RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 STK11IPQ8N1F8 1099 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 PAXBP1Q9Y5B6 917 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 UBE2Q2LH0YL09 131 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 ATP1A3P13637 1013 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 CDC25BP30305 580 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 GOLGA8BA8MQT2 603 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 RNF113AO15541 343 aaKnown RBP14.09□□□□□ -0.15
VARS2-205ENST00000469358 RBM6P78332 1123 aaKnown RBP14.09□□□□□ -0.15
VARS2-205ENST00000469358 ARMCX5Q6P1M9 558 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 USP54Q70EL1 1684 aa14.09□□□□□ -0.15
VARS2-205ENST00000469358 HMGB1P09429 215 aaKnown RBP14.08□□□□□ -0.16
VARS2-205ENST00000469358 GORABQ5T7V8 394 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 LINC00301Q8NCQ3 95 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 PLBD2Q8NHP8 589 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 C8orf76Q96K31 380 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 DSCC1Q9BVC3 393 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 HELLSQ9NRZ9 838 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 ORC3Q9UBD5 711 aaPredicted RBP14.08□□□□□ -0.16
VARS2-205ENST00000469358 CTAGE5O15320 804 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 UTP14CQ5TAP6 766 aaKnown RBP14.08□□□□□ -0.16
VARS2-205ENST00000469358 E4F1Q66K89 784 aaPredicted RBP14.08□□□□□ -0.16
VARS2-205ENST00000469358 FBXO38Q6PIJ6 1188 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 SYNE4Q8N205 404 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 KLHL34Q8N239 644 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 PUS7LQ9H0K6 701 aaKnown RBP14.08□□□□□ -0.16
VARS2-205ENST00000469358 NEDD4P46934 1319 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 FGAP02671 866 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 AGXT2Q9BYV1 514 aa14.08□□□□□ -0.16
VARS2-205ENST00000469358 PRC1O43663 620 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 SYT10Q6XYQ8 523 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 INCENPQ9NQS7 918 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 KIAA1468Q9P260 1216 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 HPS5Q9UPZ3 1129 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 H7C1W4 665 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 KIF18AQ8NI77 898 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 OGFRQ9NZT2 677 aa14.07□□□□□ -0.16
VARS2-205ENST00000469358 WDHD1O75717 1129 aaPredicted RBP14.06□□□□□ -0.16
VARS2-205ENST00000469358 ANTXR2P58335 489 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 ZNF771Q7L3S4 317 aaPredicted RBP14.06□□□□□ -0.16
VARS2-205ENST00000469358 MROH7-TTC4A0A0A0MT08 1334 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 EYA2O00167 538 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 ZRSR1Q15695 479 aaKnown RBP14.06□□□□□ -0.16
VARS2-205ENST00000469358 ADALQ6DHV7 355 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 DPF2Q92785 391 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 CWC25Q9NXE8 425 aaPredicted RBP14.06□□□□□ -0.16
VARS2-205ENST00000469358 RTEL1Q9NZ71 1219 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 DDX41Q9UJV9 622 aaKnown RBP14.06□□□□□ -0.16
VARS2-205ENST00000469358 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 SPTLC2O15270 562 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 ZNF202O95125 648 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 CAVIN2O95810 425 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 ZAP70P43403 619 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 ERCC6LQ2NKX8 1250 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 PROSER2Q86WR7 435 aaPredicted RBP14.06□□□□□ -0.16
VARS2-205ENST00000469358 ZNF274Q96GC6 653 aaPredicted RBP14.06□□□□□ -0.16
VARS2-205ENST00000469358 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
VARS2-205ENST00000469358 LAMA4Q16363 1823 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 PHKBQ93100 1093 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 DCAF5Q96JK2 942 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
VARS2-205ENST00000469358 CPLX1O14810 134 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 SLC3A2P08195 630 aaKnown RBP14.05□□□□□ -0.16
VARS2-205ENST00000469358 SPECC1Q5M775 1068 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 MYSM1Q5VVJ2 828 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 MYL10Q9BUA6 226 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 CGNQ9P2M7 1197 aaKnown RBP14.05□□□□□ -0.16
VARS2-205ENST00000469358 PFKFB1P16118 471 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 IL15P40933 162 aaPredicted RBP14.05□□□□□ -0.16
VARS2-205ENST00000469358 FBXO18Q8NFZ0 1043 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 ZBTB9Q96C00 473 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 PPP1R13BQ96KQ4 1090 aa14.05□□□□□ -0.16
VARS2-205ENST00000469358 FER1L4A9Z1Z3 1794 aa14.04□□□□□ -0.16
VARS2-205ENST00000469358 SIPA1L3O60292 1781 aaPredicted RBP14.04□□□□□ -0.16
VARS2-205ENST00000469358 FAM177A1Q8N128 213 aaPredicted RBP14.04□□□□□ -0.16
VARS2-205ENST00000469358 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
VARS2-205ENST00000469358 XAGE2Q96GT9 111 aa14.04□□□□□ -0.16
VARS2-205ENST00000469358 FEZ1Q99689 392 aa14.04□□□□□ -0.16
VARS2-205ENST00000469358 NCAPHQ15003 741 aa14.04□□□□□ -0.16
VARS2-205ENST00000469358 TTC39AQ5SRH9 613 aa14.04□□□□□ -0.16
VARS2-205ENST00000469358 NAT10Q9H0A0 1025 aaKnown RBP14.04□□□□□ -0.16
VARS2-205ENST00000469358 ZNF446Q9NWS9 450 aa14.03□□□□□ -0.16
VARS2-205ENST00000469358 PNOCQ13519 176 aa14.03□□□□□ -0.16
VARS2-205ENST00000469358 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
VARS2-205ENST00000469358 CEP126Q9P2H0 1117 aa14.03□□□□□ -0.16
VARS2-205ENST00000469358 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
VARS2-205ENST00000469358 EPC1Q9H2F5 836 aa14.03□□□□□ -0.16
VARS2-205ENST00000469358 AFDNP55196 1824 aaKnown RBP14.02□□□□□ -0.16
VARS2-205ENST00000469358 TMEM232C9JQI7 657 aa14.02□□□□□ -0.16
VARS2-205ENST00000469358 FOXN1O15353 648 aa14.02□□□□□ -0.16
VARS2-205ENST00000469358 SFPQP23246 707 aaKnown RBP eCLIP14.02□□□□□ -0.16
VARS2-205ENST00000469358 IMMTQ16891 758 aaKnown RBP14.02□□□□□ -0.16
VARS2-205ENST00000469358 ANO1Q5XXA6 986 aa14.02□□□□□ -0.16
VARS2-205ENST00000469358 SLIT3O75094 1523 aa14.02□□□□□ -0.16
VARS2-205ENST00000469358 FANCGO15287 622 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 NEMFO60524 1076 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 KIF23Q02241 960 aaPredicted RBP14.02□□□□□ -0.17
VARS2-205ENST00000469358 MB21D2Q8IYB1 491 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms