RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 BEGAINQ9BUH8 593 aa18.79■□□□□ 0.6
VPS8-221ENST00000471655 HSPA8P11142 646 aaKnown RBP18.78■□□□□ 0.6
VPS8-221ENST00000471655 HIBADHP31937 336 aaKnown RBP18.78■□□□□ 0.6
VPS8-221ENST00000471655 LRRC24Q50LG9 513 aa18.78■□□□□ 0.6
VPS8-221ENST00000471655 FAM84BQ96KN1 310 aaPredicted RBP18.78■□□□□ 0.6
VPS8-221ENST00000471655 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
VPS8-221ENST00000471655 FAM155AB1AL88 458 aaPredicted RBP18.77■□□□□ 0.6
VPS8-221ENST00000471655 CA12O43570 354 aa18.77■□□□□ 0.6
VPS8-221ENST00000471655 PDE8BO95263 885 aa18.77■□□□□ 0.6
VPS8-221ENST00000471655 LBX1P52954 281 aa18.77■□□□□ 0.6
VPS8-221ENST00000471655 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
VPS8-221ENST00000471655 MIER1Q8N108 512 aa18.77■□□□□ 0.6
VPS8-221ENST00000471655 VGLL2Q8N8G2 317 aa18.77■□□□□ 0.6
VPS8-221ENST00000471655 KIF16BQ96L93 1317 aa18.76■□□□□ 0.59
VPS8-221ENST00000471655 UBTFL1P0CB47 393 aaPredicted RBP18.76■□□□□ 0.59
VPS8-221ENST00000471655 RFX5P48382 616 aaPredicted RBP18.76■□□□□ 0.59
VPS8-221ENST00000471655 DLGAP5Q15398 846 aa18.76■□□□□ 0.59
VPS8-221ENST00000471655 METTL24Q5JXM2 366 aa18.76■□□□□ 0.59
VPS8-221ENST00000471655 FBXO33Q7Z6M2 555 aa18.76■□□□□ 0.59
VPS8-221ENST00000471655 APOBEC3FQ8IUX4 373 aaKnown RBP18.76■□□□□ 0.59
VPS8-221ENST00000471655 GYG1P46976 350 aa18.75■□□□□ 0.59
VPS8-221ENST00000471655 ZNF157P51786 506 aaPredicted RBP18.75■□□□□ 0.59
VPS8-221ENST00000471655 FBXO3Q9UK99 471 aa18.75■□□□□ 0.59
VPS8-221ENST00000471655 PAPPA2Q9BXP8 1791 aa18.75■□□□□ 0.59
VPS8-221ENST00000471655 PTPN12Q05209 780 aaKnown RBP18.74■□□□□ 0.59
VPS8-221ENST00000471655 INTS3Q68E01 1043 aaKnown RBP18.74■□□□□ 0.59
VPS8-221ENST00000471655 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
VPS8-221ENST00000471655 COL1A1P02452 1464 aaPredicted RBP18.73■□□□□ 0.59
VPS8-221ENST00000471655 EYA2O00167 538 aa18.73■□□□□ 0.59
VPS8-221ENST00000471655 SLC10A3P09131 477 aa18.73■□□□□ 0.59
VPS8-221ENST00000471655 FGFR2P21802 821 aa18.73■□□□□ 0.59
VPS8-221ENST00000471655 NF2P35240 595 aa18.73■□□□□ 0.59
VPS8-221ENST00000471655 CAVIN4Q5BKX8 364 aa18.73■□□□□ 0.59
VPS8-221ENST00000471655 SPDYE2BA6NHP3 402 aa18.72■□□□□ 0.59
VPS8-221ENST00000471655 IPO8O15397 1037 aaKnown RBP18.72■□□□□ 0.59
VPS8-221ENST00000471655 SPDYE6P0CI01 402 aa18.72■□□□□ 0.59
VPS8-221ENST00000471655 PUM3Q15397 648 aaKnown RBP18.72■□□□□ 0.59
VPS8-221ENST00000471655 CFAP100Q494V2 611 aa18.72■□□□□ 0.59
VPS8-221ENST00000471655 MFSD14BQ5SR56 506 aa18.72■□□□□ 0.59
VPS8-221ENST00000471655 ZIC5Q96T25 663 aa18.72■□□□□ 0.59
VPS8-221ENST00000471655 SCAF8Q9UPN6 1271 aaKnown RBP18.72■□□□□ 0.59
VPS8-221ENST00000471655 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
VPS8-221ENST00000471655 MYO1BO43795 1136 aa18.71■□□□□ 0.59
VPS8-221ENST00000471655 CIAO1O76071 339 aa18.71■□□□□ 0.59
VPS8-221ENST00000471655 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.59
VPS8-221ENST00000471655 ATG9AQ7Z3C6 839 aa18.71■□□□□ 0.59
VPS8-221ENST00000471655 VPS37DQ86XT2 251 aa18.71■□□□□ 0.59
VPS8-221ENST00000471655 REM2Q8IYK8 340 aaPredicted RBP18.71■□□□□ 0.59
VPS8-221ENST00000471655 PRMT6Q96LA8 375 aaPredicted RBP18.71■□□□□ 0.59
VPS8-221ENST00000471655 SERPINA10Q9UK55 444 aa18.71■□□□□ 0.59
VPS8-221ENST00000471655 JAG2Q9Y219 1238 aa18.71■□□□□ 0.59
VPS8-221ENST00000471655 ECM29Q5VYK3 1845 aa18.7■□□□□ 0.58
VPS8-221ENST00000471655 F8W031 263 aaPredicted RBP18.7■□□□□ 0.58
VPS8-221ENST00000471655 IFIT1P09914 478 aaKnown RBP18.7■□□□□ 0.58
VPS8-221ENST00000471655 KIF23Q02241 960 aaPredicted RBP18.7■□□□□ 0.58
VPS8-221ENST00000471655 TBC1D22AQ8WUA7 517 aa18.7■□□□□ 0.58
VPS8-221ENST00000471655 DEFB129Q9H1M3 183 aa18.7■□□□□ 0.58
VPS8-221ENST00000471655 GNAI3P08754 354 aa18.69■□□□□ 0.58
VPS8-221ENST00000471655 RASAL3Q86YV0 1011 aa18.69■□□□□ 0.58
VPS8-221ENST00000471655 LPIN2Q92539 896 aa18.69■□□□□ 0.58
VPS8-221ENST00000471655 MEIS3Q99687 375 aa18.69■□□□□ 0.58
VPS8-221ENST00000471655 SAGE1Q9NXZ1 904 aa18.69■□□□□ 0.58
VPS8-221ENST00000471655 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
VPS8-221ENST00000471655 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
VPS8-221ENST00000471655 UBE2Q2LH0YL09 131 aa18.68■□□□□ 0.58
VPS8-221ENST00000471655 BCAMP50895 628 aa18.68■□□□□ 0.58
VPS8-221ENST00000471655 HDLBPQ00341 1268 aaKnown RBP18.68■□□□□ 0.58
VPS8-221ENST00000471655 HNRNPUQ00839 825 aaKnown RBP eCLIP18.68■□□□□ 0.58
VPS8-221ENST00000471655 ATF7IPQ6VMQ6 1270 aa18.68■□□□□ 0.58
VPS8-221ENST00000471655 MOB2Q70IA6 237 aa18.68■□□□□ 0.58
VPS8-221ENST00000471655 MRIQ9BWK5 157 aa18.68■□□□□ 0.58
VPS8-221ENST00000471655 PCDHAC2Q9Y5I4 1007 aa18.68■□□□□ 0.58
VPS8-221ENST00000471655 ARAP2Q8WZ64 1704 aa18.68■□□□□ 0.58
VPS8-221ENST00000471655 BCAR3O75815 825 aa18.67■□□□□ 0.58
VPS8-221ENST00000471655 SLC5A1P13866 664 aa18.67■□□□□ 0.58
VPS8-221ENST00000471655 TRIM27P14373 513 aa18.67■□□□□ 0.58
VPS8-221ENST00000471655 ARMC9Q7Z3E5 817 aa18.67■□□□□ 0.58
VPS8-221ENST00000471655 CSRNP1Q96S65 589 aa18.67■□□□□ 0.58
VPS8-221ENST00000471655 COPRSQ9NQ92 184 aa18.67■□□□□ 0.58
VPS8-221ENST00000471655 SUGT1Q9Y2Z0 365 aa18.67■□□□□ 0.58
VPS8-221ENST00000471655 ZBTB22O15209 634 aa18.66■□□□□ 0.58
VPS8-221ENST00000471655 FRAT2O75474 233 aaPredicted RBP18.66■□□□□ 0.58
VPS8-221ENST00000471655 IL15P40933 162 aaPredicted RBP18.66■□□□□ 0.58
VPS8-221ENST00000471655 RBM5P52756 815 aaKnown RBP eCLIP18.66■□□□□ 0.58
VPS8-221ENST00000471655 MTX1Q13505 466 aa18.66■□□□□ 0.58
VPS8-221ENST00000471655 TTLL12Q14166 644 aaPredicted RBP18.66■□□□□ 0.58
VPS8-221ENST00000471655 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
VPS8-221ENST00000471655 LDLRAD1Q5T700 205 aa18.66■□□□□ 0.58
VPS8-221ENST00000471655 CEP126Q9P2H0 1117 aa18.66■□□□□ 0.58
VPS8-221ENST00000471655 IQSEC3Q9UPP2 1182 aaPredicted RBP18.66■□□□□ 0.58
VPS8-221ENST00000471655 CLRN2A0PK11 232 aa18.65■□□□□ 0.58
VPS8-221ENST00000471655 UNCXA6NJT0 531 aa18.65■□□□□ 0.58
VPS8-221ENST00000471655 CRKP46108 304 aa18.65■□□□□ 0.58
VPS8-221ENST00000471655 TNFAIP1Q13829 316 aa18.65■□□□□ 0.58
VPS8-221ENST00000471655 SUPT20HL1Q3ZLR7 823 aa18.65■□□□□ 0.58
VPS8-221ENST00000471655 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
VPS8-221ENST00000471655 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
VPS8-221ENST00000471655 TSKSQ9UJT2 592 aa18.65■□□□□ 0.58
VPS8-221ENST00000471655 CHAF1AQ13111 956 aaPredicted RBP18.64■□□□□ 0.57
VPS8-221ENST00000471655 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms