RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 CERS5Q8N5B7 392 aa21.88■■□□□ 1.09
VPS72-204ENST00000471423 SMC1BQ8NDV3 1235 aa21.88■■□□□ 1.09
VPS72-204ENST00000471423 NEUROD6Q96NK8 337 aa21.88■■□□□ 1.09
VPS72-204ENST00000471423 MYH13Q9UKX3 1938 aa21.87■■□□□ 1.09
VPS72-204ENST00000471423 USP17L8P0C7I0 530 aa21.87■■□□□ 1.09
VPS72-204ENST00000471423 PHKA1P46020 1223 aa21.87■■□□□ 1.09
VPS72-204ENST00000471423 CHAF1AQ13111 956 aaPredicted RBP21.87■■□□□ 1.09
VPS72-204ENST00000471423 TBC1D10BQ4KMP7 808 aaPredicted RBP21.87■■□□□ 1.09
VPS72-204ENST00000471423 SAMD7Q7Z3H4 446 aa21.87■■□□□ 1.09
VPS72-204ENST00000471423 XAGE2Q96GT9 111 aa21.87■■□□□ 1.09
VPS72-204ENST00000471423 CLEC11AQ9Y240 323 aa21.87■■□□□ 1.09
VPS72-204ENST00000471423 COL1A1P02452 1464 aaPredicted RBP21.87■■□□□ 1.09
VPS72-204ENST00000471423 EGFRP00533 1210 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 ZNF280AP59817 542 aaPredicted RBP21.86■■□□□ 1.09
VPS72-204ENST00000471423 HSP90AB4PQ58FF6 505 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 TNNI3KQ59H18 835 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 CHADLQ6NUI6 762 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 ERC1Q8IUD2 1116 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 KIAA0825Q8IV33 1275 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 GPR108Q9NPR9 543 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 FPGT-TNNI3KV9GXZ4 949 aa21.86■■□□□ 1.09
VPS72-204ENST00000471423 APBB1O00213 710 aa21.85■■□□□ 1.09
VPS72-204ENST00000471423 HIRAP54198 1017 aaPredicted RBP21.85■■□□□ 1.09
VPS72-204ENST00000471423 FKBP1AP62942 108 aaKnown RBP21.85■■□□□ 1.09
VPS72-204ENST00000471423 FSTL1Q12841 308 aa21.85■■□□□ 1.09
VPS72-204ENST00000471423 MFSD14BQ5SR56 506 aa21.85■■□□□ 1.09
VPS72-204ENST00000471423 RBM26Q5T8P6 1007 aaKnown RBP21.85■■□□□ 1.09
VPS72-204ENST00000471423 CCDC102BQ68D86 513 aa21.85■■□□□ 1.09
VPS72-204ENST00000471423 PCDHB15Q9Y5E8 787 aa21.85■■□□□ 1.09
VPS72-204ENST00000471423 KIF4BQ2VIQ3 1234 aa21.84■■□□□ 1.09
VPS72-204ENST00000471423 GNL3LQ9NVN8 582 aaKnown RBP21.84■■□□□ 1.09
VPS72-204ENST00000471423 F8W031 263 aaPredicted RBP21.83■■□□□ 1.09
VPS72-204ENST00000471423 GORABQ5T7V8 394 aa21.83■■□□□ 1.09
VPS72-204ENST00000471423 OGFOD1Q8N543 542 aa21.83■■□□□ 1.09
VPS72-204ENST00000471423 RHPN1Q8TCX5 695 aa21.83■■□□□ 1.09
VPS72-204ENST00000471423 MYOZ2Q9NPC6 264 aa21.83■■□□□ 1.09
VPS72-204ENST00000471423 MAP1SQ66K74 1059 aaPredicted RBP21.82■■□□□ 1.08
VPS72-204ENST00000471423 EXOC6Q8TAG9 804 aa21.82■■□□□ 1.08
VPS72-204ENST00000471423 TBC1D22AQ8WUA7 517 aa21.81■■□□□ 1.08
VPS72-204ENST00000471423 EAF2Q96CJ1 260 aaPredicted RBP21.81■■□□□ 1.08
VPS72-204ENST00000471423 KIF1BPQ96EK5 621 aa21.81■■□□□ 1.08
VPS72-204ENST00000471423 DBNDD2Q9BQY9 259 aa21.81■■□□□ 1.08
VPS72-204ENST00000471423 IL1RAPL2Q9NP60 686 aa21.81■■□□□ 1.08
VPS72-204ENST00000471423 TLR7Q9NYK1 1049 aaKnown RBP21.81■■□□□ 1.08
VPS72-204ENST00000471423 HDAC9Q9UKV0 1011 aa21.81■■□□□ 1.08
VPS72-204ENST00000471423 SEMA3EO15041 775 aa21.8■■□□□ 1.08
VPS72-204ENST00000471423 RAB11FIP3O75154 756 aa21.8■■□□□ 1.08
VPS72-204ENST00000471423 IRX6P78412 446 aaPredicted RBP21.8■■□□□ 1.08
VPS72-204ENST00000471423 RASGRF1Q13972 1273 aa21.8■■□□□ 1.08
VPS72-204ENST00000471423 GRIK5Q16478 980 aa21.8■■□□□ 1.08
VPS72-204ENST00000471423 CCDC8Q9H0W5 538 aaPredicted RBP21.8■■□□□ 1.08
VPS72-204ENST00000471423 DBNLQ9UJU6 430 aaKnown RBP21.8■■□□□ 1.08
VPS72-204ENST00000471423 DENND2AQ9ULE3 1009 aa21.8■■□□□ 1.08
VPS72-204ENST00000471423 AACSQ86V21 672 aa21.79■■□□□ 1.08
VPS72-204ENST00000471423 WDR66Q8TBY9 1149 aa21.79■■□□□ 1.08
VPS72-204ENST00000471423 ZC3H15Q8WU90 426 aaKnown RBP21.79■■□□□ 1.08
VPS72-204ENST00000471423 ASTN2O75129 1339 aaPredicted RBP21.79■■□□□ 1.08
VPS72-204ENST00000471423 ARID4AP29374 1257 aaPredicted RBP21.78■■□□□ 1.08
VPS72-204ENST00000471423 MMP14P50281 582 aa21.78■■□□□ 1.08
VPS72-204ENST00000471423 CNTROBQ8N137 903 aa21.78■■□□□ 1.08
VPS72-204ENST00000471423 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
VPS72-204ENST00000471423 PGAP2Q9UHJ9 254 aa21.78■■□□□ 1.08
VPS72-204ENST00000471423 TTF2Q9UNY4 1162 aaKnown RBP21.78■■□□□ 1.08
VPS72-204ENST00000471423 ZBTB22O15209 634 aa21.77■■□□□ 1.08
VPS72-204ENST00000471423 AAMPQ13685 434 aa21.77■■□□□ 1.08
VPS72-204ENST00000471423 SCARF1Q14162 830 aa21.77■■□□□ 1.08
VPS72-204ENST00000471423 TTC39AQ5SRH9 613 aa21.77■■□□□ 1.08
VPS72-204ENST00000471423 DCTPP1Q9H773 170 aa21.77■■□□□ 1.08
VPS72-204ENST00000471423 GGA3Q9NZ52 723 aa21.77■■□□□ 1.08
VPS72-204ENST00000471423 PDS5AQ29RF7 1337 aaKnown RBP21.77■■□□□ 1.07
VPS72-204ENST00000471423 ITGBL1O95965 494 aaPredicted RBP21.76■■□□□ 1.07
VPS72-204ENST00000471423 NBPF9Q3BBW0 867 aa21.76■■□□□ 1.07
VPS72-204ENST00000471423 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
VPS72-204ENST00000471423 PI16Q6UXB8 463 aa21.76■■□□□ 1.07
VPS72-204ENST00000471423 CLASRPQ8N2M8 674 aaKnown RBP21.76■■□□□ 1.07
VPS72-204ENST00000471423 WNT10BO00744 389 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 UQCRFS1P1P0C7P4 283 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 MCAMP43121 646 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 LRRCC1Q9C099 1032 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 HMG20BQ9P0W2 317 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 PCDHAC2Q9Y5I4 1007 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 SALL1Q9NSC2 1324 aa21.75■■□□□ 1.07
VPS72-204ENST00000471423 SMARCA5O60264 1052 aaPredicted RBP21.74■■□□□ 1.07
VPS72-204ENST00000471423 HSPA6P17066 643 aa21.74■■□□□ 1.07
VPS72-204ENST00000471423 PRDX5P30044 214 aa21.74■■□□□ 1.07
VPS72-204ENST00000471423 RBM5P52756 815 aaKnown RBP eCLIP21.74■■□□□ 1.07
VPS72-204ENST00000471423 DLGAP5Q15398 846 aa21.74■■□□□ 1.07
VPS72-204ENST00000471423 ANGEL2Q5VTE6 544 aaKnown RBP21.74■■□□□ 1.07
VPS72-204ENST00000471423 SPATA5Q8NB90 893 aa21.74■■□□□ 1.07
VPS72-204ENST00000471423 DCPSQ96C86 337 aaKnown RBP21.74■■□□□ 1.07
VPS72-204ENST00000471423 ZBED3Q96IU2 234 aaPredicted RBP21.74■■□□□ 1.07
VPS72-204ENST00000471423 GLIS2Q9BZE0 524 aaPredicted RBP21.74■■□□□ 1.07
VPS72-204ENST00000471423 SERPINA10Q9UK55 444 aa21.74■■□□□ 1.07
VPS72-204ENST00000471423 SUGT1Q9Y2Z0 365 aa21.74■■□□□ 1.07
VPS72-204ENST00000471423 PASKQ96RG2 1323 aa21.74■■□□□ 1.07
VPS72-204ENST00000471423 TRAF5O00463 557 aa21.73■■□□□ 1.07
VPS72-204ENST00000471423 MTMR14Q8NCE2 650 aa21.73■■□□□ 1.07
VPS72-204ENST00000471423 MAST3O60307 1309 aa21.73■■□□□ 1.07
VPS72-204ENST00000471423 SPDYE2BA6NHP3 402 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms