RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 TRPA1O75762 1119 aa13.96□□□□□ -0.17
SEMA4D-216ENST00000474258 FKBP1AP62942 108 aaKnown RBP13.96□□□□□ -0.17
SEMA4D-216ENST00000474258 DLGAP5Q15398 846 aa13.96□□□□□ -0.17
SEMA4D-216ENST00000474258 MRPL50Q8N5N7 158 aaKnown RBP13.96□□□□□ -0.17
SEMA4D-216ENST00000474258 SUCLG2Q96I99 432 aa13.96□□□□□ -0.17
SEMA4D-216ENST00000474258 UTYO14607 1347 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 PTPRCP08575 1304 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 CCDC85CA6NKD9 419 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 NBPF7P0C2Y1 421 aaPredicted RBP13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 DGKZQ13574 1117 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 UBE4AQ14139 1066 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 ARMC9Q7Z3E5 817 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 CERS5Q8N5B7 392 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 MTMR14Q8NCE2 650 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 KAZALD1Q96I82 304 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 MCOLN1Q9GZU1 580 aa13.95□□□□□ -0.18
SEMA4D-216ENST00000474258 F8W031 263 aaPredicted RBP13.94□□□□□ -0.18
SEMA4D-216ENST00000474258 COL1A1P02452 1464 aaPredicted RBP13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 MYO1BO43795 1136 aa13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 SLFN5Q08AF3 891 aa13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 RABL6Q3YEC7 729 aaPredicted RBP13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 PUS3Q9BZE2 481 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 RIPOR2Q9Y4F9 1068 aa13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 ARAP2Q8WZ64 1704 aa13.93□□□□□ -0.18
SEMA4D-216ENST00000474258 MROH5Q6ZUA9 1318 aa13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 MYH13Q9UKX3 1938 aa13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 HIBADHP31937 336 aaKnown RBP13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 CFAP100Q494V2 611 aa13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 TDRD7Q8NHU6 1098 aaKnown RBP13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 SSH1Q8WYL5 1049 aa13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 FAM84BQ96KN1 310 aaPredicted RBP13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 DEFB129Q9H1M3 183 aa13.92□□□□□ -0.18
SEMA4D-216ENST00000474258 FAM205AQ6ZU69 1335 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 GYG1P46976 350 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 PTPN12Q05209 780 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 PRKG1Q13976 671 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 ALDH1L2Q3SY69 923 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 YTHDC1Q96MU7 727 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 ANGEL1Q9UNK9 670 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 JAG2Q9Y219 1238 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 PCDHAC2Q9Y5I4 1007 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 PPP2R3BQ9Y5P8 575 aa13.91□□□□□ -0.18
SEMA4D-216ENST00000474258 TM4SF4P48230 202 aa13.9□□□□□ -0.18
SEMA4D-216ENST00000474258 MFSD14BQ5SR56 506 aa13.9□□□□□ -0.18
SEMA4D-216ENST00000474258 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
SEMA4D-216ENST00000474258 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
SEMA4D-216ENST00000474258 USP44Q9H0E7 712 aa13.9□□□□□ -0.18
SEMA4D-216ENST00000474258 LAMB1P07942 1786 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 CLRN2A0PK11 232 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 PPP1R12BO60237 982 aaPredicted RBP13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 RGS19P49795 217 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 MKRN3Q13064 507 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 SUPT20HL1Q3ZLR7 823 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 LRRC24Q50LG9 513 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 FBXO33Q7Z6M2 555 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-216ENST00000474258 PDE8BO95263 885 aa13.88□□□□□ -0.19
SEMA4D-216ENST00000474258 SREBF2Q12772 1141 aa13.88□□□□□ -0.19
SEMA4D-216ENST00000474258 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
SEMA4D-216ENST00000474258 CTU1Q7Z7A3 348 aaKnown RBP13.88□□□□□ -0.19
SEMA4D-216ENST00000474258 SLC10A4Q96EP9 437 aa13.88□□□□□ -0.19
SEMA4D-216ENST00000474258 SERPINA10Q9UK55 444 aa13.88□□□□□ -0.19
SEMA4D-216ENST00000474258 UNCXA6NJT0 531 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 FRAT2O75474 233 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 TBC1D8O95759 1140 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 TNFAIP1Q13829 316 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 RASA3Q14644 834 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 TRMT2AQ8IZ69 625 aaKnown RBP13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 VGLL2Q8N8G2 317 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 SMC4Q9NTJ3 1288 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 FZD1Q9UP38 647 aa13.87□□□□□ -0.19
SEMA4D-216ENST00000474258 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 IREB2P48200 963 aaKnown RBP13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 INHBEP58166 350 aa13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 MLLT1Q03111 559 aaPredicted RBP13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 NBPF12Q5TAG4 269 aaPredicted RBP13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 DZIP1LQ8IYY4 767 aaKnown RBP13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 KLHDC4Q8TBB5 520 aa13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 TBC1D22AQ8WUA7 517 aa13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 IQSEC3Q9UPP2 1182 aaPredicted RBP13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 AOX1Q06278 1338 aa13.86□□□□□ -0.19
SEMA4D-216ENST00000474258 OTOFQ9HC10 1997 aa13.85□□□□□ -0.19
SEMA4D-216ENST00000474258 SSC5DA1L4H1 1573 aa13.85□□□□□ -0.19
SEMA4D-216ENST00000474258 MANSC4A6NHS7 340 aaPredicted RBP13.85□□□□□ -0.19
SEMA4D-216ENST00000474258 CENPBP07199 599 aaPredicted RBP13.85□□□□□ -0.19
SEMA4D-216ENST00000474258 IFIT1P09914 478 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms