0.59
VARS2-207ENST00000476162 MCM5P33992 734 aa18.77■□□□□ 0.59
VARS2-207ENST00000476162 NCOA7Q8NI08 942 aa18.77■□□□□ 0.59
VARS2-207ENST00000476162 WWC3Q9ULE0 1092 aa18.77■□□□□ 0.59
VARS2-207ENST00000476162 SLC5A1P13866 664 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 PDE6AP16499 860 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 NAA16Q6N069 864 aaPredicted RBP18.76■□□□□ 0.59
VARS2-207ENST00000476162 BBXQ8WY36 941 aaPredicted RBP18.76■□□□□ 0.59
VARS2-207ENST00000476162 CCDC94Q9BW85 323 aaPredicted RBP18.76■□□□□ 0.59
VARS2-207ENST00000476162 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.76■□□□□ 0.59
VARS2-207ENST00000476162 KIF3AQ9Y496 699 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 MYH7P12883 1935 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 LRP5O75197 1615 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 NTSR2O95665 410 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 PIP4K2BP78356 416 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 UVSSAQ2YD98 709 aa18.76■□□□□ 0.59
VARS2-207ENST00000476162 RALYLQ86SE5 291 aaKnown RBP18.76■□□□□ 0.59
VARS2-207ENST00000476162 MYH14Q7Z406 1995 aaKnown RBP18.75■□□□□ 0.59
VARS2-207ENST00000476162 ANTXR2P58335 489 aa18.75■□□□□ 0.59
VARS2-207ENST00000476162 CCDC152Q4G0S7 254 aa18.75■□□□□ 0.59
VARS2-207ENST00000476162 SPATA5Q8NB90 893 aa18.75■□□□□ 0.59
VARS2-207ENST00000476162 PGBD1Q96JS3 809 aa18.75■□□□□ 0.59
VARS2-207ENST00000476162 ATRNO75882 1429 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 TCRBV5S4A2TA0A5A2 114 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 APPP05067 770 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 GTF2E1P29083 439 aaPredicted RBP18.74■□□□□ 0.59
VARS2-207ENST00000476162 RASGRF1Q13972 1273 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 KLHL34Q8N239 644 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 NBPF3Q9H094 633 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 DACT1Q9NYF0 836 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 CFAP45Q9UL16 551 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 CAMK4Q16566 473 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 NUP62CLQ9H1M0 184 aa18.74■□□□□ 0.59
VARS2-207ENST00000476162 KLF18A0A0U1RQI7 1052 aa18.73■□□□□ 0.59
VARS2-207ENST00000476162 FDPSP14324 419 aaKnown RBP18.73■□□□□ 0.59
VARS2-207ENST00000476162 ADD1P35611 737 aaKnown RBP18.73■□□□□ 0.59
VARS2-207ENST00000476162 GUCY1B3Q02153 619 aa18.73■□□□□ 0.59
VARS2-207ENST00000476162 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
VARS2-207ENST00000476162 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
VARS2-207ENST00000476162 ARID3AQ99856 593 aa18.73■□□□□ 0.59
VARS2-207ENST00000476162 DENND2AQ9ULE3 1009 aa18.73■□□□□ 0.59
VARS2-207ENST00000476162 MYO5AQ9Y4I1 1855 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms