RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 POM121Q96HA1 1249 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 POP1Q99575 1024 aaKnown RBP5.15□□□□□ -1.59
CCDC39-203ENST00000473854 TMPRSS13Q9BYE2 586 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 ZMYND15Q9H091 742 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 VRTNQ9H8Y1 702 aa5.15□□□□□ -1.59
CCDC39-203ENST00000473854 FLIIQ13045 1269 aa5.14□□□□□ -1.59
CCDC39-203ENST00000473854 ATG4DQ86TL0 474 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-203ENST00000473854 ETFBKMTQ8IXQ9 262 aa5.14□□□□□ -1.59
CCDC39-203ENST00000473854 TMEM40Q8WWA1 233 aa5.14□□□□□ -1.59
CCDC39-203ENST00000473854 SLC7A3Q8WY07 619 aa5.14□□□□□ -1.59
CCDC39-203ENST00000473854 MISP3Q96FF7 219 aa5.14□□□□□ -1.59
CCDC39-203ENST00000473854 PRKAG2Q9UGJ0 569 aa5.14□□□□□ -1.59
CCDC39-203ENST00000473854 MAP7Q14244 749 aa5.13□□□□□ -1.59
CCDC39-203ENST00000473854 ZNF792Q3KQV3 632 aa5.13□□□□□ -1.59
CCDC39-203ENST00000473854 PDE12Q6L8Q7 609 aaKnown RBP5.13□□□□□ -1.59
CCDC39-203ENST00000473854 C16orf46Q6P387 395 aa5.13□□□□□ -1.59
CCDC39-203ENST00000473854 EZH1Q92800 747 aaPredicted RBP5.13□□□□□ -1.59
CCDC39-203ENST00000473854 COL26A1Q96A83 441 aa5.13□□□□□ -1.59
CCDC39-203ENST00000473854 RPLP1P05386 114 aaKnown RBP5.12□□□□□ -1.59
CCDC39-203ENST00000473854 HP1BP3Q5SSJ5 553 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-203ENST00000473854 KANK4Q5T7N3 995 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-203ENST00000473854 FAM200AQ8TCP9 573 aa5.12□□□□□ -1.59
CCDC39-203ENST00000473854 FBLIM1Q8WUP2 373 aa5.12□□□□□ -1.59
CCDC39-203ENST00000473854 FAM168AQ92567 244 aa5.12□□□□□ -1.59
CCDC39-203ENST00000473854 GLMNQ92990 594 aa5.12□□□□□ -1.59
CCDC39-203ENST00000473854 TOX2Q96NM4 488 aa5.12□□□□□ -1.59
CCDC39-203ENST00000473854 SOX17Q9H6I2 414 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-203ENST00000473854 ZC3H7BQ9UGR2 993 aaKnown RBP5.12□□□□□ -1.59
CCDC39-203ENST00000473854 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-203ENST00000473854 PDE2AO00408 941 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-203ENST00000473854 EXOSC6Q5RKV6 272 aaKnown RBP5.11□□□□□ -1.59
CCDC39-203ENST00000473854 ADAMTSL4Q6UY14 1074 aa5.11□□□□□ -1.59
CCDC39-203ENST00000473854 FAM84AQ96KN4 292 aa5.11□□□□□ -1.59
CCDC39-203ENST00000473854 ARXQ96QS3 562 aa5.11□□□□□ -1.59
CCDC39-203ENST00000473854 USP26Q9BXU7 913 aa5.11□□□□□ -1.59
CCDC39-203ENST00000473854 LRRC4CQ9HCJ2 640 aa5.11□□□□□ -1.59
CCDC39-203ENST00000473854 SOX13Q9UN79 622 aa5.11□□□□□ -1.59
CCDC39-203ENST00000473854 LOC100289279A0A1B0GTE1 492 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 ADMP35318 185 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 ZAP70P43403 619 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 FKBP5Q13451 457 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-203ENST00000473854 IKBKEQ14164 716 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 CARMIL2Q6F5E8 1435 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 CDPF1Q6NVV7 123 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 ABTB2Q8N961 1025 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 C2CD4AQ8NCU7 369 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-203ENST00000473854 ZSCAN18Q8TBC5 510 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-203ENST00000473854 BCL7CQ8WUZ0 217 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-203ENST00000473854 PMEPA1Q969W9 287 aa5.1□□□□□ -1.59
CCDC39-203ENST00000473854 FAM170BA6NMN3 283 aa5.09□□□□□ -1.59
CCDC39-203ENST00000473854 SOX4Q06945 474 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-203ENST00000473854 SWI5Q1ZZU3 235 aa5.09□□□□□ -1.59
CCDC39-203ENST00000473854 BSNDQ8WZ55 320 aa5.09□□□□□ -1.59
CCDC39-203ENST00000473854 PPP1R12CQ9BZL4 782 aa5.09□□□□□ -1.59
CCDC39-203ENST00000473854 ELP3Q9H9T3 547 aa5.09□□□□□ -1.59
CCDC39-203ENST00000473854 ZFYVE1Q9HBF4 777 aa5.09□□□□□ -1.59
CCDC39-203ENST00000473854 FAM53CQ9NYF3 392 aa5.09□□□□□ -1.59
CCDC39-203ENST00000473854 CYP2E1P05181 493 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-203ENST00000473854 TMEM132AQ24JP5 1023 aa5.08□□□□□ -1.6
CCDC39-203ENST00000473854 LILRA6Q6PI73 481 aa5.08□□□□□ -1.6
CCDC39-203ENST00000473854 ZNF438Q7Z4V0 828 aa5.08□□□□□ -1.6
CCDC39-203ENST00000473854 TMEM102Q8N9M5 508 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-203ENST00000473854 GATA6Q92908 595 aa5.08□□□□□ -1.6
CCDC39-203ENST00000473854 PPP1R16BQ96T49 567 aa5.08□□□□□ -1.6
CCDC39-203ENST00000473854 RC3H2Q9HBD1 1191 aaKnown RBP5.08□□□□□ -1.6
CCDC39-203ENST00000473854 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
CCDC39-203ENST00000473854 SALL4Q9UJQ4 1053 aa5.08□□□□□ -1.6
CCDC39-203ENST00000473854 NCANO14594 1321 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-203ENST00000473854 FUT4P22083 530 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 CES1P23141 567 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 CYP27C1Q4G0S4 372 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 ZNF765Q7L2R6 523 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 SHISA5Q8N114 240 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 GLIS3Q8NEA6 775 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 GPR152Q8TDT2 470 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 RAPGEFL1Q9UHV5 662 aa5.07□□□□□ -1.6
CCDC39-203ENST00000473854 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 NFKBIEO00221 500 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 SOX1O00570 391 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-203ENST00000473854 PRRG2O14669 202 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 ADH5P11766 374 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 DRD2P14416 443 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 PCSK2P16519 638 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 LMOD1P29536 600 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-203ENST00000473854 RAP1GAPP47736 663 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 SIAH1Q8IUQ4 282 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 STIM2Q9P246 746 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 KANSL3Q9P2N6 904 aa5.06□□□□□ -1.6
CCDC39-203ENST00000473854 B8ZZF3 427 aa5.05□□□□□ -1.6
CCDC39-203ENST00000473854 TNFRSF10BO14763 440 aa5.05□□□□□ -1.6
CCDC39-203ENST00000473854 TTC16Q8NEE8 873 aa5.05□□□□□ -1.6
CCDC39-203ENST00000473854 CALR3Q96L12 384 aaKnown RBP5.05□□□□□ -1.6
CCDC39-203ENST00000473854 SAP130Q9H0E3 1048 aa5.05□□□□□ -1.6
CCDC39-203ENST00000473854 ACIN1Q9UKV3 1341 aaKnown RBP5.04□□□□□ -1.6
CCDC39-203ENST00000473854 LRRC10BA6NIK2 292 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 TSPAN15O95858 294 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 NFICP08651 508 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 ZNF865P0CJ78 1059 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-203ENST00000473854 RAB6AP20340 208 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms