RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 MYH13Q9UKX3 1938 aa17.61■□□□□ 0.41
COMMD3-208ENST00000470045 WNT10BO00744 389 aa17.61■□□□□ 0.41
COMMD3-208ENST00000470045 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
COMMD3-208ENST00000470045 PDE8BO95263 885 aa17.61■□□□□ 0.41
COMMD3-208ENST00000470045 ATF7IPQ6VMQ6 1270 aa17.61■□□□□ 0.41
COMMD3-208ENST00000470045 KIAA0825Q8IV33 1275 aa17.61■□□□□ 0.41
COMMD3-208ENST00000470045 SULF1Q8IWU6 871 aa17.61■□□□□ 0.41
COMMD3-208ENST00000470045 TDRD7Q8NHU6 1098 aaKnown RBP17.61■□□□□ 0.41
COMMD3-208ENST00000470045 ZBED3Q96IU2 234 aaPredicted RBP17.61■□□□□ 0.41
COMMD3-208ENST00000470045 FAM84BQ96KN1 310 aaPredicted RBP17.61■□□□□ 0.41
COMMD3-208ENST00000470045 HDAC5Q9UQL6 1122 aa17.61■□□□□ 0.41
COMMD3-208ENST00000470045 EYA2O00167 538 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 SASH1O94885 1247 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 GYG1P46976 350 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 NBPF9Q3BBW0 867 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 METTL24Q5JXM2 366 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 CAPNS2Q96L46 248 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 ZNF408Q9H9D4 720 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
COMMD3-208ENST00000470045 PAPPA2Q9BXP8 1791 aa17.6■□□□□ 0.41
COMMD3-208ENST00000470045 FGFR2P21802 821 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 HIBADHP31937 336 aaKnown RBP17.59■□□□□ 0.41
COMMD3-208ENST00000470045 ECE1P42892 770 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 CYP4F22Q6NT55 531 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 ATG9AQ7Z3C6 839 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 FBXO33Q7Z6M2 555 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 CDCA5Q96FF9 252 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 HDAC9Q9UKV0 1011 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
COMMD3-208ENST00000470045 CIAO1O76071 339 aa17.58■□□□□ 0.4
COMMD3-208ENST00000470045 GNAI3P08754 354 aa17.58■□□□□ 0.4
COMMD3-208ENST00000470045 MTMR14Q8NCE2 650 aa17.58■□□□□ 0.4
COMMD3-208ENST00000470045 GBA2Q9HCG7 927 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-208ENST00000470045 WBP1LQ9NX94 342 aa17.58■□□□□ 0.4
COMMD3-208ENST00000470045 MTX1Q13505 466 aa17.57■□□□□ 0.4
COMMD3-208ENST00000470045 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
COMMD3-208ENST00000470045 FRAT1Q92837 279 aaPredicted RBP17.57■□□□□ 0.4
COMMD3-208ENST00000470045 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
COMMD3-208ENST00000470045 ZKSCAN2Q63HK3 967 aa17.56■□□□□ 0.4
COMMD3-208ENST00000470045 FOXN1O15353 648 aa17.55■□□□□ 0.4
COMMD3-208ENST00000470045 HUNKP57058 714 aa17.55■□□□□ 0.4
COMMD3-208ENST00000470045 CAVIN4Q5BKX8 364 aa17.55■□□□□ 0.4
COMMD3-208ENST00000470045 PAXIP1Q6ZW49 1069 aaPredicted RBP17.55■□□□□ 0.4
COMMD3-208ENST00000470045 C2orf69Q8N8R5 385 aa17.55■□□□□ 0.4
COMMD3-208ENST00000470045 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
COMMD3-208ENST00000470045 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
COMMD3-208ENST00000470045 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
COMMD3-208ENST00000470045 MAP2K2P36507 400 aa17.54■□□□□ 0.4
COMMD3-208ENST00000470045 MAP2K1Q02750 393 aaPredicted RBP17.54■□□□□ 0.4
COMMD3-208ENST00000470045 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
COMMD3-208ENST00000470045 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
COMMD3-208ENST00000470045 APOBEC3FQ8IUX4 373 aaKnown RBP17.54■□□□□ 0.4
COMMD3-208ENST00000470045 CLUAP1Q96AJ1 413 aa17.54■□□□□ 0.4
COMMD3-208ENST00000470045 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
COMMD3-208ENST00000470045 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
COMMD3-208ENST00000470045 FKBP1BP68106 108 aa17.53■□□□□ 0.4
COMMD3-208ENST00000470045 COL13A1Q5TAT6 717 aaPredicted RBP17.53■□□□□ 0.4
COMMD3-208ENST00000470045 LPIN2Q92539 896 aa17.53■□□□□ 0.4
COMMD3-208ENST00000470045 SIL1Q9H173 461 aa17.53■□□□□ 0.4
COMMD3-208ENST00000470045 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
COMMD3-208ENST00000470045 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
COMMD3-208ENST00000470045 F8W031 263 aaPredicted RBP17.52■□□□□ 0.4
COMMD3-208ENST00000470045 AOC2O75106 756 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 SLC5A1P13866 664 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 IL15P40933 162 aaPredicted RBP17.52■□□□□ 0.4
COMMD3-208ENST00000470045 BCAMP50895 628 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 CFAP100Q494V2 611 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 RGMBQ6NW40 437 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 VPS37DQ86XT2 251 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 TMEM57Q8N5G2 664 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 PCDHAC2Q9Y5I4 1007 aa17.52■□□□□ 0.4
COMMD3-208ENST00000470045 FAM155AB1AL88 458 aaPredicted RBP17.51■□□□□ 0.39
COMMD3-208ENST00000470045 GRM1Q13255 1194 aa17.51■□□□□ 0.39
COMMD3-208ENST00000470045 TBC1D22AQ8WUA7 517 aa17.51■□□□□ 0.39
COMMD3-208ENST00000470045 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
COMMD3-208ENST00000470045 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
COMMD3-208ENST00000470045 SERPINA10Q9UK55 444 aa17.51■□□□□ 0.39
COMMD3-208ENST00000470045 IQSEC3Q9UPP2 1182 aaPredicted RBP17.51■□□□□ 0.39
COMMD3-208ENST00000470045 AOX1Q06278 1338 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 ZBTB22O15209 634 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 GNAI2P04899 355 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
COMMD3-208ENST00000470045 NOGQ13253 232 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 GRIK5Q16478 980 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 ATP2B3Q16720 1220 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 PRAMEF18Q5VWM3 479 aa17.5■□□□□ 0.39
COMMD3-208ENST00000470045 PRMT6Q96LA8 375 aaPredicted RBP17.5■□□□□ 0.39
COMMD3-208ENST00000470045 TTF2Q9UNY4 1162 aaKnown RBP17.5■□□□□ 0.39
COMMD3-208ENST00000470045 SSC5DA1L4H1 1573 aa17.49■□□□□ 0.39
COMMD3-208ENST00000470045 LAMB1P07942 1786 aa17.49■□□□□ 0.39
COMMD3-208ENST00000470045 CCDC102AQ96A19 550 aa17.49■□□□□ 0.39
COMMD3-208ENST00000470045 PRDM10Q9NQV6 1147 aa17.49■□□□□ 0.39
COMMD3-208ENST00000470045 PPP2R3BQ9Y5P8 575 aa17.49■□□□□ 0.39
COMMD3-208ENST00000470045 MYO1BO43795 1136 aa17.48■□□□□ 0.39
COMMD3-208ENST00000470045 SLC10A3P09131 477 aa17.48■□□□□ 0.39
COMMD3-208ENST00000470045 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
COMMD3-208ENST00000470045 RLBP1P12271 317 aa17.48■□□□□ 0.39
COMMD3-208ENST00000470045 HDLBPQ00341 1268 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms