RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 TRIM17Q9Y577 477 aa12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 IGF2BP3O00425 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCAMP3-205ENST00000472397 CSF1RP07333 972 aa12.89□□□□□ -0.35
SCAMP3-205ENST00000472397 GJA5P36382 358 aa12.89□□□□□ -0.35
SCAMP3-205ENST00000472397 EXOSC9Q06265 439 aaKnown RBP12.89□□□□□ -0.35
SCAMP3-205ENST00000472397 ZBED3Q96IU2 234 aaPredicted RBP12.89□□□□□ -0.35
SCAMP3-205ENST00000472397 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
SCAMP3-205ENST00000472397 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 MYH3P11055 1940 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 MYCP01106 439 aaPredicted RBP12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 FOXO4P98177 505 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 SREBF2Q12772 1141 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 FBXO46Q6PJ61 603 aaPredicted RBP12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 CD99L2Q8TCZ2 262 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 ELP3Q9H9T3 547 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
SCAMP3-205ENST00000472397 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 GYG1P46976 350 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 CAP1Q01518 475 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 PLA2G12BQ9BX93 195 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 IRS2Q9Y4H2 1338 aa12.87□□□□□ -0.35
SCAMP3-205ENST00000472397 VAMP4O75379 141 aa12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 RASA3Q14644 834 aa12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 PKN2Q16513 984 aaKnown RBP12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 PRPF38BQ5VTL8 546 aaKnown RBP12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 LINS1Q8NG48 757 aa12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
SCAMP3-205ENST00000472397 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 TCP10L2B9ZVM9 353 aa12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 CACNB3P54284 484 aa12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 GRIK5Q16478 980 aa12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 OTOP1Q7RTM1 612 aa12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 ZNF804AQ7Z570 1209 aa12.85□□□□□ -0.35
SCAMP3-205ENST00000472397 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 CRHR2Q13324 411 aa12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 PTPN18Q99952 460 aa12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 CHMP4AQ9BY43 222 aa12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
SCAMP3-205ENST00000472397 MYO1BO43795 1136 aa12.83□□□□□ -0.36
SCAMP3-205ENST00000472397 EN2P19622 333 aaPredicted RBP12.83□□□□□ -0.36
SCAMP3-205ENST00000472397 CCDC57Q2TAC2 916 aa12.83□□□□□ -0.36
SCAMP3-205ENST00000472397 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
SCAMP3-205ENST00000472397 ZNF70Q9UC06 446 aaPredicted RBP12.83□□□□□ -0.36
SCAMP3-205ENST00000472397 IL1R1P14778 569 aa12.82□□□□□ -0.36
SCAMP3-205ENST00000472397 SUPT20HL1Q3ZLR7 823 aa12.82□□□□□ -0.36
SCAMP3-205ENST00000472397 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
SCAMP3-205ENST00000472397 TMEM39BQ9GZU3 492 aa12.82□□□□□ -0.36
SCAMP3-205ENST00000472397 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
SCAMP3-205ENST00000472397 IREB2P48200 963 aaKnown RBP12.81□□□□□ -0.36
SCAMP3-205ENST00000472397 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
SCAMP3-205ENST00000472397 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
SCAMP3-205ENST00000472397 MTMR14Q8NCE2 650 aa12.81□□□□□ -0.36
SCAMP3-205ENST00000472397 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
SCAMP3-205ENST00000472397 GRM8O00222 908 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 HIBADHP31937 336 aaKnown RBP12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 CRKP46108 304 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 MAP3K11Q16584 847 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 LRRC24Q50LG9 513 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 EFCC1Q9HA90 598 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 PTPN22Q9Y2R2 807 aa12.8□□□□□ -0.36
SCAMP3-205ENST00000472397 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 ZBTB48P10074 688 aaPredicted RBP12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 C15orf52Q6ZUT6 534 aaKnown RBP12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 DZIP1LQ8IYY4 767 aaKnown RBP12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 ANKRD13AQ8IZ07 590 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 IL16Q14005 1332 aa12.79□□□□□ -0.36
SCAMP3-205ENST00000472397 CCL15-CCL14A0A0B4J2E2 113 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 FRAT2O75474 233 aaPredicted RBP12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 NBPF7P0C2Y1 421 aaPredicted RBP12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 SP3Q02447 781 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms