RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 CAPN15O75808 1086 aa19.86■□□□□ 0.77
CDPF1-205ENST00000474256 PRAMEF18Q5VWM3 479 aa19.86■□□□□ 0.77
CDPF1-205ENST00000474256 MTMR14Q8NCE2 650 aa19.86■□□□□ 0.77
CDPF1-205ENST00000474256 A0A1B0GUL6 1792 aa19.85■□□□□ 0.77
CDPF1-205ENST00000474256 FAM205AQ6ZU69 1335 aa19.85■□□□□ 0.77
CDPF1-205ENST00000474256 SLC10A3P09131 477 aa19.85■□□□□ 0.77
CDPF1-205ENST00000474256 LRRC24Q50LG9 513 aa19.85■□□□□ 0.77
CDPF1-205ENST00000474256 TDRD7Q8NHU6 1098 aaKnown RBP19.85■□□□□ 0.77
CDPF1-205ENST00000474256 FAM84BQ96KN1 310 aaPredicted RBP19.85■□□□□ 0.77
CDPF1-205ENST00000474256 TSKSQ9UJT2 592 aa19.85■□□□□ 0.77
CDPF1-205ENST00000474256 HIBADHP31937 336 aaKnown RBP19.84■□□□□ 0.77
CDPF1-205ENST00000474256 GYG1P46976 350 aa19.84■□□□□ 0.77
CDPF1-205ENST00000474256 DLGAP5Q15398 846 aa19.84■□□□□ 0.77
CDPF1-205ENST00000474256 APOBEC3FQ8IUX4 373 aaKnown RBP19.84■□□□□ 0.77
CDPF1-205ENST00000474256 NOB1Q9ULX3 412 aaKnown RBP19.84■□□□□ 0.77
CDPF1-205ENST00000474256 JAG2Q9Y219 1238 aa19.84■□□□□ 0.77
CDPF1-205ENST00000474256 KIF23Q02241 960 aaPredicted RBP19.83■□□□□ 0.77
CDPF1-205ENST00000474256 MOB2Q70IA6 237 aa19.83■□□□□ 0.77
CDPF1-205ENST00000474256 VGLL2Q8N8G2 317 aa19.83■□□□□ 0.77
CDPF1-205ENST00000474256 F8W031 263 aaPredicted RBP19.82■□□□□ 0.76
CDPF1-205ENST00000474256 PDE8BO95263 885 aa19.82■□□□□ 0.76
CDPF1-205ENST00000474256 METTL24Q5JXM2 366 aa19.82■□□□□ 0.76
CDPF1-205ENST00000474256 FBXO33Q7Z6M2 555 aa19.82■□□□□ 0.76
CDPF1-205ENST00000474256 RASAL3Q86YV0 1011 aa19.82■□□□□ 0.76
CDPF1-205ENST00000474256 KLHDC4Q8TBB5 520 aa19.82■□□□□ 0.76
CDPF1-205ENST00000474256 PAPPA2Q9BXP8 1791 aa19.82■□□□□ 0.76
CDPF1-205ENST00000474256 NF2P35240 595 aa19.81■□□□□ 0.76
CDPF1-205ENST00000474256 RFX5P48382 616 aaPredicted RBP19.81■□□□□ 0.76
CDPF1-205ENST00000474256 RARSP54136 660 aaKnown RBP19.81■□□□□ 0.76
CDPF1-205ENST00000474256 CFAP100Q494V2 611 aa19.81■□□□□ 0.76
CDPF1-205ENST00000474256 API5Q9BZZ5 524 aaKnown RBP19.81■□□□□ 0.76
CDPF1-205ENST00000474256 PCDHAC2Q9Y5I4 1007 aa19.81■□□□□ 0.76
CDPF1-205ENST00000474256 SPDYE2BA6NHP3 402 aa19.8■□□□□ 0.76
CDPF1-205ENST00000474256 UBE2Q2LH0YL09 131 aa19.8■□□□□ 0.76
CDPF1-205ENST00000474256 SPDYE6P0CI01 402 aa19.8■□□□□ 0.76
CDPF1-205ENST00000474256 MFSD14BQ5SR56 506 aa19.8■□□□□ 0.76
CDPF1-205ENST00000474256 PRMT6Q96LA8 375 aaPredicted RBP19.8■□□□□ 0.76
CDPF1-205ENST00000474256 CSRNP1Q96S65 589 aa19.8■□□□□ 0.76
CDPF1-205ENST00000474256 DEFB129Q9H1M3 183 aa19.8■□□□□ 0.76
CDPF1-205ENST00000474256 SAGE1Q9NXZ1 904 aa19.8■□□□□ 0.76
CDPF1-205ENST00000474256 COL1A1P02452 1464 aaPredicted RBP19.79■□□□□ 0.76
CDPF1-205ENST00000474256 MYO1BO43795 1136 aa19.78■□□□□ 0.76
CDPF1-205ENST00000474256 UBTFL1P0CB47 393 aaPredicted RBP19.78■□□□□ 0.76
CDPF1-205ENST00000474256 PTPN12Q05209 780 aaKnown RBP19.78■□□□□ 0.76
CDPF1-205ENST00000474256 REM2Q8IYK8 340 aaPredicted RBP19.78■□□□□ 0.76
CDPF1-205ENST00000474256 PPP2R3BQ9Y5P8 575 aa19.78■□□□□ 0.76
CDPF1-205ENST00000474256 EYA2O00167 538 aa19.77■□□□□ 0.76
CDPF1-205ENST00000474256 FGFR2P21802 821 aa19.77■□□□□ 0.76
CDPF1-205ENST00000474256 TTLL12Q14166 644 aaPredicted RBP19.77■□□□□ 0.76
CDPF1-205ENST00000474256 CAVIN4Q5BKX8 364 aa19.77■□□□□ 0.76
CDPF1-205ENST00000474256 VPS37DQ86XT2 251 aa19.77■□□□□ 0.76
CDPF1-205ENST00000474256 ARHGAP45Q92619 1136 aa19.77■□□□□ 0.76
CDPF1-205ENST00000474256 RNF186Q9NXI6 227 aa19.77■□□□□ 0.76
CDPF1-205ENST00000474256 SERPINA10Q9UK55 444 aa19.77■□□□□ 0.76
CDPF1-205ENST00000474256 TTF2Q9UNY4 1162 aaKnown RBP19.77■□□□□ 0.76
CDPF1-205ENST00000474256 AOX1Q06278 1338 aa19.76■□□□□ 0.75
CDPF1-205ENST00000474256 KIF16BQ96L93 1317 aa19.76■□□□□ 0.75
CDPF1-205ENST00000474256 CLRN2A0PK11 232 aa19.76■□□□□ 0.75
CDPF1-205ENST00000474256 PUM3Q15397 648 aaKnown RBP19.76■□□□□ 0.75
CDPF1-205ENST00000474256 ARMC9Q7Z3E5 817 aa19.76■□□□□ 0.75
CDPF1-205ENST00000474256 ABHD8Q96I13 439 aa19.76■□□□□ 0.75
CDPF1-205ENST00000474256 BCAMP50895 628 aa19.75■□□□□ 0.75
CDPF1-205ENST00000474256 RBM5P52756 815 aaKnown RBP eCLIP19.75■□□□□ 0.75
CDPF1-205ENST00000474256 LDLRAD1Q5T700 205 aa19.75■□□□□ 0.75
CDPF1-205ENST00000474256 ATG9AQ7Z3C6 839 aa19.75■□□□□ 0.75
CDPF1-205ENST00000474256 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
CDPF1-205ENST00000474256 IQSEC3Q9UPP2 1182 aaPredicted RBP19.75■□□□□ 0.75
CDPF1-205ENST00000474256 TRPA1O75762 1119 aa19.74■□□□□ 0.75
CDPF1-205ENST00000474256 IFIT1P09914 478 aaKnown RBP19.74■□□□□ 0.75
CDPF1-205ENST00000474256 PRKG1Q13976 671 aa19.74■□□□□ 0.75
CDPF1-205ENST00000474256 GRIK5Q16478 980 aa19.74■□□□□ 0.75
CDPF1-205ENST00000474256 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
CDPF1-205ENST00000474256 INTS3Q68E01 1043 aaKnown RBP19.74■□□□□ 0.75
CDPF1-205ENST00000474256 TBC1D22AQ8WUA7 517 aa19.74■□□□□ 0.75
CDPF1-205ENST00000474256 VEZTQ9HBM0 779 aa19.74■□□□□ 0.75
CDPF1-205ENST00000474256 HDAC5Q9UQL6 1122 aa19.74■□□□□ 0.75
CDPF1-205ENST00000474256 CIAO1O76071 339 aa19.73■□□□□ 0.75
CDPF1-205ENST00000474256 SPDYE2Q495Y8 402 aa19.73■□□□□ 0.75
CDPF1-205ENST00000474256 LPIN2Q92539 896 aa19.73■□□□□ 0.75
CDPF1-205ENST00000474256 MEIS3Q99687 375 aa19.73■□□□□ 0.75
CDPF1-205ENST00000474256 ANGEL1Q9UNK9 670 aaKnown RBP19.73■□□□□ 0.75
CDPF1-205ENST00000474256 LRRFIP2Q9Y608 721 aaKnown RBP19.73■□□□□ 0.75
CDPF1-205ENST00000474256 SSC5DA1L4H1 1573 aa19.72■□□□□ 0.75
CDPF1-205ENST00000474256 FRAT2O75474 233 aaPredicted RBP19.72■□□□□ 0.75
CDPF1-205ENST00000474256 CRKP46108 304 aa19.72■□□□□ 0.75
CDPF1-205ENST00000474256 HDLBPQ00341 1268 aaKnown RBP19.72■□□□□ 0.75
CDPF1-205ENST00000474256 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
CDPF1-205ENST00000474256 SUPT20HL1Q3ZLR7 823 aa19.72■□□□□ 0.75
CDPF1-205ENST00000474256 DZIP1LQ8IYY4 767 aaKnown RBP19.72■□□□□ 0.75
CDPF1-205ENST00000474256 MIER1Q8N108 512 aa19.72■□□□□ 0.75
CDPF1-205ENST00000474256 ZNF70Q9UC06 446 aaPredicted RBP19.72■□□□□ 0.75
CDPF1-205ENST00000474256 FZD1Q9UP38 647 aa19.72■□□□□ 0.75
CDPF1-205ENST00000474256 SLC5A1P13866 664 aa19.71■□□□□ 0.75
CDPF1-205ENST00000474256 TM4SF4P48230 202 aa19.71■□□□□ 0.75
CDPF1-205ENST00000474256 RASA3Q14644 834 aa19.71■□□□□ 0.75
CDPF1-205ENST00000474256 NBPF12Q5TAG4 269 aaPredicted RBP19.71■□□□□ 0.75
CDPF1-205ENST00000474256 MRIQ9BWK5 157 aa19.71■□□□□ 0.75
CDPF1-205ENST00000474256 TDRD3Q9H7E2 651 aaKnown RBP19.71■□□□□ 0.75
CDPF1-205ENST00000474256 UNCXA6NJT0 531 aa19.7■□□□□ 0.74
CDPF1-205ENST00000474256 PPP1R12BO60237 982 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms