RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
ITGA6-210ENST00000475302 WNT2BQ93097 391 aa11.78□□□□□ -0.52
ITGA6-210ENST00000475302 CHMP3Q9Y3E7 222 aa11.78□□□□□ -0.52
ITGA6-210ENST00000475302 ANKRD18BA2A2Z9 1011 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 SMAPO00193 183 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 SGSM2O43147 1006 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 RXRBP28702 533 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 TIMM10P62072 90 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
ITGA6-210ENST00000475302 POTEAQ6S8J7 498 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 FBXO41Q8TF61 875 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
ITGA6-210ENST00000475302 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
ITGA6-210ENST00000475302 A0A1B0GUL7 405 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 MAP4K4O95819 1239 aaPredicted RBP11.76□□□□□ -0.53
ITGA6-210ENST00000475302 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 ERFEQ4G0M1 354 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 PADI6Q6TGC4 694 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 CNTROBQ8N137 903 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
ITGA6-210ENST00000475302 RILPL2Q969X0 211 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 GPATCH3Q96I76 525 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 HAUS7Q99871 368 aa11.76□□□□□ -0.53
ITGA6-210ENST00000475302 REC8O95072 547 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 FGFR2P21802 821 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 PTPN5P54829 565 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 PTGDRQ13258 359 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 CASC1Q6TDU7 716 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 TICAM2Q86XR7 235 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 SNX21Q969T3 373 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 CEP126Q9P2H0 1117 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
ITGA6-210ENST00000475302 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
ITGA6-210ENST00000475302 CASZ1Q86V15 1759 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 AK9Q5TCS8 1911 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 PDE8BO95263 885 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 HSP90B1P14625 803 aaKnown RBP11.74□□□□□ -0.53
ITGA6-210ENST00000475302 TM4SF1P30408 202 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 ADORA1P30542 326 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 LDHAL6AQ6ZMR3 332 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 ZNF512BQ96KM6 892 aaPredicted RBP11.74□□□□□ -0.53
ITGA6-210ENST00000475302 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
ITGA6-210ENST00000475302 LSG1Q9H089 658 aaKnown RBP11.74□□□□□ -0.53
ITGA6-210ENST00000475302 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 RFX7Q2KHR2 1363 aa11.74□□□□□ -0.53
ITGA6-210ENST00000475302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
ITGA6-210ENST00000475302 RGPD3A6NKT7 1758 aaPredicted RBP11.73□□□□□ -0.53
ITGA6-210ENST00000475302 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 ZPR1O75312 459 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 SSFA2P28290 1259 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 SLC4A3P48751 1232 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 NFIXQ14938 502 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 CCDC152Q4G0S7 254 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 RGPD4Q7Z3J3 1758 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 TTC13Q8NBP0 860 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 KCNB2Q92953 911 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
ITGA6-210ENST00000475302 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
ITGA6-210ENST00000475302 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 MROH5Q6ZUA9 1318 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 GYS1P13807 737 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 RFC4P35249 363 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 BCAMP50895 628 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 TATDN2Q93075 761 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 NYXQ9GZU5 481 aa11.72□□□□□ -0.53
ITGA6-210ENST00000475302 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
ITGA6-210ENST00000475302 MED23Q9ULK4 1368 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
ITGA6-210ENST00000475302 HSPA4P34932 840 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 ZNF827Q17R98 1081 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 TAF7LQ5H9L4 462 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 KBTBD3Q8NAB2 608 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 ANKK1Q8NFD2 765 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 NEUROD6Q96NK8 337 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 PALD1Q9ULE6 856 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 NDUFB9Q9Y6M9 179 aa11.71□□□□□ -0.53
ITGA6-210ENST00000475302 A0A1B0GUL6 1792 aa11.71□□□□□ -0.54
ITGA6-210ENST00000475302 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.54
ITGA6-210ENST00000475302 RAD50Q92878 1312 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 HIP1O00291 1037 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 CD2BP2O95400 341 aaKnown RBP11.7□□□□□ -0.54
ITGA6-210ENST00000475302 ANAPC15P60006 121 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 NMIQ13287 307 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-210ENST00000475302 SCARF1Q14162 830 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 CWC27Q6UX04 472 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms