RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OGFOD1Q8N543 542 aa19.49■□□□□ 0.71
CPSF3-203ENST00000475482 CERS5Q8N5B7 392 aa19.49■□□□□ 0.71
CPSF3-203ENST00000475482 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
CPSF3-203ENST00000475482 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
CPSF3-203ENST00000475482 NBPF9Q3BBW0 867 aa19.48■□□□□ 0.71
CPSF3-203ENST00000475482 C20orf194Q5TEA3 1177 aa19.48■□□□□ 0.71
CPSF3-203ENST00000475482 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
CPSF3-203ENST00000475482 EXOC6Q8TAG9 804 aa19.48■□□□□ 0.71
CPSF3-203ENST00000475482 FAM205AQ6ZU69 1335 aa19.48■□□□□ 0.71
CPSF3-203ENST00000475482 FOXN1O15353 648 aa19.47■□□□□ 0.71
CPSF3-203ENST00000475482 SASH1O94885 1247 aa19.47■□□□□ 0.71
CPSF3-203ENST00000475482 TRIM27P14373 513 aa19.47■□□□□ 0.71
CPSF3-203ENST00000475482 INTS3Q68E01 1043 aaKnown RBP19.47■□□□□ 0.71
CPSF3-203ENST00000475482 KIAA0825Q8IV33 1275 aa19.47■□□□□ 0.71
CPSF3-203ENST00000475482 FBXW7Q969H0 707 aa19.47■□□□□ 0.71
CPSF3-203ENST00000475482 FAM84BQ96KN1 310 aaPredicted RBP19.47■□□□□ 0.71
CPSF3-203ENST00000475482 ZNF408Q9H9D4 720 aa19.47■□□□□ 0.71
CPSF3-203ENST00000475482 GBA2Q9HCG7 927 aaPredicted RBP19.47■□□□□ 0.71
CPSF3-203ENST00000475482 MAP2K2P36507 400 aa19.46■□□□□ 0.71
CPSF3-203ENST00000475482 MAP2K1Q02750 393 aaPredicted RBP19.46■□□□□ 0.71
CPSF3-203ENST00000475482 PTPN12Q05209 780 aaKnown RBP19.46■□□□□ 0.71
CPSF3-203ENST00000475482 MTMR14Q8NCE2 650 aa19.46■□□□□ 0.71
CPSF3-203ENST00000475482 KLHDC4Q8TBB5 520 aa19.46■□□□□ 0.71
CPSF3-203ENST00000475482 CDCA5Q96FF9 252 aa19.46■□□□□ 0.71
CPSF3-203ENST00000475482 PDE8BO95263 885 aa19.45■□□□□ 0.7
CPSF3-203ENST00000475482 UBTFL1P0CB47 393 aaPredicted RBP19.45■□□□□ 0.7
CPSF3-203ENST00000475482 FBXO33Q7Z6M2 555 aa19.45■□□□□ 0.7
CPSF3-203ENST00000475482 HDAC9Q9UKV0 1011 aa19.45■□□□□ 0.7
CPSF3-203ENST00000475482 ECM29Q5VYK3 1845 aa19.45■□□□□ 0.7
CPSF3-203ENST00000475482 FGFR2P21802 821 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 HIBADHP31937 336 aaKnown RBP19.44■□□□□ 0.7
CPSF3-203ENST00000475482 GYG1P46976 350 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 HUNKP57058 714 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 MVPQ14764 893 aaKnown RBP19.44■□□□□ 0.7
CPSF3-203ENST00000475482 C2orf69Q8N8R5 385 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 PANK1Q8TE04 598 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 CLUAP1Q96AJ1 413 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 CCDC136Q96JN2 1154 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 FBXO3Q9UK99 471 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 DDX19BQ9UMR2 479 aa19.44■□□□□ 0.7
CPSF3-203ENST00000475482 ARAP2Q8WZ64 1704 aa19.43■□□□□ 0.7
CPSF3-203ENST00000475482 EYA2O00167 538 aa19.43■□□□□ 0.7
CPSF3-203ENST00000475482 CTCFP49711 727 aaPredicted RBP19.43■□□□□ 0.7
CPSF3-203ENST00000475482 METTL24Q5JXM2 366 aa19.43■□□□□ 0.7
CPSF3-203ENST00000475482 PAXIP1Q6ZW49 1069 aaPredicted RBP19.43■□□□□ 0.7
CPSF3-203ENST00000475482 PRDM10Q9NQV6 1147 aa19.43■□□□□ 0.7
CPSF3-203ENST00000475482 COG6Q9Y2V7 657 aa19.43■□□□□ 0.7
CPSF3-203ENST00000475482 PAPPA2Q9BXP8 1791 aa19.42■□□□□ 0.7
CPSF3-203ENST00000475482 FAM155AB1AL88 458 aaPredicted RBP19.42■□□□□ 0.7
CPSF3-203ENST00000475482 AOC2O75106 756 aa19.42■□□□□ 0.7
CPSF3-203ENST00000475482 FKBP1BP68106 108 aa19.42■□□□□ 0.7
CPSF3-203ENST00000475482 ATG9AQ7Z3C6 839 aa19.42■□□□□ 0.7
CPSF3-203ENST00000475482 AIDAQ96BJ3 306 aa19.42■□□□□ 0.7
CPSF3-203ENST00000475482 MEIS3Q99687 375 aa19.42■□□□□ 0.7
CPSF3-203ENST00000475482 HDAC5Q9UQL6 1122 aa19.42■□□□□ 0.7
CPSF3-203ENST00000475482 RGMBQ6NW40 437 aa19.41■□□□□ 0.7
CPSF3-203ENST00000475482 LRRFIP2Q9Y608 721 aaKnown RBP19.41■□□□□ 0.7
CPSF3-203ENST00000475482 CIAO1O76071 339 aa19.4■□□□□ 0.7
CPSF3-203ENST00000475482 RLBP1P12271 317 aa19.4■□□□□ 0.7
CPSF3-203ENST00000475482 NOGQ13253 232 aa19.4■□□□□ 0.7
CPSF3-203ENST00000475482 ITPRIPQ8IWB1 547 aa19.4■□□□□ 0.7
CPSF3-203ENST00000475482 SCAF8Q9UPN6 1271 aaKnown RBP19.4■□□□□ 0.7
CPSF3-203ENST00000475482 HSPA8P11142 646 aaKnown RBP19.39■□□□□ 0.69
CPSF3-203ENST00000475482 GRM1Q13255 1194 aa19.39■□□□□ 0.69
CPSF3-203ENST00000475482 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.69
CPSF3-203ENST00000475482 DLGAP5Q15398 846 aa19.39■□□□□ 0.69
CPSF3-203ENST00000475482 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
CPSF3-203ENST00000475482 ZIC5Q96T25 663 aa19.39■□□□□ 0.69
CPSF3-203ENST00000475482 JAG2Q9Y219 1238 aa19.39■□□□□ 0.69
CPSF3-203ENST00000475482 PCDHAC2Q9Y5I4 1007 aa19.39■□□□□ 0.69
CPSF3-203ENST00000475482 SPDYE2BA6NHP3 402 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 COL1A1P02452 1464 aaPredicted RBP19.38■□□□□ 0.69
CPSF3-203ENST00000475482 SPDYE6P0CI01 402 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 MTX1Q13505 466 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 CFAP100Q494V2 611 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 CAVIN4Q5BKX8 364 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 MFSD14BQ5SR56 506 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 TMEM57Q8N5G2 664 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 CCDC102AQ96A19 550 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 PRMT6Q96LA8 375 aaPredicted RBP19.38■□□□□ 0.69
CPSF3-203ENST00000475482 COPRSQ9NQ92 184 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 TNNQ9UQP3 1299 aa19.38■□□□□ 0.69
CPSF3-203ENST00000475482 GNAI3P08754 354 aa19.37■□□□□ 0.69
CPSF3-203ENST00000475482 BCAMP50895 628 aa19.37■□□□□ 0.69
CPSF3-203ENST00000475482 PRAMEF18Q5VWM3 479 aa19.37■□□□□ 0.69
CPSF3-203ENST00000475482 LPIN2Q92539 896 aa19.37■□□□□ 0.69
CPSF3-203ENST00000475482 AOX1Q06278 1338 aa19.36■□□□□ 0.69
CPSF3-203ENST00000475482 F8W031 263 aaPredicted RBP19.36■□□□□ 0.69
CPSF3-203ENST00000475482 ZBTB22O15209 634 aa19.36■□□□□ 0.69
CPSF3-203ENST00000475482 SLC10A3P09131 477 aa19.36■□□□□ 0.69
CPSF3-203ENST00000475482 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
CPSF3-203ENST00000475482 LBX1P52954 281 aa19.36■□□□□ 0.69
CPSF3-203ENST00000475482 SERPINA10Q9UK55 444 aa19.36■□□□□ 0.69
CPSF3-203ENST00000475482 MYH13Q9UKX3 1938 aa19.35■□□□□ 0.69
CPSF3-203ENST00000475482 CA12O43570 354 aa19.35■□□□□ 0.69
CPSF3-203ENST00000475482 ZNF157P51786 506 aaPredicted RBP19.35■□□□□ 0.69
CPSF3-203ENST00000475482 B4GALNT3Q6L9W6 998 aa19.35■□□□□ 0.69
CPSF3-203ENST00000475482 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
CPSF3-203ENST00000475482 TNS4Q8IZW8 715 aa19.35■□□□□ 0.69
CPSF3-203ENST00000475482 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms