RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 NF2P35240 595 aa24.23■■□□□ 1.47
COMMD1-208ENST00000472729 FKBP1AP62942 108 aaKnown RBP24.23■■□□□ 1.47
COMMD1-208ENST00000472729 CLUAP1Q96AJ1 413 aa24.23■■□□□ 1.47
COMMD1-208ENST00000472729 FAM84BQ96KN1 310 aaPredicted RBP24.23■■□□□ 1.47
COMMD1-208ENST00000472729 ZBED9Q6R2W3 1325 aa24.23■■□□□ 1.47
COMMD1-208ENST00000472729 SPEF2Q9C093 1822 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 IRS2Q9Y4H2 1338 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 WNT10BO00744 389 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 TRIM27P14373 513 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 DLK2Q6UY11 383 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 FTSJ3Q8IY81 847 aaKnown RBP24.22■■□□□ 1.47
COMMD1-208ENST00000472729 CDCA5Q96FF9 252 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 MEIS3Q99687 375 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 SIL1Q9H173 461 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 FBXO3Q9UK99 471 aa24.22■■□□□ 1.47
COMMD1-208ENST00000472729 SLC5A1P13866 664 aa24.21■■□□□ 1.47
COMMD1-208ENST00000472729 MFSD14BQ5SR56 506 aa24.21■■□□□ 1.47
COMMD1-208ENST00000472729 TDRD7Q8NHU6 1098 aaKnown RBP24.21■■□□□ 1.47
COMMD1-208ENST00000472729 CEP126Q9P2H0 1117 aa24.21■■□□□ 1.47
COMMD1-208ENST00000472729 MAP2K2P36507 400 aa24.2■■□□□ 1.46
COMMD1-208ENST00000472729 PTPN12Q05209 780 aaKnown RBP24.2■■□□□ 1.46
COMMD1-208ENST00000472729 APOBEC3FQ8IUX4 373 aaKnown RBP24.2■■□□□ 1.46
COMMD1-208ENST00000472729 CHAF1AQ13111 956 aaPredicted RBP24.19■■□□□ 1.46
COMMD1-208ENST00000472729 TTLL12Q14166 644 aaPredicted RBP24.19■■□□□ 1.46
COMMD1-208ENST00000472729 LPIN2Q92539 896 aa24.19■■□□□ 1.46
COMMD1-208ENST00000472729 SCN9AQ15858 1988 aa24.18■■□□□ 1.46
COMMD1-208ENST00000472729 CIAO1O76071 339 aa24.18■■□□□ 1.46
COMMD1-208ENST00000472729 GNAI2P04899 355 aa24.18■■□□□ 1.46
COMMD1-208ENST00000472729 IL15P40933 162 aaPredicted RBP24.18■■□□□ 1.46
COMMD1-208ENST00000472729 RFX5P48382 616 aaPredicted RBP24.18■■□□□ 1.46
COMMD1-208ENST00000472729 CTCFP49711 727 aaPredicted RBP24.18■■□□□ 1.46
COMMD1-208ENST00000472729 CERS5Q8N5B7 392 aa24.18■■□□□ 1.46
COMMD1-208ENST00000472729 TBC1D22AQ8WUA7 517 aa24.18■■□□□ 1.46
COMMD1-208ENST00000472729 CCDC102AQ96A19 550 aa24.18■■□□□ 1.46
COMMD1-208ENST00000472729 WBP1LQ9NX94 342 aa24.18■■□□□ 1.46
COMMD1-208ENST00000472729 FAM205AQ6ZU69 1335 aa24.17■■□□□ 1.46
COMMD1-208ENST00000472729 SRGAP3O43295 1099 aa24.17■■□□□ 1.46
COMMD1-208ENST00000472729 ZNF157P51786 506 aaPredicted RBP24.17■■□□□ 1.46
COMMD1-208ENST00000472729 FKBP1BP68106 108 aa24.17■■□□□ 1.46
COMMD1-208ENST00000472729 CFAP100Q494V2 611 aa24.17■■□□□ 1.46
COMMD1-208ENST00000472729 RGMBQ6NW40 437 aa24.17■■□□□ 1.46
COMMD1-208ENST00000472729 FBXO33Q7Z6M2 555 aa24.17■■□□□ 1.46
COMMD1-208ENST00000472729 IQSEC3Q9UPP2 1182 aaPredicted RBP24.17■■□□□ 1.46
COMMD1-208ENST00000472729 BCAMP50895 628 aa24.16■■□□□ 1.46
COMMD1-208ENST00000472729 NOGQ13253 232 aa24.16■■□□□ 1.46
COMMD1-208ENST00000472729 VGLL2Q8N8G2 317 aa24.16■■□□□ 1.46
COMMD1-208ENST00000472729 GNL3LQ9NVN8 582 aaKnown RBP24.16■■□□□ 1.46
COMMD1-208ENST00000472729 TTF2Q9UNY4 1162 aaKnown RBP24.16■■□□□ 1.46
COMMD1-208ENST00000472729 SCAF8Q9UPN6 1271 aaKnown RBP24.16■■□□□ 1.46
COMMD1-208ENST00000472729 AOC2O75106 756 aa24.15■■□□□ 1.46
COMMD1-208ENST00000472729 FOXN1O15353 648 aa24.14■■□□□ 1.45
COMMD1-208ENST00000472729 ATP2B3Q16720 1220 aa24.14■■□□□ 1.45
COMMD1-208ENST00000472729 MTMR14Q8NCE2 650 aa24.14■■□□□ 1.45
COMMD1-208ENST00000472729 VEZTQ9HBM0 779 aa24.14■■□□□ 1.45
COMMD1-208ENST00000472729 COL13A1Q5TAT6 717 aaPredicted RBP24.13■■□□□ 1.45
COMMD1-208ENST00000472729 PRAMEF18Q5VWM3 479 aa24.13■■□□□ 1.45
COMMD1-208ENST00000472729 ATG9AQ7Z3C6 839 aa24.13■■□□□ 1.45
COMMD1-208ENST00000472729 TMEM57Q8N5G2 664 aa24.13■■□□□ 1.45
COMMD1-208ENST00000472729 COPRSQ9NQ92 184 aa24.13■■□□□ 1.45
COMMD1-208ENST00000472729 SERPINA10Q9UK55 444 aa24.13■■□□□ 1.45
COMMD1-208ENST00000472729 SPDYE2BA6NHP3 402 aa24.12■■□□□ 1.45
COMMD1-208ENST00000472729 SPDYE6P0CI01 402 aa24.12■■□□□ 1.45
COMMD1-208ENST00000472729 ITPRIPQ8IWB1 547 aa24.12■■□□□ 1.45
COMMD1-208ENST00000472729 DZIP1LQ8IYY4 767 aaKnown RBP24.12■■□□□ 1.45
COMMD1-208ENST00000472729 TNS4Q8IZW8 715 aa24.12■■□□□ 1.45
COMMD1-208ENST00000472729 PA2G4Q9UQ80 394 aaKnown RBP24.12■■□□□ 1.45
COMMD1-208ENST00000472729 CLRN2A0PK11 232 aa24.11■■□□□ 1.45
COMMD1-208ENST00000472729 FGFR2P21802 821 aa24.11■■□□□ 1.45
COMMD1-208ENST00000472729 ARMC9Q7Z3E5 817 aa24.11■■□□□ 1.45
COMMD1-208ENST00000472729 DEFB129Q9H1M3 183 aa24.11■■□□□ 1.45
COMMD1-208ENST00000472729 AKAP2Q9Y2D5 859 aa24.11■■□□□ 1.45
COMMD1-208ENST00000472729 CA12O43570 354 aa24.1■■□□□ 1.45
COMMD1-208ENST00000472729 TNFAIP1Q13829 316 aa24.1■■□□□ 1.45
COMMD1-208ENST00000472729 IFFO2Q5TF58 517 aa24.1■■□□□ 1.45
COMMD1-208ENST00000472729 WDR66Q8TBY9 1149 aa24.1■■□□□ 1.45
COMMD1-208ENST00000472729 ZBED3Q96IU2 234 aaPredicted RBP24.1■■□□□ 1.45
COMMD1-208ENST00000472729 TNNQ9UQP3 1299 aa24.1■■□□□ 1.45
COMMD1-208ENST00000472729 PPP2R3BQ9Y5P8 575 aa24.1■■□□□ 1.45
COMMD1-208ENST00000472729 MAST3O60307 1309 aa24.1■■□□□ 1.45
COMMD1-208ENST00000472729 MS4A1P11836 297 aa24.09■■□□□ 1.45
COMMD1-208ENST00000472729 G3BP1Q13283 466 aaKnown RBP eCLIP24.09■■□□□ 1.45
COMMD1-208ENST00000472729 SUPT20HL1Q3ZLR7 823 aa24.09■■□□□ 1.45
COMMD1-208ENST00000472729 PRMT6Q96LA8 375 aaPredicted RBP24.09■■□□□ 1.45
COMMD1-208ENST00000472729 PCNTO95613 3336 aa24.09■■□□□ 1.45
COMMD1-208ENST00000472729 CRKP46108 304 aa24.08■■□□□ 1.45
COMMD1-208ENST00000472729 LBX1P52954 281 aa24.08■■□□□ 1.45
COMMD1-208ENST00000472729 MTX1Q13505 466 aa24.08■■□□□ 1.45
COMMD1-208ENST00000472729 TEKT1Q969V4 418 aa24.08■■□□□ 1.45
COMMD1-208ENST00000472729 PRDM10Q9NQV6 1147 aa24.08■■□□□ 1.45
COMMD1-208ENST00000472729 SUGT1Q9Y2Z0 365 aa24.08■■□□□ 1.45
COMMD1-208ENST00000472729 UBE2Q2LH0YL09 131 aa24.07■■□□□ 1.44
COMMD1-208ENST00000472729 PPP1R12BO60237 982 aaPredicted RBP24.07■■□□□ 1.44
COMMD1-208ENST00000472729 PRKG1Q13976 671 aa24.07■■□□□ 1.44
COMMD1-208ENST00000472729 TMOD2Q9NZR1 351 aa24.07■■□□□ 1.44
COMMD1-208ENST00000472729 TNNI2P48788 182 aa24.06■■□□□ 1.44
COMMD1-208ENST00000472729 HDLBPQ00341 1268 aaKnown RBP24.06■■□□□ 1.44
COMMD1-208ENST00000472729 OS9Q13438 667 aaPredicted RBP24.06■■□□□ 1.44
COMMD1-208ENST00000472729 GORABQ5T7V8 394 aa24.06■■□□□ 1.44
COMMD1-208ENST00000472729 PCDHAC2Q9Y5I4 1007 aa24.06■■□□□ 1.44
COMMD1-208ENST00000472729 TRPM7Q96QT4 1865 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms