RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TAF5LO75529 589 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 CASP7P55210 303 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 ZNF804AQ7Z570 1209 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 DNAAF4Q8WXU2 420 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 WNK4Q96J92 1243 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 VEZTQ9HBM0 779 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 PCDHAC2Q9Y5I4 1007 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 PPP2R3BQ9Y5P8 575 aa26.1■■□□□ 1.77
VPS36-203ENST00000475375 ZBTB48P10074 688 aaPredicted RBP26.09■■□□□ 1.77
VPS36-203ENST00000475375 SUPT20HL1Q3ZLR7 823 aa26.09■■□□□ 1.77
VPS36-203ENST00000475375 CFAP100Q494V2 611 aa26.09■■□□□ 1.77
VPS36-203ENST00000475375 LINS1Q8NG48 757 aa26.09■■□□□ 1.77
VPS36-203ENST00000475375 RBM5P52756 815 aaKnown RBP eCLIP26.08■■□□□ 1.77
VPS36-203ENST00000475375 IFIT5Q13325 482 aaKnown RBP26.08■■□□□ 1.77
VPS36-203ENST00000475375 MAP3K11Q16584 847 aa26.08■■□□□ 1.77
VPS36-203ENST00000475375 MTMR14Q8NCE2 650 aa26.08■■□□□ 1.77
VPS36-203ENST00000475375 JAG2Q9Y219 1238 aa26.08■■□□□ 1.77
VPS36-203ENST00000475375 IGF2BP3O00425 579 aaKnown RBP eCLIP26.07■■□□□ 1.76
VPS36-203ENST00000475375 OTOP1Q7RTM1 612 aa26.07■■□□□ 1.76
VPS36-203ENST00000475375 WWC1Q8IX03 1113 aa26.07■■□□□ 1.76
VPS36-203ENST00000475375 HTTP42858 3142 aa26.07■■□□□ 1.76
VPS36-203ENST00000475375 SSC5DA1L4H1 1573 aa26.07■■□□□ 1.76
VPS36-203ENST00000475375 SPDYE2BA6NHP3 402 aa26.06■■□□□ 1.76
VPS36-203ENST00000475375 SPDYE6P0CI01 402 aa26.06■■□□□ 1.76
VPS36-203ENST00000475375 IREB2P48200 963 aaKnown RBP26.06■■□□□ 1.76
VPS36-203ENST00000475375 NBPF12Q5TAG4 269 aaPredicted RBP26.05■■□□□ 1.76
VPS36-203ENST00000475375 OTUD7BQ6GQQ9 843 aa26.05■■□□□ 1.76
VPS36-203ENST00000475375 PLIN1O60240 522 aa26.04■■□□□ 1.76
VPS36-203ENST00000475375 CCDC27Q2M243 656 aa26.04■■□□□ 1.76
VPS36-203ENST00000475375 C15orf52Q6ZUT6 534 aaKnown RBP26.04■■□□□ 1.76
VPS36-203ENST00000475375 GCC1Q96CN9 775 aa26.04■■□□□ 1.76
VPS36-203ENST00000475375 ERO1AQ96HE7 468 aa26.04■■□□□ 1.76
VPS36-203ENST00000475375 PRMT6Q96LA8 375 aaPredicted RBP26.04■■□□□ 1.76
VPS36-203ENST00000475375 IRS2Q9Y4H2 1338 aa26.04■■□□□ 1.76
VPS36-203ENST00000475375 IL1R1P14778 569 aa26.03■■□□□ 1.76
VPS36-203ENST00000475375 TAF7LQ5H9L4 462 aa26.03■■□□□ 1.76
VPS36-203ENST00000475375 INTS3Q68E01 1043 aaKnown RBP26.03■■□□□ 1.76
VPS36-203ENST00000475375 MKI67P46013 3256 aaKnown RBP26.03■■□□□ 1.76
VPS36-203ENST00000475375 CENPFP49454 3210 aa26.02■■□□□ 1.76
VPS36-203ENST00000475375 UNCXA6NJT0 531 aa26.02■■□□□ 1.76
VPS36-203ENST00000475375 CRHR2Q13324 411 aa26.02■■□□□ 1.76
VPS36-203ENST00000475375 RASA3Q14644 834 aa26.02■■□□□ 1.76
VPS36-203ENST00000475375 CD99L2Q8TCZ2 262 aa26.02■■□□□ 1.76
VPS36-203ENST00000475375 POTEFA5A3E0 1075 aa26.01■■□□□ 1.75
VPS36-203ENST00000475375 FKBP1AP62942 108 aaKnown RBP26.01■■□□□ 1.75
VPS36-203ENST00000475375 FOXO4P98177 505 aa26.01■■□□□ 1.75
VPS36-203ENST00000475375 ANKRD13AQ8IZ07 590 aa26.01■■□□□ 1.75
VPS36-203ENST00000475375 AOX1Q06278 1338 aa26■■□□□ 1.75
VPS36-203ENST00000475375 IL16Q14005 1332 aa26■■□□□ 1.75
VPS36-203ENST00000475375 USP2O75604 605 aaPredicted RBP26■■□□□ 1.75
VPS36-203ENST00000475375 CCDC57Q2TAC2 916 aa26■■□□□ 1.75
VPS36-203ENST00000475375 CNNM1Q9NRU3 951 aa26■■□□□ 1.75
VPS36-203ENST00000475375 PTPN22Q9Y2R2 807 aa26■■□□□ 1.75
VPS36-203ENST00000475375 ECM29Q5VYK3 1845 aa26■■□□□ 1.75
VPS36-203ENST00000475375 GJA5P36382 358 aa25.99■■□□□ 1.75
VPS36-203ENST00000475375 LMBR1LQ6UX01 489 aa25.99■■□□□ 1.75
VPS36-203ENST00000475375 LDHAL6AQ6ZMR3 332 aa25.99■■□□□ 1.75
VPS36-203ENST00000475375 ZNF594Q96JF6 807 aaPredicted RBP25.99■■□□□ 1.75
VPS36-203ENST00000475375 EFCC1Q9HA90 598 aa25.99■■□□□ 1.75
VPS36-203ENST00000475375 FANCIQ9NVI1 1328 aa25.98■■□□□ 1.75
VPS36-203ENST00000475375 F6X3S4 739 aa25.98■■□□□ 1.75
VPS36-203ENST00000475375 TNFAIP1Q13829 316 aa25.98■■□□□ 1.75
VPS36-203ENST00000475375 ELP3Q9H9T3 547 aa25.98■■□□□ 1.75
VPS36-203ENST00000475375 SP3Q02447 781 aa25.97■■□□□ 1.75
VPS36-203ENST00000475375 CCDC184Q52MB2 194 aa25.97■■□□□ 1.75
VPS36-203ENST00000475375 OPTNQ96CV9 577 aa25.96■■□□□ 1.75
VPS36-203ENST00000475375 PTPN18Q99952 460 aa25.96■■□□□ 1.75
VPS36-203ENST00000475375 ZNF70Q9UC06 446 aaPredicted RBP25.96■■□□□ 1.75
VPS36-203ENST00000475375 TTF2Q9UNY4 1162 aaKnown RBP25.96■■□□□ 1.75
VPS36-203ENST00000475375 MFSD14BQ5SR56 506 aa25.95■■□□□ 1.74
VPS36-203ENST00000475375 BEND3Q5T5X7 828 aa25.95■■□□□ 1.74
VPS36-203ENST00000475375 TDRD3Q9H7E2 651 aaKnown RBP25.95■■□□□ 1.74
VPS36-203ENST00000475375 SALL2Q9Y467 1007 aaPredicted RBP25.95■■□□□ 1.74
VPS36-203ENST00000475375 A0A1B0GUL6 1792 aa25.95■■□□□ 1.74
VPS36-203ENST00000475375 VAMP4O75379 141 aa25.94■■□□□ 1.74
VPS36-203ENST00000475375 SPDYE2Q495Y8 402 aa25.94■■□□□ 1.74
VPS36-203ENST00000475375 EPHA10Q5JZY3 1008 aa25.94■■□□□ 1.74
VPS36-203ENST00000475375 FAM205AQ6ZU69 1335 aa25.93■■□□□ 1.74
VPS36-203ENST00000475375 SERPINA10Q9UK55 444 aa25.93■■□□□ 1.74
VPS36-203ENST00000475375 TESPA1A2RU30 521 aaPredicted RBP25.92■■□□□ 1.74
VPS36-203ENST00000475375 TCP10L2B9ZVM9 353 aa25.92■■□□□ 1.74
VPS36-203ENST00000475375 GRM8O00222 908 aa25.92■■□□□ 1.74
VPS36-203ENST00000475375 EN2P19622 333 aaPredicted RBP25.92■■□□□ 1.74
VPS36-203ENST00000475375 GYG1P46976 350 aa25.92■■□□□ 1.74
VPS36-203ENST00000475375 EXOSC9Q06265 439 aaKnown RBP25.92■■□□□ 1.74
VPS36-203ENST00000475375 HABP4Q5JVS0 413 aaKnown RBP25.92■■□□□ 1.74
VPS36-203ENST00000475375 ARMC5Q96C12 935 aa25.92■■□□□ 1.74
VPS36-203ENST00000475375 TMEM106CQ9BVX2 250 aa25.92■■□□□ 1.74
VPS36-203ENST00000475375 C9orf78Q9NZ63 289 aaPredicted RBP25.92■■□□□ 1.74
VPS36-203ENST00000475375 BRCA2P51587 3418 aa25.91■■□□□ 1.74
VPS36-203ENST00000475375 HIBADHP31937 336 aaKnown RBP25.91■■□□□ 1.74
VPS36-203ENST00000475375 TAF1CQ15572 869 aaPredicted RBP25.91■■□□□ 1.74
VPS36-203ENST00000475375 DZIP1LQ8IYY4 767 aaKnown RBP25.91■■□□□ 1.74
VPS36-203ENST00000475375 TDRD7Q8NHU6 1098 aaKnown RBP25.91■■□□□ 1.74
VPS36-203ENST00000475375 LAMB1P07942 1786 aa25.91■■□□□ 1.74
VPS36-203ENST00000475375 KIAA0100Q14667 2235 aaKnown RBP25.91■■□□□ 1.74
VPS36-203ENST00000475375 CCL15-CCL14A0A0B4J2E2 113 aa25.9■■□□□ 1.74
VPS36-203ENST00000475375 ARHGEF6Q15052 776 aa25.9■■□□□ 1.74
VPS36-203ENST00000475375 CCL15Q16663 113 aa25.9■■□□□ 1.74
VPS36-203ENST00000475375 CNKSR2Q8WXI2 1034 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms