RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ADGRA1Q86SQ6 560 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 TICAM2Q86XR7 235 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 C2CD5Q86YS7 1000 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 SP8Q8IXZ3 490 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 TBC1D16Q8TBP0 767 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 HELLSQ9NRZ9 838 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 JAG2Q9Y219 1238 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 LEMD3Q9Y2U8 911 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 ATP6V0A2Q9Y487 856 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 KIF13BQ9NQT8 1826 aa10.03□□□□□ -0.8
GTF3A-206ENST00000470606 UFL1O94874 794 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 ZBTB7AO95365 584 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 CAVIN4Q5BKX8 364 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
GTF3A-206ENST00000470606 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 SNED1Q8TER0 1413 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 SNX21Q969T3 373 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 MASTLQ96GX5 879 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 UPF3BQ9BZI7 483 aaKnown RBP10.02□□□□□ -0.81
GTF3A-206ENST00000470606 DLEC1Q9Y238 1755 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 ZNF532Q9HCE3 1301 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.81
GTF3A-206ENST00000470606 SLC27A2O14975 620 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 EIF5BO60841 1220 aaKnown RBP10.01□□□□□ -0.81
GTF3A-206ENST00000470606 HSPD1P10809 573 aaKnown RBP10.01□□□□□ -0.81
GTF3A-206ENST00000470606 CPA1P15085 419 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 KCNA3P22001 575 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 ANAPC15P60006 121 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 RABEP1Q15276 862 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 TTF1Q15361 905 aaPredicted RBP10.01□□□□□ -0.81
GTF3A-206ENST00000470606 GRIK5Q16478 980 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 CREB3L3Q68CJ9 461 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 C7orf43Q8WVR3 580 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 APPBP2Q92624 585 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
GTF3A-206ENST00000470606 LAMA4Q16363 1823 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 ZFYP08048 801 aaPredicted RBP10.01□□□□□ -0.81
GTF3A-206ENST00000470606 R3HDM1Q15032 1099 aaKnown RBP10.01□□□□□ -0.81
GTF3A-206ENST00000470606 UBE3CQ15386 1083 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 VPS37DQ86XT2 251 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 MAGEB6Q8N7X4 407 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 TDRD7Q8NHU6 1098 aaKnown RBP10.01□□□□□ -0.81
GTF3A-206ENST00000470606 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
GTF3A-206ENST00000470606 H0YIN7 160 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 GPAA1O43292 621 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 CYP21A2P08686 494 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 PRDX5P30044 214 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 TTLL5Q6EMB2 1281 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 STYK1Q6J9G0 422 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 ABCF2Q9UG63 623 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 GGA1Q9UJY5 639 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
GTF3A-206ENST00000470606 SCN9AQ15858 1988 aa10□□□□□ -0.81
GTF3A-206ENST00000470606 ZBTB22O15209 634 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 ATP2B4P23634 1241 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 ALDH1B1P30837 517 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 NEK4P51957 841 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 STOX1Q6ZVD7 989 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 CD209Q9NNX6 404 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 GNL3LQ9NVN8 582 aaKnown RBP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 DENND2AQ9ULE3 1009 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 CCDC88AQ3V6T2 1871 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 PDS5AQ29RF7 1337 aaKnown RBP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 RPAP1Q9BWH6 1393 aaPredicted RBP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 PSDA5PKW4 1024 aaPredicted RBP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 SEMA3EO15041 775 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 MAP3K12Q12852 859 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 CHAF1AQ13111 956 aaPredicted RBP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 TMC4Q7Z404 712 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 NKX2-3Q8TAU0 364 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 TTC14Q96N46 770 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 STRBPQ96SI9 672 aaKnown RBP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 LRP2BPQ9P2M1 347 aa9.99□□□□□ -0.81
GTF3A-206ENST00000470606 ZNF219Q9P2Y4 722 aaPredicted RBP9.99□□□□□ -0.81
GTF3A-206ENST00000470606 C6orf229H3BNL8 230 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 PRKAB2O43741 272 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 FGAP02671 866 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 IL1R1P14778 569 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 MCCP23508 829 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 TSGA10IPQ3SY00 556 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 MPNDQ8N594 471 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 NSUN4Q96CB9 384 aaKnown RBP9.98□□□□□ -0.81
GTF3A-206ENST00000470606 NBPF3Q9H094 633 aa9.98□□□□□ -0.81
GTF3A-206ENST00000470606 ZNF646O15015 1829 aaPredicted RBP9.98□□□□□ -0.81
GTF3A-206ENST00000470606 BRCA1P38398 1863 aaKnown RBP9.98□□□□□ -0.81
GTF3A-206ENST00000470606 BAZ2AQ9UIF9 1905 aaKnown RBP9.98□□□□□ -0.81
GTF3A-206ENST00000470606 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 DPEP1P16444 411 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 MECOMQ03112 1051 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 LCORLQ8N3X6 602 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 MIGA1Q8NAN2 632 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 JAKMIP1Q96N16 626 aaKnown RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 ARMT1Q9H993 441 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms