RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 MKRN3Q13064 507 aaKnown RBP15.07■□□□□ 0
SMPD4-217ENST00000473720 DLGAP5Q15398 846 aa15.07■□□□□ 0
SMPD4-217ENST00000473720 RASAL3Q86YV0 1011 aa15.07■□□□□ 0
SMPD4-217ENST00000473720 CERS5Q8N5B7 392 aa15.07■□□□□ 0
SMPD4-217ENST00000473720 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
SMPD4-217ENST00000473720 BICC1Q9H694 974 aaKnown RBP15.07■□□□□ 0
SMPD4-217ENST00000473720 IRS2Q9Y4H2 1338 aa15.07■□□□□ 0
SMPD4-217ENST00000473720 GYG1P46976 350 aa15.06■□□□□ 0
SMPD4-217ENST00000473720 DGKZQ13574 1117 aa15.06■□□□□ 0
SMPD4-217ENST00000473720 APOBEC3FQ8IUX4 373 aaKnown RBP15.06■□□□□ 0
SMPD4-217ENST00000473720 SSH1Q8WYL5 1049 aa15.06■□□□□ 0
SMPD4-217ENST00000473720 KAZALD1Q96I82 304 aa15.06■□□□□ 0
SMPD4-217ENST00000473720 OTOFQ9HC10 1997 aa15.05■□□□□ 0
SMPD4-217ENST00000473720 CLRN2A0PK11 232 aa15.05■□□□□ -0
SMPD4-217ENST00000473720 IL1R1P14778 569 aa15.05■□□□□ -0
SMPD4-217ENST00000473720 FKBP1BP68106 108 aa15.05■□□□□ -0
SMPD4-217ENST00000473720 SLFN5Q08AF3 891 aa15.05■□□□□ -0
SMPD4-217ENST00000473720 C15orf52Q6ZUT6 534 aaKnown RBP15.05■□□□□ -0
SMPD4-217ENST00000473720 CSRNP1Q96S65 589 aa15.05■□□□□ -0
SMPD4-217ENST00000473720 RNF186Q9NXI6 227 aa15.05■□□□□ -0
SMPD4-217ENST00000473720 FZD1Q9UP38 647 aa15.05■□□□□ -0
SMPD4-217ENST00000473720 PTPRCP08575 1304 aa15.04■□□□□ -0
SMPD4-217ENST00000473720 CFAP100Q494V2 611 aa15.04■□□□□ -0
SMPD4-217ENST00000473720 MCOLN1Q9GZU1 580 aa15.04■□□□□ -0
SMPD4-217ENST00000473720 VEZTQ9HBM0 779 aa15.04■□□□□ -0
SMPD4-217ENST00000473720 IQSEC3Q9UPP2 1182 aaPredicted RBP15.04■□□□□ -0
SMPD4-217ENST00000473720 MYO1BO43795 1136 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 MMP14P50281 582 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 UBE4AQ14139 1066 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 LRRC24Q50LG9 513 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 METTL24Q5JXM2 366 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 ARMC9Q7Z3E5 817 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 VPS37DQ86XT2 251 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 KLHDC4Q8TBB5 520 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 SMC4Q9NTJ3 1288 aa15.03■□□□□ -0
SMPD4-217ENST00000473720 ANGEL1Q9UNK9 670 aaKnown RBP15.03■□□□□ -0
SMPD4-217ENST00000473720 UTYO14607 1347 aa15.02■□□□□ -0
SMPD4-217ENST00000473720 FRAT2O75474 233 aaPredicted RBP15.02■□□□□ -0
SMPD4-217ENST00000473720 HIBADHP31937 336 aaKnown RBP15.02■□□□□ -0
SMPD4-217ENST00000473720 CHAF1AQ13111 956 aaPredicted RBP15.02■□□□□ -0
SMPD4-217ENST00000473720 MFSD14BQ5SR56 506 aa15.02■□□□□ -0
SMPD4-217ENST00000473720 ZBED3Q96IU2 234 aaPredicted RBP15.02■□□□□ -0
SMPD4-217ENST00000473720 DEFB129Q9H1M3 183 aa15.02■□□□□ -0
SMPD4-217ENST00000473720 SAGE1Q9NXZ1 904 aa15.02■□□□□ -0
SMPD4-217ENST00000473720 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
SMPD4-217ENST00000473720 PTPN12Q05209 780 aaKnown RBP15.01□□□□□ -0.01
SMPD4-217ENST00000473720 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
SMPD4-217ENST00000473720 FAM84BQ96KN1 310 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-217ENST00000473720 PRMT6Q96LA8 375 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-217ENST00000473720 TTF2Q9UNY4 1162 aaKnown RBP15.01□□□□□ -0.01
SMPD4-217ENST00000473720 RIPOR2Q9Y4F9 1068 aa15.01□□□□□ -0.01
SMPD4-217ENST00000473720 LAMB1P07942 1786 aa15.01□□□□□ -0.01
SMPD4-217ENST00000473720 AOX1Q06278 1338 aa15□□□□□ -0.01
SMPD4-217ENST00000473720 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
SMPD4-217ENST00000473720 SPDYE6P0CI01 402 aa15□□□□□ -0.01
SMPD4-217ENST00000473720 RABL6Q3YEC7 729 aaPredicted RBP15□□□□□ -0.01
SMPD4-217ENST00000473720 TDRD7Q8NHU6 1098 aaKnown RBP15□□□□□ -0.01
SMPD4-217ENST00000473720 USP44Q9H0E7 712 aa15□□□□□ -0.01
SMPD4-217ENST00000473720 COL1A1P02452 1464 aaPredicted RBP15□□□□□ -0.01
SMPD4-217ENST00000473720 MYH2Q9UKX2 1941 aa15□□□□□ -0.01
SMPD4-217ENST00000473720 TBC1D8O95759 1140 aa14.99□□□□□ -0.01
SMPD4-217ENST00000473720 FKBP1AP62942 108 aaKnown RBP14.99□□□□□ -0.01
SMPD4-217ENST00000473720 MTMR14Q8NCE2 650 aa14.99□□□□□ -0.01
SMPD4-217ENST00000473720 FAM205AQ6ZU69 1335 aa14.98□□□□□ -0.01
SMPD4-217ENST00000473720 ALDH1L2Q3SY69 923 aa14.98□□□□□ -0.01
SMPD4-217ENST00000473720 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
SMPD4-217ENST00000473720 NBPF12Q5TAG4 269 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-217ENST00000473720 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-217ENST00000473720 TDRD3Q9H7E2 651 aaKnown RBP14.98□□□□□ -0.01
SMPD4-217ENST00000473720 NOB1Q9ULX3 412 aaKnown RBP14.98□□□□□ -0.01
SMPD4-217ENST00000473720 SSC5DA1L4H1 1573 aa14.98□□□□□ -0.01
SMPD4-217ENST00000473720 PDE8BO95263 885 aa14.97□□□□□ -0.01
SMPD4-217ENST00000473720 BCAMP50895 628 aa14.97□□□□□ -0.01
SMPD4-217ENST00000473720 SLC10A4Q96EP9 437 aa14.97□□□□□ -0.01
SMPD4-217ENST00000473720 CLMNQ96JQ2 1002 aa14.97□□□□□ -0.01
SMPD4-217ENST00000473720 TCP10L2B9ZVM9 353 aa14.96□□□□□ -0.01
SMPD4-217ENST00000473720 PPP1R12BO60237 982 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-217ENST00000473720 RASA3Q14644 834 aa14.96□□□□□ -0.01
SMPD4-217ENST00000473720 GRIK5Q16478 980 aa14.96□□□□□ -0.01
SMPD4-217ENST00000473720 SUPT20HL1Q3ZLR7 823 aa14.96□□□□□ -0.01
SMPD4-217ENST00000473720 FBXO33Q7Z6M2 555 aa14.96□□□□□ -0.01
SMPD4-217ENST00000473720 SIL1Q9H173 461 aa14.96□□□□□ -0.01
SMPD4-217ENST00000473720 ZNF70Q9UC06 446 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-217ENST00000473720 PPP2R3BQ9Y5P8 575 aa14.96□□□□□ -0.01
SMPD4-217ENST00000473720 IFIT1P09914 478 aaKnown RBP14.95□□□□□ -0.02
SMPD4-217ENST00000473720 UBTFL1P0CB47 393 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-217ENST00000473720 CRKP46108 304 aa14.95□□□□□ -0.02
SMPD4-217ENST00000473720 SREBF2Q12772 1141 aa14.95□□□□□ -0.02
SMPD4-217ENST00000473720 LDLRAD1Q5T700 205 aa14.95□□□□□ -0.02
SMPD4-217ENST00000473720 SPRYD7Q5W111 196 aa14.95□□□□□ -0.02
SMPD4-217ENST00000473720 DZIP1LQ8IYY4 767 aaKnown RBP14.95□□□□□ -0.02
SMPD4-217ENST00000473720 VGLL2Q8N8G2 317 aa14.95□□□□□ -0.02
SMPD4-217ENST00000473720 SERPINA10Q9UK55 444 aa14.95□□□□□ -0.02
SMPD4-217ENST00000473720 IREB2P48200 963 aaKnown RBP14.94□□□□□ -0.02
SMPD4-217ENST00000473720 TM4SF4P48230 202 aa14.94□□□□□ -0.02
SMPD4-217ENST00000473720 TNFAIP1Q13829 316 aa14.94□□□□□ -0.02
SMPD4-217ENST00000473720 PUM3Q15397 648 aaKnown RBP14.94□□□□□ -0.02
SMPD4-217ENST00000473720 TRMT2AQ8IZ69 625 aaKnown RBP14.94□□□□□ -0.02
SMPD4-217ENST00000473720 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
SMPD4-217ENST00000473720 EYA2O00167 538 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms