RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 RNF186Q9NXI6 227 aa14.28□□□□□ -0.12
NUDCD3-206ENST00000475952 GGA3Q9NZ52 723 aa14.28□□□□□ -0.12
NUDCD3-206ENST00000475952 IRS2Q9Y4H2 1338 aa14.28□□□□□ -0.12
NUDCD3-206ENST00000475952 PAPPA2Q9BXP8 1791 aa14.27□□□□□ -0.12
NUDCD3-206ENST00000475952 TRPA1O75762 1119 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 MMP14P50281 582 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 TTLL5Q6EMB2 1281 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 KRT26Q7Z3Y9 468 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 SULF1Q8IWU6 871 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 ARHGAP45Q92619 1136 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 GMLQ99445 158 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.13
NUDCD3-206ENST00000475952 ZBED9Q6R2W3 1325 aa14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 SNAP23O00161 211 aa14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 GTF2IP78347 998 aa14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 CTU1Q7Z7A3 348 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 GBA2Q9HCG7 927 aaPredicted RBP14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
NUDCD3-206ENST00000475952 PITPNM2Q9BZ72 1349 aa14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 ADM5C9JUS6 153 aa14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 SLC10A3P09131 477 aa14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 IL1R1P14778 569 aa14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 METTL24Q5JXM2 366 aa14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 ANGEL2Q5VTE6 544 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 MXD3Q9BW11 206 aa14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 PUS3Q9BZE2 481 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-206ENST00000475952 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
NUDCD3-206ENST00000475952 SCARF1Q14162 830 aa14.24□□□□□ -0.13
NUDCD3-206ENST00000475952 KIAA0825Q8IV33 1275 aa14.24□□□□□ -0.13
NUDCD3-206ENST00000475952 C2orf69Q8N8R5 385 aa14.24□□□□□ -0.13
NUDCD3-206ENST00000475952 HPS5Q9UPZ3 1129 aa14.24□□□□□ -0.13
NUDCD3-206ENST00000475952 RIPOR2Q9Y4F9 1068 aa14.24□□□□□ -0.13
NUDCD3-206ENST00000475952 AK9Q5TCS8 1911 aa14.23□□□□□ -0.13
NUDCD3-206ENST00000475952 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
NUDCD3-206ENST00000475952 KLHDC4Q8TBB5 520 aa14.23□□□□□ -0.13
NUDCD3-206ENST00000475952 FRAT1Q92837 279 aaPredicted RBP14.23□□□□□ -0.13
NUDCD3-206ENST00000475952 CSRNP1Q96S65 589 aa14.23□□□□□ -0.13
NUDCD3-206ENST00000475952 ASTN2O75129 1339 aaPredicted RBP14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 MYH2Q9UKX2 1941 aa14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 PDE8BO95263 885 aa14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 TRIM27P14373 513 aa14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 HIBADHP31937 336 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 FKBP1AP62942 108 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 INTS3Q68E01 1043 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 ATF7IPQ6VMQ6 1270 aa14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 VPS37DQ86XT2 251 aa14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 LRRFIP2Q9Y608 721 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 COL1A1P02452 1464 aaPredicted RBP14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 LAMB1P07942 1786 aa14.22□□□□□ -0.13
NUDCD3-206ENST00000475952 EYA2O00167 538 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 WNT10BO00744 389 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 BCAR3O75815 825 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 SASH1O94885 1247 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 GNAI3P08754 354 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 GYG1P46976 350 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 RFX5P48382 616 aaPredicted RBP14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 PUM3Q15397 648 aaKnown RBP14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 NBPF9Q3BBW0 867 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 CAVIN4Q5BKX8 364 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 VGLL2Q8N8G2 317 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 CDCA5Q96FF9 252 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 MEIS3Q99687 375 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 FBXO3Q9UK99 471 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 SZT2Q5T011 3432 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 OTOFQ9HC10 1997 aa14.21□□□□□ -0.13
NUDCD3-206ENST00000475952 FAM205AQ6ZU69 1335 aa14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 RBBP6Q7Z6E9 1792 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 PTPN12Q05209 780 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 ZKSCAN2Q63HK3 967 aa14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 RASAL3Q86YV0 1011 aa14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 APOBEC3FQ8IUX4 373 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 TDRD7Q8NHU6 1098 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 FAM84BQ96KN1 310 aaPredicted RBP14.2□□□□□ -0.14
NUDCD3-206ENST00000475952 F8W031 263 aaPredicted RBP14.19□□□□□ -0.14
NUDCD3-206ENST00000475952 CIAO1O76071 339 aa14.19□□□□□ -0.14
NUDCD3-206ENST00000475952 IFIT1P09914 478 aaKnown RBP14.19□□□□□ -0.14
NUDCD3-206ENST00000475952 MFSD14BQ5SR56 506 aa14.19□□□□□ -0.14
NUDCD3-206ENST00000475952 CERS5Q8N5B7 392 aa14.19□□□□□ -0.14
NUDCD3-206ENST00000475952 JAG2Q9Y219 1238 aa14.19□□□□□ -0.14
NUDCD3-206ENST00000475952 MYO1BO43795 1136 aa14.18□□□□□ -0.14
NUDCD3-206ENST00000475952 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
NUDCD3-206ENST00000475952 SLC5A1P13866 664 aa14.18□□□□□ -0.14
NUDCD3-206ENST00000475952 DLGAP5Q15398 846 aa14.18□□□□□ -0.14
NUDCD3-206ENST00000475952 MTMR14Q8NCE2 650 aa14.18□□□□□ -0.14
NUDCD3-206ENST00000475952 CLUAP1Q96AJ1 413 aa14.18□□□□□ -0.14
NUDCD3-206ENST00000475952 SIL1Q9H173 461 aa14.18□□□□□ -0.14
NUDCD3-206ENST00000475952 NF2P35240 595 aa14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 IL15P40933 162 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 FKBP1BP68106 108 aa14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 PKN2Q16513 984 aaKnown RBP14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 FBXO33Q7Z6M2 555 aa14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 FTSJ3Q8IY81 847 aaKnown RBP14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 TBC1D22AQ8WUA7 517 aa14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 LPIN2Q92539 896 aa14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 ZBED3Q96IU2 234 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-206ENST00000475952 COPRSQ9NQ92 184 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms