RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 DPF2Q92785 391 aa23.3■■□□□ 1.32
CTDSP1-207ENST00000473420 ZNF512BQ96KM6 892 aaPredicted RBP23.3■■□□□ 1.32
CTDSP1-207ENST00000473420 CCDC8Q9H0W5 538 aaPredicted RBP23.3■■□□□ 1.32
CTDSP1-207ENST00000473420 AKAP11Q9UKA4 1901 aa23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 IFIT2P09913 472 aaKnown RBP23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 UQCRFS1P1P0C7P4 283 aa23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 GMPSP49915 693 aaPredicted RBP23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 FBXW7Q969H0 707 aa23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 GPBP1L1Q9HC44 474 aaPredicted RBP23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 TLR7Q9NYK1 1049 aaKnown RBP23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 DENND2AQ9ULE3 1009 aa23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 IQSEC3Q9UPP2 1182 aaPredicted RBP23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 COL1A1P02452 1464 aaPredicted RBP23.29■■□□□ 1.32
CTDSP1-207ENST00000473420 IQCA1LA6NCM1 817 aa23.28■■□□□ 1.32
CTDSP1-207ENST00000473420 SCNN1DP51172 638 aa23.28■■□□□ 1.32
CTDSP1-207ENST00000473420 ZNF784Q8NCA9 323 aaPredicted RBP23.28■■□□□ 1.32
CTDSP1-207ENST00000473420 ZNF526Q8TF50 670 aaPredicted RBP23.28■■□□□ 1.32
CTDSP1-207ENST00000473420 TBC1D22AQ8WUA7 517 aa23.28■■□□□ 1.32
CTDSP1-207ENST00000473420 GMLQ99445 158 aa23.28■■□□□ 1.32
CTDSP1-207ENST00000473420 SMARCA5O60264 1052 aaPredicted RBP23.27■■□□□ 1.32
CTDSP1-207ENST00000473420 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
CTDSP1-207ENST00000473420 MMP14P50281 582 aa23.27■■□□□ 1.32
CTDSP1-207ENST00000473420 TTC39AQ5SRH9 613 aa23.27■■□□□ 1.32
CTDSP1-207ENST00000473420 ERICH6BQ5W0A0 696 aa23.27■■□□□ 1.32
CTDSP1-207ENST00000473420 GPRC5DQ9NZD1 345 aa23.27■■□□□ 1.32
CTDSP1-207ENST00000473420 ZBTB12Q9Y330 459 aaPredicted RBP23.27■■□□□ 1.32
CTDSP1-207ENST00000473420 POTECB2RU33 542 aa23.26■■□□□ 1.31
CTDSP1-207ENST00000473420 RASGRF1Q13972 1273 aa23.26■■□□□ 1.31
CTDSP1-207ENST00000473420 WDR66Q8TBY9 1149 aa23.26■■□□□ 1.31
CTDSP1-207ENST00000473420 ZBTB47Q9UFB7 747 aaPredicted RBP23.26■■□□□ 1.31
CTDSP1-207ENST00000473420 HACL1Q9UJ83 578 aa23.26■■□□□ 1.31
CTDSP1-207ENST00000473420 VEGFAP15692 232 aaPredicted RBP23.25■■□□□ 1.31
CTDSP1-207ENST00000473420 CHAF1AQ13111 956 aaPredicted RBP23.25■■□□□ 1.31
CTDSP1-207ENST00000473420 MFSD14BQ5SR56 506 aa23.25■■□□□ 1.31
CTDSP1-207ENST00000473420 RRAGCQ9HB90 399 aa23.25■■□□□ 1.31
CTDSP1-207ENST00000473420 NMRK2Q9NPI5 230 aa23.25■■□□□ 1.31
CTDSP1-207ENST00000473420 SALL1Q9NSC2 1324 aa23.25■■□□□ 1.31
CTDSP1-207ENST00000473420 ANKRD45Q5TZF3 282 aa23.24■■□□□ 1.31
CTDSP1-207ENST00000473420 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
CTDSP1-207ENST00000473420 CNOT7Q9UIV1 285 aaKnown RBP23.24■■□□□ 1.31
CTDSP1-207ENST00000473420 SUGT1Q9Y2Z0 365 aa23.24■■□□□ 1.31
CTDSP1-207ENST00000473420 MCAMP43121 646 aa23.23■■□□□ 1.31
CTDSP1-207ENST00000473420 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
CTDSP1-207ENST00000473420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.23■■□□□ 1.31
CTDSP1-207ENST00000473420 MXD3Q9BW11 206 aa23.23■■□□□ 1.31
CTDSP1-207ENST00000473420 HMG20BQ9P0W2 317 aa23.23■■□□□ 1.31
CTDSP1-207ENST00000473420 JAG2Q9Y219 1238 aa23.23■■□□□ 1.31
CTDSP1-207ENST00000473420 H7C1D1 291 aa23.22■■□□□ 1.31
CTDSP1-207ENST00000473420 USP17L8P0C7I0 530 aa23.22■■□□□ 1.31
CTDSP1-207ENST00000473420 ZNF280AP59817 542 aaPredicted RBP23.22■■□□□ 1.31
CTDSP1-207ENST00000473420 MICALL2Q8IY33 904 aa23.22■■□□□ 1.31
CTDSP1-207ENST00000473420 ZGPATQ8N5A5 531 aaKnown RBP23.22■■□□□ 1.31
CTDSP1-207ENST00000473420 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
CTDSP1-207ENST00000473420 EPHX2P34913 555 aa23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 EPS15P42566 896 aa23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 NUCB1Q02818 461 aa23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 SCARF1Q14162 830 aa23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 TAF1DQ9H5J8 278 aaPredicted RBP23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 ADARB2Q9NS39 739 aaKnown RBP23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 HDAC9Q9UKV0 1011 aa23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 DOCK2Q92608 1830 aa23.21■■□□□ 1.31
CTDSP1-207ENST00000473420 MAST2Q6P0Q8 1798 aa23.2■■□□□ 1.3
CTDSP1-207ENST00000473420 PNMA8AQ86V59 439 aaPredicted RBP23.2■■□□□ 1.3
CTDSP1-207ENST00000473420 OGFOD1Q8N543 542 aa23.2■■□□□ 1.3
CTDSP1-207ENST00000473420 GPATCH3Q96I76 525 aa23.2■■□□□ 1.3
CTDSP1-207ENST00000473420 BCL11AQ9H165 835 aa23.2■■□□□ 1.3
CTDSP1-207ENST00000473420 ECM29Q5VYK3 1845 aa23.19■■□□□ 1.3
CTDSP1-207ENST00000473420 MAST3O60307 1309 aa23.19■■□□□ 1.3
CTDSP1-207ENST00000473420 ATP5JP18859 108 aa23.19■■□□□ 1.3
CTDSP1-207ENST00000473420 USP50Q70EL3 339 aaPredicted RBP23.19■■□□□ 1.3
CTDSP1-207ENST00000473420 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
CTDSP1-207ENST00000473420 KIAA0825Q8IV33 1275 aa23.19■■□□□ 1.3
CTDSP1-207ENST00000473420 TTC41PQ6P2S7 1318 aa23.18■■□□□ 1.3
CTDSP1-207ENST00000473420 SALL3Q9BXA9 1300 aa23.18■■□□□ 1.3
CTDSP1-207ENST00000473420 KIF3CO14782 793 aa23.18■■□□□ 1.3
CTDSP1-207ENST00000473420 IGSF3O75054 1194 aa23.18■■□□□ 1.3
CTDSP1-207ENST00000473420 B4GALNT3Q6L9W6 998 aa23.18■■□□□ 1.3
CTDSP1-207ENST00000473420 PI16Q6UXB8 463 aa23.18■■□□□ 1.3
CTDSP1-207ENST00000473420 ECHDC1Q9NTX5 307 aa23.18■■□□□ 1.3
CTDSP1-207ENST00000473420 MYO5AQ9Y4I1 1855 aaKnown RBP23.17■■□□□ 1.3
CTDSP1-207ENST00000473420 SHTN1A0MZ66 631 aa23.17■■□□□ 1.3
CTDSP1-207ENST00000473420 SPTY2D1Q68D10 685 aaPredicted RBP23.17■■□□□ 1.3
CTDSP1-207ENST00000473420 MYOZ2Q9NPC6 264 aa23.17■■□□□ 1.3
CTDSP1-207ENST00000473420 TTF2Q9UNY4 1162 aaKnown RBP23.17■■□□□ 1.3
CTDSP1-207ENST00000473420 LDHBP07195 334 aaKnown RBP23.16■■□□□ 1.3
CTDSP1-207ENST00000473420 ZAP70P43403 619 aa23.16■■□□□ 1.3
CTDSP1-207ENST00000473420 HDLBPQ00341 1268 aaKnown RBP23.16■■□□□ 1.3
CTDSP1-207ENST00000473420 CENPQQ7L2Z9 268 aaPredicted RBP23.16■■□□□ 1.3
CTDSP1-207ENST00000473420 C16orf71Q8IYS4 520 aaPredicted RBP23.16■■□□□ 1.3
CTDSP1-207ENST00000473420 MRIQ9BWK5 157 aa23.16■■□□□ 1.3
CTDSP1-207ENST00000473420 LNPKQ9C0E8 428 aa23.16■■□□□ 1.3
CTDSP1-207ENST00000473420 F8W031 263 aaPredicted RBP23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 MX1P20591 662 aa23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 PRDX5P30044 214 aa23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 GRIK5Q16478 980 aa23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 KIF4BQ2VIQ3 1234 aa23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 MTMR14Q8NCE2 650 aa23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 SNRKQ9NRH2 765 aa23.15■■□□□ 1.3
CTDSP1-207ENST00000473420 SERPINA10Q9UK55 444 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms