RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 CERS5Q8N5B7 392 aa19.56■□□□□ 0.72
HDAC6-218ENST00000470942 TDRD7Q8NHU6 1098 aaKnown RBP19.56■□□□□ 0.72
HDAC6-218ENST00000470942 PA2G4Q9UQ80 394 aaKnown RBP19.56■□□□□ 0.72
HDAC6-218ENST00000470942 FRAT2O75474 233 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-218ENST00000470942 GNAI2P04899 355 aa19.55■□□□□ 0.72
HDAC6-218ENST00000470942 PUM3Q15397 648 aaKnown RBP19.55■□□□□ 0.72
HDAC6-218ENST00000470942 FBXO33Q7Z6M2 555 aa19.55■□□□□ 0.72
HDAC6-218ENST00000470942 FBXO3Q9UK99 471 aa19.55■□□□□ 0.72
HDAC6-218ENST00000470942 IQSEC3Q9UPP2 1182 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-218ENST00000470942 TLL2Q9Y6L7 1015 aa19.55■□□□□ 0.72
HDAC6-218ENST00000470942 FAM205AQ6ZU69 1335 aa19.54■□□□□ 0.72
HDAC6-218ENST00000470942 WNT10BO00744 389 aa19.54■□□□□ 0.72
HDAC6-218ENST00000470942 SRGAP3O43295 1099 aa19.54■□□□□ 0.72
HDAC6-218ENST00000470942 CIAO1O76071 339 aa19.54■□□□□ 0.72
HDAC6-218ENST00000470942 FKBP1AP62942 108 aaKnown RBP19.54■□□□□ 0.72
HDAC6-218ENST00000470942 GRM1Q13255 1194 aa19.54■□□□□ 0.72
HDAC6-218ENST00000470942 DZIP1LQ8IYY4 767 aaKnown RBP19.54■□□□□ 0.72
HDAC6-218ENST00000470942 CEP126Q9P2H0 1117 aa19.54■□□□□ 0.72
HDAC6-218ENST00000470942 SLC5A1P13866 664 aa19.53■□□□□ 0.72
HDAC6-218ENST00000470942 FGFR2P21802 821 aa19.53■□□□□ 0.72
HDAC6-218ENST00000470942 BCAMP50895 628 aa19.53■□□□□ 0.72
HDAC6-218ENST00000470942 COPRSQ9NQ92 184 aa19.53■□□□□ 0.72
HDAC6-218ENST00000470942 SCAF8Q9UPN6 1271 aaKnown RBP19.53■□□□□ 0.72
HDAC6-218ENST00000470942 PITPNM2Q9BZ72 1349 aa19.52■□□□□ 0.72
HDAC6-218ENST00000470942 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.72
HDAC6-218ENST00000470942 IL15P40933 162 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-218ENST00000470942 CHAF1AQ13111 956 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-218ENST00000470942 DLGAP5Q15398 846 aa19.52■□□□□ 0.72
HDAC6-218ENST00000470942 MFSD14BQ5SR56 506 aa19.52■□□□□ 0.72
HDAC6-218ENST00000470942 SAPCD2Q86UD0 394 aa19.52■□□□□ 0.72
HDAC6-218ENST00000470942 ITPRIPQ8IWB1 547 aa19.52■□□□□ 0.72
HDAC6-218ENST00000470942 LPIN2Q92539 896 aa19.52■□□□□ 0.72
HDAC6-218ENST00000470942 CDCA5Q96FF9 252 aa19.52■□□□□ 0.72
HDAC6-218ENST00000470942 PCNTO95613 3336 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 MYH13Q9UKX3 1938 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 ECE1P42892 770 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 MTX1Q13505 466 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 ATP2B3Q16720 1220 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 CYP4F22Q6NT55 531 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 C2orf69Q8N8R5 385 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 CAPNS2Q96L46 248 aa19.51■□□□□ 0.71
HDAC6-218ENST00000470942 GBA2Q9HCG7 927 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-218ENST00000470942 HSPA1AP0DMV8 641 aaKnown RBP19.5■□□□□ 0.71
HDAC6-218ENST00000470942 HSPA1BP0DMV9 641 aaKnown RBP19.5■□□□□ 0.71
HDAC6-218ENST00000470942 RLBP1P12271 317 aa19.5■□□□□ 0.71
HDAC6-218ENST00000470942 RBM5P52756 815 aaKnown RBP eCLIP19.5■□□□□ 0.71
HDAC6-218ENST00000470942 CFAP100Q494V2 611 aa19.5■□□□□ 0.71
HDAC6-218ENST00000470942 ECM29Q5VYK3 1845 aa19.49■□□□□ 0.71
HDAC6-218ENST00000470942 ARAP2Q8WZ64 1704 aa19.49■□□□□ 0.71
HDAC6-218ENST00000470942 HUNKP57058 714 aa19.49■□□□□ 0.71
HDAC6-218ENST00000470942 ZBED3Q96IU2 234 aaPredicted RBP19.49■□□□□ 0.71
HDAC6-218ENST00000470942 TTF2Q9UNY4 1162 aaKnown RBP19.49■□□□□ 0.71
HDAC6-218ENST00000470942 PRAMEF18Q5VWM3 479 aa19.48■□□□□ 0.71
HDAC6-218ENST00000470942 MTMR14Q8NCE2 650 aa19.48■□□□□ 0.71
HDAC6-218ENST00000470942 TBC1D22AQ8WUA7 517 aa19.48■□□□□ 0.71
HDAC6-218ENST00000470942 PCDHAC2Q9Y5I4 1007 aa19.48■□□□□ 0.71
HDAC6-218ENST00000470942 PNMA6EA0A0J9YXQ4 647 aa19.47■□□□□ 0.71
HDAC6-218ENST00000470942 MYO1BO43795 1136 aa19.47■□□□□ 0.71
HDAC6-218ENST00000470942 APOBEC3FQ8IUX4 373 aaKnown RBP19.47■□□□□ 0.71
HDAC6-218ENST00000470942 PANK1Q8TE04 598 aa19.47■□□□□ 0.71
HDAC6-218ENST00000470942 HHIPL1Q96JK4 782 aa19.47■□□□□ 0.71
HDAC6-218ENST00000470942 C1orf115Q9H7X2 142 aa19.47■□□□□ 0.71
HDAC6-218ENST00000470942 MS4A1P11836 297 aa19.46■□□□□ 0.71
HDAC6-218ENST00000470942 TFCP2Q12800 502 aa19.46■□□□□ 0.71
HDAC6-218ENST00000470942 G3BP1Q13283 466 aaKnown RBP eCLIP19.46■□□□□ 0.71
HDAC6-218ENST00000470942 PRMT6Q96LA8 375 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-218ENST00000470942 GNL3LQ9NVN8 582 aaKnown RBP19.46■□□□□ 0.71
HDAC6-218ENST00000470942 RCAN3Q9UKA8 241 aa19.46■□□□□ 0.71
HDAC6-218ENST00000470942 SPDYE2BA6NHP3 402 aa19.45■□□□□ 0.7
HDAC6-218ENST00000470942 ZBTB7BO15156 539 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-218ENST00000470942 AOC2O75106 756 aa19.45■□□□□ 0.7
HDAC6-218ENST00000470942 SPDYE6P0CI01 402 aa19.45■□□□□ 0.7
HDAC6-218ENST00000470942 GRIK5Q16478 980 aa19.45■□□□□ 0.7
HDAC6-218ENST00000470942 AIDAQ96BJ3 306 aa19.45■□□□□ 0.7
HDAC6-218ENST00000470942 VEZTQ9HBM0 779 aa19.45■□□□□ 0.7
HDAC6-218ENST00000470942 AKAP2Q9Y2D5 859 aa19.45■□□□□ 0.7
HDAC6-218ENST00000470942 CLRN2A0PK11 232 aa19.44■□□□□ 0.7
HDAC6-218ENST00000470942 NF2P35240 595 aa19.44■□□□□ 0.7
HDAC6-218ENST00000470942 TIMM10P62072 90 aa19.44■□□□□ 0.7
HDAC6-218ENST00000470942 ATP8B2P98198 1209 aa19.44■□□□□ 0.7
HDAC6-218ENST00000470942 RGMBQ6NW40 437 aa19.44■□□□□ 0.7
HDAC6-218ENST00000470942 SERPINA10Q9UK55 444 aa19.44■□□□□ 0.7
HDAC6-218ENST00000470942 ADORA1P30542 326 aa19.43■□□□□ 0.7
HDAC6-218ENST00000470942 CRKP46108 304 aa19.43■□□□□ 0.7
HDAC6-218ENST00000470942 MAP2K1Q02750 393 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-218ENST00000470942 TTLL12Q14166 644 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-218ENST00000470942 WDR66Q8TBY9 1149 aa19.43■□□□□ 0.7
HDAC6-218ENST00000470942 MAP2K2P36507 400 aa19.42■□□□□ 0.7
HDAC6-218ENST00000470942 PHKA1P46020 1223 aa19.42■□□□□ 0.7
HDAC6-218ENST00000470942 ZNF157P51786 506 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-218ENST00000470942 NEUROD6Q96NK8 337 aa19.42■□□□□ 0.7
HDAC6-218ENST00000470942 DEFB129Q9H1M3 183 aa19.42■□□□□ 0.7
HDAC6-218ENST00000470942 WBP1LQ9NX94 342 aa19.42■□□□□ 0.7
HDAC6-218ENST00000470942 AOX1Q06278 1338 aa19.42■□□□□ 0.7
HDAC6-218ENST00000470942 PAPPA2Q9BXP8 1791 aa19.42■□□□□ 0.7
HDAC6-218ENST00000470942 THSD7BQ9C0I4 1608 aa19.41■□□□□ 0.7
HDAC6-218ENST00000470942 A0A1B0GUL7 405 aa19.41■□□□□ 0.7
HDAC6-218ENST00000470942 FOXN1O15353 648 aa19.41■□□□□ 0.7
HDAC6-218ENST00000470942 FKBP1BP68106 108 aa19.41■□□□□ 0.7
HDAC6-218ENST00000470942 OS9Q13438 667 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms