RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 PDE8AO60658 829 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 PCCAP05165 728 aaPredicted RBP11.76□□□□□ -0.53
CPSF4-211ENST00000471455 SLC10A3P09131 477 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 GNAI1P63096 354 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 KIF23Q02241 960 aaPredicted RBP11.76□□□□□ -0.53
CPSF4-211ENST00000471455 CAMK2BQ13554 666 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
CPSF4-211ENST00000471455 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 CDC5LQ99459 802 aaKnown RBP11.76□□□□□ -0.53
CPSF4-211ENST00000471455 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 CWC25Q9NXE8 425 aaPredicted RBP11.76□□□□□ -0.53
CPSF4-211ENST00000471455 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 PITPNM2Q9BZ72 1349 aa11.76□□□□□ -0.53
CPSF4-211ENST00000471455 FAM155AB1AL88 458 aaPredicted RBP11.75□□□□□ -0.53
CPSF4-211ENST00000471455 EGFRP00533 1210 aa11.75□□□□□ -0.53
CPSF4-211ENST00000471455 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
CPSF4-211ENST00000471455 ATP2B4P23634 1241 aa11.75□□□□□ -0.53
CPSF4-211ENST00000471455 ZNF280AP59817 542 aaPredicted RBP11.75□□□□□ -0.53
CPSF4-211ENST00000471455 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
CPSF4-211ENST00000471455 MYD88Q99836 296 aa11.75□□□□□ -0.53
CPSF4-211ENST00000471455 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
CPSF4-211ENST00000471455 PDE4DIPQ5VU43 2346 aa11.75□□□□□ -0.53
CPSF4-211ENST00000471455 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
CPSF4-211ENST00000471455 AKAP11Q9UKA4 1901 aa11.74□□□□□ -0.53
CPSF4-211ENST00000471455 ANGEL2Q5VTE6 544 aaKnown RBP11.74□□□□□ -0.53
CPSF4-211ENST00000471455 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
CPSF4-211ENST00000471455 RNF186Q9NXI6 227 aa11.74□□□□□ -0.53
CPSF4-211ENST00000471455 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
CPSF4-211ENST00000471455 USP17L3A6NCW0 530 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 USP17L4A6NCW7 530 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 TRPA1O75762 1119 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 POLR2AP24928 1970 aaKnown RBP11.73□□□□□ -0.53
CPSF4-211ENST00000471455 NF2P35240 595 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 MMP14P50281 582 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 SCARF1Q14162 830 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 PSME4Q14997 1843 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 CCDC30Q5VVM6 783 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 USP17L1Q7RTZ2 530 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 CTU1Q7Z7A3 348 aaKnown RBP11.73□□□□□ -0.53
CPSF4-211ENST00000471455 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 ZIC5Q96T25 663 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 METTL22Q9BUU2 404 aaPredicted RBP11.73□□□□□ -0.53
CPSF4-211ENST00000471455 MYOZ2Q9NPC6 264 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 SEC31BQ9NQW1 1179 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
CPSF4-211ENST00000471455 MED23Q9ULK4 1368 aa11.72□□□□□ -0.53
CPSF4-211ENST00000471455 DDX10Q13206 875 aaKnown RBP11.72□□□□□ -0.53
CPSF4-211ENST00000471455 DLK2Q6UY11 383 aa11.72□□□□□ -0.53
CPSF4-211ENST00000471455 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
CPSF4-211ENST00000471455 COL4A1P02462 1669 aa11.71□□□□□ -0.53
CPSF4-211ENST00000471455 CTSWP56202 376 aa11.71□□□□□ -0.53
CPSF4-211ENST00000471455 PKN2Q16513 984 aaKnown RBP11.71□□□□□ -0.53
CPSF4-211ENST00000471455 STK31Q9BXU1 1019 aa11.71□□□□□ -0.53
CPSF4-211ENST00000471455 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
CPSF4-211ENST00000471455 ELL2O00472 640 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-211ENST00000471455 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-211ENST00000471455 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-211ENST00000471455 CSRNP1Q96S65 589 aa11.7□□□□□ -0.54
CPSF4-211ENST00000471455 GMLQ99445 158 aa11.7□□□□□ -0.54
CPSF4-211ENST00000471455 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-211ENST00000471455 HDAC9Q9UKV0 1011 aa11.7□□□□□ -0.54
CPSF4-211ENST00000471455 ASTN2O75129 1339 aaPredicted RBP11.69□□□□□ -0.54
CPSF4-211ENST00000471455 APAF1O14727 1248 aa11.69□□□□□ -0.54
CPSF4-211ENST00000471455 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
CPSF4-211ENST00000471455 SREBF2Q12772 1141 aa11.69□□□□□ -0.54
CPSF4-211ENST00000471455 KSR2Q6VAB6 950 aa11.69□□□□□ -0.54
CPSF4-211ENST00000471455 FBXW7Q969H0 707 aa11.69□□□□□ -0.54
CPSF4-211ENST00000471455 COA1Q9GZY4 146 aa11.69□□□□□ -0.54
CPSF4-211ENST00000471455 MAP3K2Q9Y2U5 619 aa11.69□□□□□ -0.54
CPSF4-211ENST00000471455 MYH3P11055 1940 aa11.68□□□□□ -0.54
CPSF4-211ENST00000471455 STRIP1Q5VSL9 837 aa11.68□□□□□ -0.54
CPSF4-211ENST00000471455 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
CPSF4-211ENST00000471455 APOBEC3FQ8IUX4 373 aaKnown RBP11.68□□□□□ -0.54
CPSF4-211ENST00000471455 ANKRD2Q9GZV1 360 aa11.68□□□□□ -0.54
CPSF4-211ENST00000471455 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
CPSF4-211ENST00000471455 PI4KAP2A4QPH2 592 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 KCNJ4P48050 445 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
CPSF4-211ENST00000471455 SOX10P56693 466 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 NOM1Q5C9Z4 860 aaKnown RBP11.67□□□□□ -0.54
CPSF4-211ENST00000471455 DACT2Q5SW24 774 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 ARMC9Q7Z3E5 817 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 PI4KAP1Q8N8J0 262 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 C8orf58Q8NAV2 365 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-211ENST00000471455 MINPP1Q9UNW1 487 aa11.67□□□□□ -0.54
CPSF4-211ENST00000471455 COL1A1P02452 1464 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-211ENST00000471455 JARID2Q92833 1246 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-211ENST00000471455 MPHOSPH8Q99549 860 aa11.66□□□□□ -0.54
CPSF4-211ENST00000471455 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
CPSF4-211ENST00000471455 GREM2Q9H772 168 aa11.66□□□□□ -0.54
CPSF4-211ENST00000471455 ZNF804BA4D1E1 1349 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms