RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 WNT10BO00744 389 aa28.16■■■□□ 2.1
PTP4A1-203ENST00000473334 SASH1O94885 1247 aa28.16■■■□□ 2.1
PTP4A1-203ENST00000473334 CYP4F22Q6NT55 531 aa28.16■■■□□ 2.1
PTP4A1-203ENST00000473334 HHIPL1Q96JK4 782 aa28.16■■■□□ 2.1
PTP4A1-203ENST00000473334 CAPNS2Q96L46 248 aa28.16■■■□□ 2.1
PTP4A1-203ENST00000473334 FAM205AQ6ZU69 1335 aa28.16■■■□□ 2.1
PTP4A1-203ENST00000473334 ARAP2Q8WZ64 1704 aa28.15■■■□□ 2.1
PTP4A1-203ENST00000473334 ZKSCAN2Q63HK3 967 aa28.15■■■□□ 2.1
PTP4A1-203ENST00000473334 FBXO3Q9UK99 471 aa28.15■■■□□ 2.1
PTP4A1-203ENST00000473334 JAG2Q9Y219 1238 aa28.15■■■□□ 2.1
PTP4A1-203ENST00000473334 CLUAP1Q96AJ1 413 aa28.14■■■□□ 2.1
PTP4A1-203ENST00000473334 CDCA5Q96FF9 252 aa28.14■■■□□ 2.1
PTP4A1-203ENST00000473334 PUM3Q15397 648 aaKnown RBP28.13■■■□□ 2.09
PTP4A1-203ENST00000473334 CAVIN4Q5BKX8 364 aa28.13■■■□□ 2.09
PTP4A1-203ENST00000473334 FBXO33Q7Z6M2 555 aa28.13■■■□□ 2.09
PTP4A1-203ENST00000473334 VPS37DQ86XT2 251 aa28.13■■■□□ 2.09
PTP4A1-203ENST00000473334 GBA2Q9HCG7 927 aaPredicted RBP28.13■■■□□ 2.09
PTP4A1-203ENST00000473334 GRM1Q13255 1194 aa28.12■■■□□ 2.09
PTP4A1-203ENST00000473334 ATG9AQ7Z3C6 839 aa28.12■■■□□ 2.09
PTP4A1-203ENST00000473334 C2orf69Q8N8R5 385 aa28.12■■■□□ 2.09
PTP4A1-203ENST00000473334 ZBED3Q96IU2 234 aaPredicted RBP28.12■■■□□ 2.09
PTP4A1-203ENST00000473334 ECM29Q5VYK3 1845 aa28.12■■■□□ 2.09
PTP4A1-203ENST00000473334 CIAO1O76071 339 aa28.11■■■□□ 2.09
PTP4A1-203ENST00000473334 IFIT1P09914 478 aaKnown RBP28.11■■■□□ 2.09
PTP4A1-203ENST00000473334 FGFR2P21802 821 aa28.11■■■□□ 2.09
PTP4A1-203ENST00000473334 SIL1Q9H173 461 aa28.11■■■□□ 2.09
PTP4A1-203ENST00000473334 F8W031 263 aaPredicted RBP28.1■■■□□ 2.09
PTP4A1-203ENST00000473334 HUNKP57058 714 aa28.1■■■□□ 2.09
PTP4A1-203ENST00000473334 DLGAP5Q15398 846 aa28.1■■■□□ 2.09
PTP4A1-203ENST00000473334 MTMR14Q8NCE2 650 aa28.1■■■□□ 2.09
PTP4A1-203ENST00000473334 MFSD14BQ5SR56 506 aa28.09■■■□□ 2.09
PTP4A1-203ENST00000473334 SCAF8Q9UPN6 1271 aaKnown RBP28.09■■■□□ 2.09
PTP4A1-203ENST00000473334 SLC5A1P13866 664 aa28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 MAP2K1Q02750 393 aaPredicted RBP28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 TMEM57Q8N5G2 664 aa28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 LPIN2Q92539 896 aa28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 AIDAQ96BJ3 306 aa28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 COPRSQ9NQ92 184 aa28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 WBP1LQ9NX94 342 aa28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 PA2G4Q9UQ80 394 aaKnown RBP28.08■■■□□ 2.09
PTP4A1-203ENST00000473334 PAPPA2Q9BXP8 1791 aa28.07■■■□□ 2.08
PTP4A1-203ENST00000473334 FRAT2O75474 233 aaPredicted RBP28.07■■■□□ 2.08
PTP4A1-203ENST00000473334 IL15P40933 162 aaPredicted RBP28.07■■■□□ 2.08
PTP4A1-203ENST00000473334 MTX1Q13505 466 aa28.07■■■□□ 2.08
PTP4A1-203ENST00000473334 APOBEC3FQ8IUX4 373 aaKnown RBP28.07■■■□□ 2.08
PTP4A1-203ENST00000473334 CEP126Q9P2H0 1117 aa28.07■■■□□ 2.08
PTP4A1-203ENST00000473334 IQSEC3Q9UPP2 1182 aaPredicted RBP28.07■■■□□ 2.08
PTP4A1-203ENST00000473334 MYH13Q9UKX3 1938 aa28.06■■■□□ 2.08
PTP4A1-203ENST00000473334 FOXN1O15353 648 aa28.06■■■□□ 2.08
PTP4A1-203ENST00000473334 GNAI2P04899 355 aa28.06■■■□□ 2.08
PTP4A1-203ENST00000473334 MAP2K2P36507 400 aa28.06■■■□□ 2.08
PTP4A1-203ENST00000473334 BCAMP50895 628 aa28.06■■■□□ 2.08
PTP4A1-203ENST00000473334 CFAP100Q494V2 611 aa28.06■■■□□ 2.08
PTP4A1-203ENST00000473334 SRGAP3O43295 1099 aa28.05■■■□□ 2.08
PTP4A1-203ENST00000473334 AOC2O75106 756 aa28.05■■■□□ 2.08
PTP4A1-203ENST00000473334 IFFO2Q5TF58 517 aa28.05■■■□□ 2.08
PTP4A1-203ENST00000473334 COL1A1P02452 1464 aaPredicted RBP28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 SPDYE2BA6NHP3 402 aa28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 SPDYE6P0CI01 402 aa28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 CHAF1AQ13111 956 aaPredicted RBP28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 ATP2B3Q16720 1220 aa28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 RGMBQ6NW40 437 aa28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 FTSJ3Q8IY81 847 aaKnown RBP28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 TBC1D22AQ8WUA7 517 aa28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 TTF2Q9UNY4 1162 aaKnown RBP28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 PCDHAC2Q9Y5I4 1007 aa28.04■■■□□ 2.08
PTP4A1-203ENST00000473334 FKBP1BP68106 108 aa28.03■■■□□ 2.08
PTP4A1-203ENST00000473334 PRAMEF18Q5VWM3 479 aa28.03■■■□□ 2.08
PTP4A1-203ENST00000473334 MYO1BO43795 1136 aa28.02■■■□□ 2.08
PTP4A1-203ENST00000473334 RBM5P52756 815 aaKnown RBP eCLIP28.02■■■□□ 2.081e-11■□□□□ 10.8
PTP4A1-203ENST00000473334 COL13A1Q5TAT6 717 aaPredicted RBP28.02■■■□□ 2.08
PTP4A1-203ENST00000473334 DZIP1LQ8IYY4 767 aaKnown RBP28.02■■■□□ 2.08
PTP4A1-203ENST00000473334 SERPINA10Q9UK55 444 aa28.02■■■□□ 2.08
PTP4A1-203ENST00000473334 NF2P35240 595 aa28.01■■■□□ 2.07
PTP4A1-203ENST00000473334 PRMT6Q96LA8 375 aaPredicted RBP28.01■■■□□ 2.07
PTP4A1-203ENST00000473334 CTCFP49711 727 aaPredicted RBP28■■■□□ 2.07
PTP4A1-203ENST00000473334 NOGQ13253 232 aa28■■■□□ 2.07
PTP4A1-203ENST00000473334 ZNF157P51786 506 aaPredicted RBP27.99■■■□□ 2.07
PTP4A1-203ENST00000473334 CCDC102AQ96A19 550 aa27.99■■■□□ 2.07
PTP4A1-203ENST00000473334 CLRN2A0PK11 232 aa27.98■■■□□ 2.07
PTP4A1-203ENST00000473334 RLBP1P12271 317 aa27.98■■■□□ 2.07
PTP4A1-203ENST00000473334 GRIK5Q16478 980 aa27.98■■■□□ 2.07
PTP4A1-203ENST00000473334 ITPRIPQ8IWB1 547 aa27.98■■■□□ 2.07
PTP4A1-203ENST00000473334 BEGAINQ9BUH8 593 aa27.98■■■□□ 2.07
PTP4A1-203ENST00000473334 FAM155AB1AL88 458 aaPredicted RBP27.97■■■□□ 2.07
PTP4A1-203ENST00000473334 DEFB129Q9H1M3 183 aa27.97■■■□□ 2.07
PTP4A1-203ENST00000473334 PPP2R3BQ9Y5P8 575 aa27.97■■■□□ 2.07
PTP4A1-203ENST00000473334 AOX1Q06278 1338 aa27.96■■■□□ 2.07
PTP4A1-203ENST00000473334 PNMA6EA0A0J9YXQ4 647 aa27.96■■■□□ 2.07
PTP4A1-203ENST00000473334 CRKP46108 304 aa27.96■■■□□ 2.07
PTP4A1-203ENST00000473334 VEZTQ9HBM0 779 aa27.96■■■□□ 2.07
PTP4A1-203ENST00000473334 GNL3LQ9NVN8 582 aaKnown RBP27.96■■■□□ 2.07
PTP4A1-203ENST00000473334 SUGT1Q9Y2Z0 365 aa27.96■■■□□ 2.07
PTP4A1-203ENST00000473334 SLC10A3P09131 477 aa27.95■■■□□ 2.06
PTP4A1-203ENST00000473334 HDLBPQ00341 1268 aaKnown RBP27.95■■■□□ 2.06
PTP4A1-203ENST00000473334 TTLL12Q14166 644 aaPredicted RBP27.95■■■□□ 2.06
PTP4A1-203ENST00000473334 MOB2Q70IA6 237 aa27.95■■■□□ 2.06
PTP4A1-203ENST00000473334 WDR66Q8TBY9 1149 aa27.95■■■□□ 2.06
PTP4A1-203ENST00000473334 PRDM10Q9NQV6 1147 aa27.95■■■□□ 2.06
PTP4A1-203ENST00000473334 TFCP2Q12800 502 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms