RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 USP17L3A6NCW0 530 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 USP17L4A6NCW7 530 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 J3QW42 95 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 BIN1O00499 593 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 TPD52L2O43399 206 aaKnown RBP4.59□□□□□ -1.67
SCN3A-207ENST00000471697 ATP9BO43861 1147 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 F13BP05160 661 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 ATP1A2P50993 1020 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 CLDN10P78369 228 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 PHLDB3Q6NSJ2 640 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 USP17L2Q6R6M4 530 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 USP17L1Q7RTZ2 530 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 NPAS4Q8IUM7 802 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 BHLHE22Q8NFJ8 381 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-207ENST00000471697 SBNO2Q9Y2G9 1366 aa4.59□□□□□ -1.67
SCN3A-207ENST00000471697 ATAD2Q6PL18 1390 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 TLDC2A0PJX2 215 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 B8ZZF3 427 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 LINC01387J3KSC0 135 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 RAB11FIP3O75154 756 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 PSAPP07602 524 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 PREPP48147 710 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 DUOXA2Q1HG44 320 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 PLEKHM2Q8IWE5 1019 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 COL26A1Q96A83 441 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 METTL22Q9BUU2 404 aaPredicted RBP4.58□□□□□ -1.68
SCN3A-207ENST00000471697 OSBPL1AQ9BXW6 950 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 METTL14Q9HCE5 456 aaKnown RBP4.58□□□□□ -1.68
SCN3A-207ENST00000471697 MKRN1Q9UHC7 482 aaKnown RBP4.58□□□□□ -1.68
SCN3A-207ENST00000471697 RAPGEFL1Q9UHV5 662 aa4.58□□□□□ -1.68
SCN3A-207ENST00000471697 SOWAHDA6NJG2 315 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 SART1O43290 800 aaKnown RBP4.57□□□□□ -1.68
SCN3A-207ENST00000471697 DKK1O94907 266 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 RECKO95980 971 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 ELOAQ14241 798 aaKnown RBP4.57□□□□□ -1.68
SCN3A-207ENST00000471697 CDCA8Q53HL2 280 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 CCDC181Q5TID7 509 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 KSR1Q8IVT5 923 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 TEX2Q8IWB9 1127 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 LARGE2Q8N3Y3 721 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 FLCNQ8NFG4 579 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 NGLY1Q96IV0 654 aa4.57□□□□□ -1.68
SCN3A-207ENST00000471697 MAFBQ9Y5Q3 323 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-207ENST00000471697 ANKRD33BA6NCL7 494 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 MAP4P27816 1152 aaKnown RBP4.56□□□□□ -1.68
SCN3A-207ENST00000471697 KANK4Q5T7N3 995 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-207ENST00000471697 GORABQ5T7V8 394 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 EGFLAMQ63HQ2 1017 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 SIX5Q8N196 739 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 OGFOD1Q8N543 542 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 TSEN2Q8NCE0 465 aaKnown RBP4.56□□□□□ -1.68
SCN3A-207ENST00000471697 TMEM40Q8WWA1 233 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 LNPKQ9C0E8 428 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 RNF208Q9H0X6 261 aa4.56□□□□□ -1.68
SCN3A-207ENST00000471697 TMA7Q9Y2S6 64 aaKnown RBP4.56□□□□□ -1.68
SCN3A-207ENST00000471697 FSCN2O14926 492 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 MMP20O60882 483 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 ADAM11O75078 769 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 LGR5O75473 907 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 SSFA2P28290 1259 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 IRX6P78412 446 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-207ENST00000471697 HSP90AB4PQ58FF6 505 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 FBXO33Q7Z6M2 555 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 UBASH3BQ8TF42 649 aa4.55□□□□□ -1.68
SCN3A-207ENST00000471697 ZNF594Q96JF6 807 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-207ENST00000471697 NSUN5Q96P11 429 aaKnown RBP4.55□□□□□ -1.68
SCN3A-207ENST00000471697 MICAL2O94851 1124 aa4.54□□□□□ -1.68
SCN3A-207ENST00000471697 ERCC5P28715 1186 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-207ENST00000471697 CDC27P30260 824 aa4.54□□□□□ -1.68
SCN3A-207ENST00000471697 BUD31P41223 144 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-207ENST00000471697 MESP2Q0VG99 397 aa4.54□□□□□ -1.68
SCN3A-207ENST00000471697 CRTC2Q53ET0 693 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-207ENST00000471697 ATG4DQ86TL0 474 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-207ENST00000471697 SIAH1Q8IUQ4 282 aa4.54□□□□□ -1.68
SCN3A-207ENST00000471697 SCG3Q8WXD2 468 aaKnown RBP4.54□□□□□ -1.68
SCN3A-207ENST00000471697 GPATCH3Q96I76 525 aa4.54□□□□□ -1.68
SCN3A-207ENST00000471697 SLC38A3Q99624 504 aa4.54□□□□□ -1.68
SCN3A-207ENST00000471697 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCN3A-207ENST00000471697 RTCBQ9Y3I0 505 aaKnown RBP4.54□□□□□ -1.68
SCN3A-207ENST00000471697 MEGF11A6BM72 1044 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 OPLAHO14841 1288 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 MAFGO15525 162 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 CYP26A1O43174 497 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 XYLBO75191 536 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 RASA1P20936 1047 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 IGBP1P78318 339 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 SETQ01105 290 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-207ENST00000471697 TMEM164Q5U3C3 297 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 TXNDC11Q6PKC3 985 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 FBXL6Q8N531 539 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 PIK3R5Q8WYR1 880 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 WNT8BQ93098 351 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 BRINP2Q9C0B6 783 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 ADAM19Q9H013 955 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 KLK14Q9P0G3 267 aa4.53□□□□□ -1.68
SCN3A-207ENST00000471697 MAGEC2Q9UBF1 373 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-207ENST00000471697 DDX3YO15523 660 aaKnown RBP4.52□□□□□ -1.69
SCN3A-207ENST00000471697 TAGLNQ01995 201 aaKnown RBP4.52□□□□□ -1.69
SCN3A-207ENST00000471697 PTK7Q13308 1070 aa4.52□□□□□ -1.69
SCN3A-207ENST00000471697 PTPROQ16827 1216 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms