RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ABHD8Q96I13 439 aa28.39■■■□□ 2.14
C9orf3-213ENST00000471978 JAG2Q9Y219 1238 aa28.39■■■□□ 2.14
C9orf3-213ENST00000471978 F8W031 263 aaPredicted RBP28.38■■■□□ 2.13
C9orf3-213ENST00000471978 UBE2Q2LH0YL09 131 aa28.38■■■□□ 2.13
C9orf3-213ENST00000471978 NF2P35240 595 aa28.38■■■□□ 2.13
C9orf3-213ENST00000471978 TTLL12Q14166 644 aaPredicted RBP28.38■■■□□ 2.13
C9orf3-213ENST00000471978 RABL6Q3YEC7 729 aaPredicted RBP28.38■■■□□ 2.13
C9orf3-213ENST00000471978 FKBP1AP62942 108 aaKnown RBP28.37■■■□□ 2.13
C9orf3-213ENST00000471978 ALDH1L2Q3SY69 923 aa28.37■■■□□ 2.13
C9orf3-213ENST00000471978 ANKRD44Q8N8A2 993 aa28.37■■■□□ 2.13
C9orf3-213ENST00000471978 RIPOR2Q9Y4F9 1068 aa28.37■■■□□ 2.13
C9orf3-213ENST00000471978 MROH5Q6ZUA9 1318 aa28.37■■■□□ 2.13
C9orf3-213ENST00000471978 MTMR14Q8NCE2 650 aa28.36■■■□□ 2.13
C9orf3-213ENST00000471978 CSRNP1Q96S65 589 aa28.36■■■□□ 2.13
C9orf3-213ENST00000471978 SAGE1Q9NXZ1 904 aa28.36■■■□□ 2.13
C9orf3-213ENST00000471978 GYG1P46976 350 aa28.35■■■□□ 2.13
C9orf3-213ENST00000471978 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
C9orf3-213ENST00000471978 USP44Q9H0E7 712 aa28.35■■■□□ 2.13
C9orf3-213ENST00000471978 SMC4Q9NTJ3 1288 aa28.35■■■□□ 2.13
C9orf3-213ENST00000471978 HIBADHP31937 336 aaKnown RBP28.34■■■□□ 2.13
C9orf3-213ENST00000471978 RNF186Q9NXI6 227 aa28.34■■■□□ 2.13
C9orf3-213ENST00000471978 PCDHAC2Q9Y5I4 1007 aa28.34■■■□□ 2.13
C9orf3-213ENST00000471978 CASP8AP2Q9UKL3 1982 aa28.33■■■□□ 2.13
C9orf3-213ENST00000471978 TRPA1O75762 1119 aa28.33■■■□□ 2.13
C9orf3-213ENST00000471978 CFAP100Q494V2 611 aa28.33■■■□□ 2.13
C9orf3-213ENST00000471978 LRRC24Q50LG9 513 aa28.33■■■□□ 2.13
C9orf3-213ENST00000471978 REM2Q8IYK8 340 aaPredicted RBP28.33■■■□□ 2.13
C9orf3-213ENST00000471978 TDRD7Q8NHU6 1098 aaKnown RBP28.33■■■□□ 2.13
C9orf3-213ENST00000471978 FAM84BQ96KN1 310 aaPredicted RBP28.33■■■□□ 2.13
C9orf3-213ENST00000471978 FAM205AQ6ZU69 1335 aa28.33■■■□□ 2.13
C9orf3-213ENST00000471978 CCER2I3L3R5 266 aa28.32■■■□□ 2.12
C9orf3-213ENST00000471978 DEFB129Q9H1M3 183 aa28.32■■■□□ 2.12
C9orf3-213ENST00000471978 SPDYE2BA6NHP3 402 aa28.31■■■□□ 2.12
C9orf3-213ENST00000471978 MYO1BO43795 1136 aa28.31■■■□□ 2.12
C9orf3-213ENST00000471978 SPDYE6P0CI01 402 aa28.31■■■□□ 2.12
C9orf3-213ENST00000471978 PRKG1Q13976 671 aa28.31■■■□□ 2.12
C9orf3-213ENST00000471978 METTL24Q5JXM2 366 aa28.31■■■□□ 2.12
C9orf3-213ENST00000471978 COL1A1P02452 1464 aaPredicted RBP28.3■■■□□ 2.12
C9orf3-213ENST00000471978 RBM5P52756 815 aaKnown RBP eCLIP28.3■■■□□ 2.122e-7■■■■□ 26.1
C9orf3-213ENST00000471978 MFSD14BQ5SR56 506 aa28.3■■■□□ 2.12
C9orf3-213ENST00000471978 ARMC9Q7Z3E5 817 aa28.3■■■□□ 2.12
C9orf3-213ENST00000471978 PRMT6Q96LA8 375 aaPredicted RBP28.3■■■□□ 2.12
C9orf3-213ENST00000471978 CLRN2A0PK11 232 aa28.29■■■□□ 2.12
C9orf3-213ENST00000471978 VPS37DQ86XT2 251 aa28.29■■■□□ 2.12
C9orf3-213ENST00000471978 KLHDC4Q8TBB5 520 aa28.29■■■□□ 2.12
C9orf3-213ENST00000471978 AKAP11Q9UKA4 1901 aa28.29■■■□□ 2.12
C9orf3-213ENST00000471978 CT47B1P0C2W7 299 aaPredicted RBP28.28■■■□□ 2.12
C9orf3-213ENST00000471978 PTPN12Q05209 780 aaKnown RBP28.28■■■□□ 2.12
C9orf3-213ENST00000471978 MCOLN1Q9GZU1 580 aa28.28■■■□□ 2.12
C9orf3-213ENST00000471978 PDE8BO95263 885 aa28.27■■■□□ 2.12
C9orf3-213ENST00000471978 FBXO33Q7Z6M2 555 aa28.27■■■□□ 2.12
C9orf3-213ENST00000471978 VEZTQ9HBM0 779 aa28.27■■■□□ 2.12
C9orf3-213ENST00000471978 TTF2Q9UNY4 1162 aaKnown RBP28.27■■■□□ 2.12
C9orf3-213ENST00000471978 PPP2R3BQ9Y5P8 575 aa28.27■■■□□ 2.12
C9orf3-213ENST00000471978 AOX1Q06278 1338 aa28.26■■■□□ 2.11
C9orf3-213ENST00000471978 CCDC85CA6NKD9 419 aa28.26■■■□□ 2.11
C9orf3-213ENST00000471978 DGKZQ13574 1117 aa28.26■■■□□ 2.11
C9orf3-213ENST00000471978 CAVIN4Q5BKX8 364 aa28.26■■■□□ 2.11
C9orf3-213ENST00000471978 VGLL2Q8N8G2 317 aa28.26■■■□□ 2.11
C9orf3-213ENST00000471978 ANGEL1Q9UNK9 670 aaKnown RBP28.26■■■□□ 2.11
C9orf3-213ENST00000471978 ECM29Q5VYK3 1845 aa28.26■■■□□ 2.11
C9orf3-213ENST00000471978 NOB1Q9ULX3 412 aaKnown RBP28.25■■■□□ 2.11
C9orf3-213ENST00000471978 IQSEC3Q9UPP2 1182 aaPredicted RBP28.25■■■□□ 2.11
C9orf3-213ENST00000471978 MKRN3Q13064 507 aaKnown RBP28.24■■■□□ 2.11
C9orf3-213ENST00000471978 LDLRAD1Q5T700 205 aa28.24■■■□□ 2.11
C9orf3-213ENST00000471978 SERPINA10Q9UK55 444 aa28.24■■■□□ 2.11
C9orf3-213ENST00000471978 FZD1Q9UP38 647 aa28.24■■■□□ 2.11
C9orf3-213ENST00000471978 FRAT2O75474 233 aaPredicted RBP28.23■■■□□ 2.11
C9orf3-213ENST00000471978 RFX5P48382 616 aaPredicted RBP28.22■■■□□ 2.11
C9orf3-213ENST00000471978 CHAF1AQ13111 956 aaPredicted RBP28.22■■■□□ 2.11
C9orf3-213ENST00000471978 SUPT20HL1Q3ZLR7 823 aa28.22■■■□□ 2.11
C9orf3-213ENST00000471978 PPP1R12BO60237 982 aaPredicted RBP28.21■■■□□ 2.11
C9orf3-213ENST00000471978 UBTFL1P0CB47 393 aaPredicted RBP28.21■■■□□ 2.11
C9orf3-213ENST00000471978 PUM3Q15397 648 aaKnown RBP28.21■■■□□ 2.11
C9orf3-213ENST00000471978 API5Q9BZZ5 524 aaKnown RBP28.21■■■□□ 2.11
C9orf3-213ENST00000471978 SSC5DA1L4H1 1573 aa28.2■■■□□ 2.11
C9orf3-213ENST00000471978 EYA2O00167 538 aa28.2■■■□□ 2.1
C9orf3-213ENST00000471978 TM4SF4P48230 202 aa28.2■■■□□ 2.1
C9orf3-213ENST00000471978 BCAMP50895 628 aa28.2■■■□□ 2.1
C9orf3-213ENST00000471978 RASA3Q14644 834 aa28.2■■■□□ 2.1
C9orf3-213ENST00000471978 MAP3K11Q16584 847 aa28.2■■■□□ 2.1
C9orf3-213ENST00000471978 NBPF12Q5TAG4 269 aaPredicted RBP28.2■■■□□ 2.1
C9orf3-213ENST00000471978 ZNF70Q9UC06 446 aaPredicted RBP28.2■■■□□ 2.1
C9orf3-213ENST00000471978 ARAP2Q8WZ64 1704 aa28.2■■■□□ 2.1
C9orf3-213ENST00000471978 IFIT1P09914 478 aaKnown RBP28.19■■■□□ 2.1
C9orf3-213ENST00000471978 CRKP46108 304 aa28.19■■■□□ 2.1
C9orf3-213ENST00000471978 SPDYE2Q495Y8 402 aa28.19■■■□□ 2.1
C9orf3-213ENST00000471978 DZIP1LQ8IYY4 767 aaKnown RBP28.19■■■□□ 2.1
C9orf3-213ENST00000471978 TBC1D22AQ8WUA7 517 aa28.19■■■□□ 2.1
C9orf3-213ENST00000471978 TDRD3Q9H7E2 651 aaKnown RBP28.19■■■□□ 2.1
C9orf3-213ENST00000471978 FGFR2P21802 821 aa28.18■■■□□ 2.1
C9orf3-213ENST00000471978 SREBF2Q12772 1141 aa28.18■■■□□ 2.1
C9orf3-213ENST00000471978 TNFAIP1Q13829 316 aa28.18■■■□□ 2.1
C9orf3-213ENST00000471978 GRIK5Q16478 980 aa28.18■■■□□ 2.1
C9orf3-213ENST00000471978 SPRYD7Q5W111 196 aa28.18■■■□□ 2.1
C9orf3-213ENST00000471978 SLC10A4Q96EP9 437 aa28.18■■■□□ 2.1
C9orf3-213ENST00000471978 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.18■■■□□ 2.1
C9orf3-213ENST00000471978 KIF16BQ96L93 1317 aa28.18■■■□□ 2.1
C9orf3-213ENST00000471978 TBC1D8O95759 1140 aa28.17■■■□□ 2.1
C9orf3-213ENST00000471978 RARSP54136 660 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 1439.8 ms