RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 DIAPH3Q9NSV4 1193 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 RBM25P49756 843 aaKnown RBP15.4■□□□□ 0.06
TRAF4-208ENST00000469529 ZMYM1Q5SVZ6 1142 aa15.4■□□□□ 0.06
TRAF4-208ENST00000469529 EDC3Q96F86 508 aaKnown RBP15.4■□□□□ 0.06
TRAF4-208ENST00000469529 PSMD1Q99460 953 aa15.4■□□□□ 0.06
TRAF4-208ENST00000469529 ZC3H12CQ9C0D7 883 aaKnown RBP15.4■□□□□ 0.06
TRAF4-208ENST00000469529 CD209Q9NNX6 404 aa15.4■□□□□ 0.06
TRAF4-208ENST00000469529 SPEF2Q9C093 1822 aa15.4■□□□□ 0.06
TRAF4-208ENST00000469529 LRRC37AA6NMS7 1700 aa15.4■□□□□ 0.06
TRAF4-208ENST00000469529 C6orf229H3BNL8 230 aa15.39■□□□□ 0.05
TRAF4-208ENST00000469529 KLRK1P26718 216 aa15.39■□□□□ 0.05
TRAF4-208ENST00000469529 IL27Q8NEV9 243 aa15.39■□□□□ 0.05
TRAF4-208ENST00000469529 WDR66Q8TBY9 1149 aa15.39■□□□□ 0.05
TRAF4-208ENST00000469529 IL17RAQ96F46 866 aa15.39■□□□□ 0.05
TRAF4-208ENST00000469529 RBM19Q9Y4C8 960 aaKnown RBP15.39■□□□□ 0.05
TRAF4-208ENST00000469529 ARAP2Q8WZ64 1704 aa15.39■□□□□ 0.05
TRAF4-208ENST00000469529 TAF1P21675 1872 aa15.39■□□□□ 0.05
TRAF4-208ENST00000469529 BRCA1P38398 1863 aaKnown RBP15.39■□□□□ 0.05
TRAF4-208ENST00000469529 MAP3K12Q12852 859 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 MCMDC2Q4G0Z9 681 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
TRAF4-208ENST00000469529 PI16Q6UXB8 463 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 ARHGAP27Q6ZUM4 889 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 PODNQ7Z5L7 613 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 ZGPATQ8N5A5 531 aaKnown RBP15.38■□□□□ 0.05
TRAF4-208ENST00000469529 TBC1D32Q96NH3 1257 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 PIH1D3Q9NQM4 214 aaKnown RBP15.38■□□□□ 0.05
TRAF4-208ENST00000469529 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 FAM205AQ6ZU69 1335 aa15.38■□□□□ 0.05
TRAF4-208ENST00000469529 UTRNP46939 3433 aa15.37■□□□□ 0.05
TRAF4-208ENST00000469529 GOLGB1Q14789 3259 aaKnown RBP15.37■□□□□ 0.05
TRAF4-208ENST00000469529 ADD2P35612 726 aa15.37■□□□□ 0.05
TRAF4-208ENST00000469529 NMIQ13287 307 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-208ENST00000469529 WASHC4Q2M389 1173 aa15.37■□□□□ 0.05
TRAF4-208ENST00000469529 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
TRAF4-208ENST00000469529 SPTY2D1Q68D10 685 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-208ENST00000469529 CWC27Q6UX04 472 aaKnown RBP15.37■□□□□ 0.05
TRAF4-208ENST00000469529 SUGT1Q9Y2Z0 365 aa15.37■□□□□ 0.05
TRAF4-208ENST00000469529 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
TRAF4-208ENST00000469529 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
TRAF4-208ENST00000469529 MFAP1P55081 439 aaKnown RBP15.36■□□□□ 0.05
TRAF4-208ENST00000469529 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
TRAF4-208ENST00000469529 SLC51AQ86UW1 340 aa15.36■□□□□ 0.05
TRAF4-208ENST00000469529 TBC1D22AQ8WUA7 517 aa15.36■□□□□ 0.05
TRAF4-208ENST00000469529 APPBP2Q92624 585 aa15.36■□□□□ 0.05
TRAF4-208ENST00000469529 FAM227BQ96M60 508 aa15.36■□□□□ 0.05
TRAF4-208ENST00000469529 C22orf23Q9BZE7 217 aa15.36■□□□□ 0.05
TRAF4-208ENST00000469529 COL11A2P13942 1736 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-208ENST00000469529 A0A1B0GUL6 1792 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 C21orf2O43822 256 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 FKBP1AP62942 108 aaKnown RBP15.35■□□□□ 0.05
TRAF4-208ENST00000469529 SLC9C2Q5TAH2 1124 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 KIAA1211Q6ZU35 1233 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 MAP4K1Q92918 833 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 LSG1Q9H089 658 aaKnown RBP15.35■□□□□ 0.05
TRAF4-208ENST00000469529 IL25Q9H293 177 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 ARFGEF1Q9Y6D6 1849 aa15.35■□□□□ 0.05
TRAF4-208ENST00000469529 A0A0D9SFI3 127 aa15.34■□□□□ 0.05
TRAF4-208ENST00000469529 FRAT2O75474 233 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-208ENST00000469529 PDE6AP16499 860 aa15.34■□□□□ 0.05
TRAF4-208ENST00000469529 KCNB2Q92953 911 aa15.34■□□□□ 0.05
TRAF4-208ENST00000469529 MRIQ9BWK5 157 aa15.34■□□□□ 0.05
TRAF4-208ENST00000469529 LRP2BPQ9P2M1 347 aa15.34■□□□□ 0.05
TRAF4-208ENST00000469529 AKAP11Q9UKA4 1901 aa15.34■□□□□ 0.05
TRAF4-208ENST00000469529 DUOX1Q9NRD9 1551 aa15.33■□□□□ 0.05
TRAF4-208ENST00000469529 IDH1O75874 414 aaKnown RBP15.33■□□□□ 0.04
TRAF4-208ENST00000469529 ANAPC15P60006 121 aa15.33■□□□□ 0.04
TRAF4-208ENST00000469529 OSBP2Q969R2 916 aa15.33■□□□□ 0.04
TRAF4-208ENST00000469529 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-208ENST00000469529 SLX4Q8IY92 1834 aa15.33■□□□□ 0.04
TRAF4-208ENST00000469529 DLEC1Q9Y238 1755 aa15.32■□□□□ 0.04
TRAF4-208ENST00000469529 ERICH6Q7L0X2 663 aa15.32■□□□□ 0.04
TRAF4-208ENST00000469529 ZNF526Q8TF50 670 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-208ENST00000469529 NSUN4Q96CB9 384 aaKnown RBP15.32■□□□□ 0.04
TRAF4-208ENST00000469529 DSCC1Q9BVC3 393 aa15.32■□□□□ 0.04
TRAF4-208ENST00000469529 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-208ENST00000469529 IQSEC3Q9UPP2 1182 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-208ENST00000469529 CCDC171Q6TFL3 1326 aa15.32■□□□□ 0.04
TRAF4-208ENST00000469529 ZNF532Q9HCE3 1301 aa15.32■□□□□ 0.04
TRAF4-208ENST00000469529 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
TRAF4-208ENST00000469529 COL1A1P02452 1464 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-208ENST00000469529 HSPA4P34932 840 aa15.31■□□□□ 0.04
TRAF4-208ENST00000469529 NECTIN1Q15223 517 aa15.31■□□□□ 0.04
TRAF4-208ENST00000469529 TSGA10IPQ3SY00 556 aa15.31■□□□□ 0.04
TRAF4-208ENST00000469529 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
TRAF4-208ENST00000469529 GPR101Q96P66 508 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-208ENST00000469529 ANO2Q9NQ90 1003 aa15.31■□□□□ 0.04
TRAF4-208ENST00000469529 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-208ENST00000469529 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 MAST3O60307 1309 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 LDHCP07864 332 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 C1QTNF8P60827 252 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 ALX1Q15699 326 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-208ENST00000469529 CERS3Q8IU89 383 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 MAGEB6Q8N7X4 407 aa15.3■□□□□ 0.04
TRAF4-208ENST00000469529 SEC62Q99442 399 aaKnown RBP15.3■□□□□ 0.04
TRAF4-208ENST00000469529 PUS7LQ9H0K6 701 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms