RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
XRN1-208ENST00000470537 CSRNP1Q96S65 589 aa11.51□□□□□ -0.57
XRN1-208ENST00000470537 ZIC5Q96T25 663 aa11.51□□□□□ -0.57
XRN1-208ENST00000470537 ECE2O60344 883 aa11.5□□□□□ -0.57
XRN1-208ENST00000470537 SOX10P56693 466 aa11.5□□□□□ -0.57
XRN1-208ENST00000470537 AGBL3Q8NEM8 1001 aa11.5□□□□□ -0.57
XRN1-208ENST00000470537 ANKIB1Q9P2G1 1089 aa11.5□□□□□ -0.57
XRN1-208ENST00000470537 DBF4Q9UBU7 674 aaPredicted RBP11.5□□□□□ -0.57
XRN1-208ENST00000470537 DLG5Q8TDM6 1919 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 NF2P35240 595 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 MMP14P50281 582 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 PROSER3Q2NL68 480 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 CHMP4AQ9BY43 222 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 HYPKQ9NX55 129 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 GGA3Q9NZ52 723 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 POLLQ9UGP5 575 aa11.49□□□□□ -0.57
XRN1-208ENST00000470537 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 ADM5C9JUS6 153 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 ANXA1P04083 346 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 HOXB7P09629 217 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 TRIM28Q13263 835 aaKnown RBP11.48□□□□□ -0.57
XRN1-208ENST00000470537 NOM1Q5C9Z4 860 aaKnown RBP11.48□□□□□ -0.57
XRN1-208ENST00000470537 SLC51AQ86UW1 340 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 OGFOD1Q8N543 542 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 TBC1D16Q8TBP0 767 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 CELF1Q92879 486 aaKnown RBP11.48□□□□□ -0.57
XRN1-208ENST00000470537 CDCA5Q96FF9 252 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 GGA1Q9UJY5 639 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 PITPNM2Q9BZ72 1349 aa11.48□□□□□ -0.57
XRN1-208ENST00000470537 POLR2AP24928 1970 aaKnown RBP11.48□□□□□ -0.57
XRN1-208ENST00000470537 IRS4O14654 1257 aaPredicted RBP11.47□□□□□ -0.57
XRN1-208ENST00000470537 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
XRN1-208ENST00000470537 ZNF280AP59817 542 aaPredicted RBP11.47□□□□□ -0.57
XRN1-208ENST00000470537 GPSM2P81274 684 aa11.47□□□□□ -0.57
XRN1-208ENST00000470537 SCARF1Q14162 830 aa11.47□□□□□ -0.57
XRN1-208ENST00000470537 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
XRN1-208ENST00000470537 PODNQ7Z5L7 613 aa11.47□□□□□ -0.57
XRN1-208ENST00000470537 ISCA1Q9BUE6 129 aa11.47□□□□□ -0.57
XRN1-208ENST00000470537 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
XRN1-208ENST00000470537 UFL1O94874 794 aa11.46□□□□□ -0.57
XRN1-208ENST00000470537 EGFRP00533 1210 aa11.46□□□□□ -0.57
XRN1-208ENST00000470537 TMPOP42166 694 aaKnown RBP11.46□□□□□ -0.57
XRN1-208ENST00000470537 BCAMP50895 628 aa11.46□□□□□ -0.57
XRN1-208ENST00000470537 SREBF2Q12772 1141 aa11.46□□□□□ -0.57
XRN1-208ENST00000470537 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.57
XRN1-208ENST00000470537 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.57
XRN1-208ENST00000470537 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
XRN1-208ENST00000470537 LAPTM4BQ86VI4 370 aa11.46□□□□□ -0.57
XRN1-208ENST00000470537 IRX2Q9BZI1 471 aaPredicted RBP11.46□□□□□ -0.57
XRN1-208ENST00000470537 CHL1O00533 1208 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 ALDH1A1P00352 501 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 TM4SF4P48230 202 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 TTLL12Q14166 644 aaPredicted RBP11.45□□□□□ -0.58
XRN1-208ENST00000470537 FBXO46Q6PJ61 603 aaPredicted RBP11.45□□□□□ -0.58
XRN1-208ENST00000470537 DLK2Q6UY11 383 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 RIC3Q7Z5B4 369 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 RASAL3Q86YV0 1011 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
XRN1-208ENST00000470537 MYOZ2Q9NPC6 264 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 KIAA1468Q9P260 1216 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 CHPF2Q9P2E5 772 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 LAMB2P55268 1798 aa11.45□□□□□ -0.58
XRN1-208ENST00000470537 RTL9Q8NET4 1388 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 LRRC37AA6NMS7 1700 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 DPYSL4O14531 572 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 ATP2B4P23634 1241 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 INHBEP58166 350 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 EPAS1Q99814 870 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 KCNQ5Q9NR82 932 aa11.44□□□□□ -0.58
XRN1-208ENST00000470537 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
XRN1-208ENST00000470537 ZNF609O15014 1411 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 DDX60Q8IY21 1712 aaKnown RBP11.43□□□□□ -0.58
XRN1-208ENST00000470537 XDHP47989 1333 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 RALBP1Q15311 655 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
XRN1-208ENST00000470537 C6orf132Q5T0Z8 1188 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 INTS3Q68E01 1043 aaKnown RBP11.43□□□□□ -0.58
XRN1-208ENST00000470537 ARMC9Q7Z3E5 817 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 ANKRD18AQ8IVF6 992 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 CCDC191Q8NCU4 936 aa11.43□□□□□ -0.58
XRN1-208ENST00000470537 ZNF296Q8WUU4 475 aaPredicted RBP11.43□□□□□ -0.58
XRN1-208ENST00000470537 ZFRQ96KR1 1074 aaKnown RBP11.43□□□□□ -0.58
XRN1-208ENST00000470537 DUOX1Q9NRD9 1551 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 GPR25O00155 361 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 PDE8AO60658 829 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 FKTNO75072 461 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 TBC1D8O95759 1140 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 DDX58O95786 925 aaKnown RBP11.42□□□□□ -0.58
XRN1-208ENST00000470537 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 CDC5LQ99459 802 aaKnown RBP11.42□□□□□ -0.58
XRN1-208ENST00000470537 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms