RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 ZBTB22O15209 634 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 UFL1O94874 794 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 MAP3K12Q12852 859 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 C15orf52Q6ZUT6 534 aaKnown RBP16.48■□□□□ 0.23
TRAF4-210ENST00000475329 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 GGA1Q9UJY5 639 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 CHD4Q14839 1912 aa16.48■□□□□ 0.23
TRAF4-210ENST00000475329 H0YIN7 160 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 M0R2C6 588 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 ST18O60284 1047 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 PDE6AP16499 860 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 UBE3CQ15386 1083 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 SLC9C2Q5TAH2 1124 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 ZNF804AQ7Z570 1209 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 SLC51AQ86UW1 340 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 IL27Q8NEV9 243 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-210ENST00000475329 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
TRAF4-210ENST00000475329 IQSEC3Q9UPP2 1182 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-210ENST00000475329 SNX14Q9Y5W7 946 aa16.47■□□□□ 0.23
TRAF4-210ENST00000475329 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-210ENST00000475329 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-210ENST00000475329 NECTIN1Q15223 517 aa16.46■□□□□ 0.23
TRAF4-210ENST00000475329 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
TRAF4-210ENST00000475329 KCNB2Q92953 911 aa16.46■□□□□ 0.23
TRAF4-210ENST00000475329 OSBP2Q969R2 916 aa16.46■□□□□ 0.23
TRAF4-210ENST00000475329 DSCC1Q9BVC3 393 aa16.46■□□□□ 0.23
TRAF4-210ENST00000475329 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
TRAF4-210ENST00000475329 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-210ENST00000475329 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
TRAF4-210ENST00000475329 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
TRAF4-210ENST00000475329 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAF4-210ENST00000475329 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-210ENST00000475329 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
TRAF4-210ENST00000475329 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
TRAF4-210ENST00000475329 TCRBV5S4A2TA0A5A2 114 aa16.44■□□□□ 0.22
TRAF4-210ENST00000475329 SLC27A2O14975 620 aa16.44■□□□□ 0.22
TRAF4-210ENST00000475329 TXNRD3Q86VQ6 643 aa16.44■□□□□ 0.22
TRAF4-210ENST00000475329 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
TRAF4-210ENST00000475329 MAGEB6Q8N7X4 407 aa16.44■□□□□ 0.22
TRAF4-210ENST00000475329 TBC1D16Q8TBP0 767 aa16.44■□□□□ 0.22
TRAF4-210ENST00000475329 K7ELQ4 463 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-210ENST00000475329 GPAA1O43292 621 aa16.43■□□□□ 0.22
TRAF4-210ENST00000475329 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
TRAF4-210ENST00000475329 NEK4P51957 841 aa16.43■□□□□ 0.22
TRAF4-210ENST00000475329 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
TRAF4-210ENST00000475329 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
TRAF4-210ENST00000475329 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
TRAF4-210ENST00000475329 HSPD1P10809 573 aaKnown RBP16.42■□□□□ 0.22
TRAF4-210ENST00000475329 CHAF1AQ13111 956 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-210ENST00000475329 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
TRAF4-210ENST00000475329 TDRD7Q8NHU6 1098 aaKnown RBP16.42■□□□□ 0.22
TRAF4-210ENST00000475329 GPR101Q96P66 508 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-210ENST00000475329 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
TRAF4-210ENST00000475329 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
TRAF4-210ENST00000475329 POLLQ9UGP5 575 aa16.42■□□□□ 0.22
TRAF4-210ENST00000475329 MYH2Q9UKX2 1941 aa16.42■□□□□ 0.22
TRAF4-210ENST00000475329 RPAP1Q9BWH6 1393 aaPredicted RBP16.41■□□□□ 0.22
TRAF4-210ENST00000475329 CHRNA5P30532 468 aa16.41■□□□□ 0.22
TRAF4-210ENST00000475329 MCM2P49736 904 aa16.41■□□□□ 0.22
TRAF4-210ENST00000475329 KRT32Q14532 448 aa16.41■□□□□ 0.22
TRAF4-210ENST00000475329 MPNDQ8N594 471 aa16.41■□□□□ 0.22
TRAF4-210ENST00000475329 ZGPATQ8N5A5 531 aaKnown RBP16.41■□□□□ 0.22
TRAF4-210ENST00000475329 AIDAQ96BJ3 306 aa16.41■□□□□ 0.22
TRAF4-210ENST00000475329 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
TRAF4-210ENST00000475329 TM6SF1Q9BZW5 370 aa16.41■□□□□ 0.22
TRAF4-210ENST00000475329 BRCA1P38398 1863 aaKnown RBP16.41■□□□□ 0.22
TRAF4-210ENST00000475329 SALL1Q9NSC2 1324 aa16.41■□□□□ 0.22
TRAF4-210ENST00000475329 IGSF3O75054 1194 aa16.4■□□□□ 0.22
TRAF4-210ENST00000475329 PSMA5P28066 241 aa16.4■□□□□ 0.22
TRAF4-210ENST00000475329 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
TRAF4-210ENST00000475329 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-210ENST00000475329 TMED8Q6PL24 325 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-210ENST00000475329 DPP8Q6V1X1 898 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-210ENST00000475329 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
TRAF4-210ENST00000475329 UPF3BQ9BZI7 483 aaKnown RBP16.4■□□□□ 0.22
TRAF4-210ENST00000475329 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
TRAF4-210ENST00000475329 LAMB1P07942 1786 aa16.39■□□□□ 0.21
TRAF4-210ENST00000475329 MBD4O95243 580 aa16.39■□□□□ 0.21
TRAF4-210ENST00000475329 IL1R1P14778 569 aa16.39■□□□□ 0.21
TRAF4-210ENST00000475329 CASTP20810 708 aaKnown RBP16.39■□□□□ 0.21
TRAF4-210ENST00000475329 CYP7A1P22680 504 aa16.39■□□□□ 0.21
TRAF4-210ENST00000475329 MTFR1LQ9H019 292 aa16.39■□□□□ 0.21
TRAF4-210ENST00000475329 CD209Q9NNX6 404 aa16.39■□□□□ 0.21
TRAF4-210ENST00000475329 CYP46A1Q9Y6A2 500 aa16.39■□□□□ 0.21
TRAF4-210ENST00000475329 ZBTB7AO95365 584 aa16.38■□□□□ 0.21
TRAF4-210ENST00000475329 POLD1P28340 1107 aa16.38■□□□□ 0.21
TRAF4-210ENST00000475329 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
TRAF4-210ENST00000475329 EYA3Q99504 573 aa16.38■□□□□ 0.21
TRAF4-210ENST00000475329 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
TRAF4-210ENST00000475329 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
TRAF4-210ENST00000475329 ZNF646O15015 1829 aaPredicted RBP16.38■□□□□ 0.21
TRAF4-210ENST00000475329 PSME4Q14997 1843 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms