RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 ZNF804BA4D1E1 1349 aa16.52■□□□□ 0.24
HDAC6-217ENST00000469223 EVI5O60447 810 aa16.52■□□□□ 0.24
HDAC6-217ENST00000469223 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-217ENST00000469223 GPR153Q6NV75 609 aa16.52■□□□□ 0.24
HDAC6-217ENST00000469223 PLBD2Q8NHP8 589 aa16.52■□□□□ 0.24
HDAC6-217ENST00000469223 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
HDAC6-217ENST00000469223 CLRN2A0PK11 232 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 NEFMP07197 916 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 GJB1P08034 283 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 CCL5P13501 91 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 CCDC152Q4G0S7 254 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 MTMR10Q9NXD2 777 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 PCDHAC2Q9Y5I4 1007 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 A0A1B0GUL6 1792 aa16.51■□□□□ 0.23
HDAC6-217ENST00000469223 USP2O75604 605 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-217ENST00000469223 MMP14P50281 582 aa16.5■□□□□ 0.23
HDAC6-217ENST00000469223 DLGAP5Q15398 846 aa16.5■□□□□ 0.23
HDAC6-217ENST00000469223 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
HDAC6-217ENST00000469223 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
HDAC6-217ENST00000469223 PRMT2P55345 433 aa16.49■□□□□ 0.23
HDAC6-217ENST00000469223 RNF208Q9H0X6 261 aa16.49■□□□□ 0.23
HDAC6-217ENST00000469223 PRDM6Q9NQX0 595 aa16.49■□□□□ 0.23
HDAC6-217ENST00000469223 AOX1Q06278 1338 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 TLR2O60603 784 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 GNRH1P01148 92 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 GRK4P32298 578 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 GTF2A2P52657 109 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 TTLL5Q6EMB2 1281 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 TXNRD3Q86VQ6 643 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
HDAC6-217ENST00000469223 CTGFP29279 349 aa16.47■□□□□ 0.23
HDAC6-217ENST00000469223 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
HDAC6-217ENST00000469223 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
HDAC6-217ENST00000469223 ZBTB38Q8NAP3 1195 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-217ENST00000469223 RAET1EQ8TD07 263 aa16.47■□□□□ 0.23
HDAC6-217ENST00000469223 U2AF1L4Q8WU68 220 aaKnown RBP16.47■□□□□ 0.23
HDAC6-217ENST00000469223 SRRDQ9UH36 339 aa16.47■□□□□ 0.23
HDAC6-217ENST00000469223 RIPOR2Q9Y4F9 1068 aa16.47■□□□□ 0.23
HDAC6-217ENST00000469223 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-217ENST00000469223 KLRK1P26718 216 aa16.46■□□□□ 0.23
HDAC6-217ENST00000469223 CCT4P50991 539 aaKnown RBP16.46■□□□□ 0.23
HDAC6-217ENST00000469223 GTF2IP78347 998 aa16.46■□□□□ 0.23
HDAC6-217ENST00000469223 TRIM47Q96LD4 638 aa16.46■□□□□ 0.23
HDAC6-217ENST00000469223 GDF15Q99988 308 aa16.46■□□□□ 0.23
HDAC6-217ENST00000469223 BIN2Q9UBW5 565 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-217ENST00000469223 MYPNQ86TC9 1320 aa16.45■□□□□ 0.22
HDAC6-217ENST00000469223 OSBPP22059 807 aa16.45■□□□□ 0.22
HDAC6-217ENST00000469223 BCAMP50895 628 aa16.45■□□□□ 0.22
HDAC6-217ENST00000469223 VGLL4Q14135 290 aa16.45■□□□□ 0.22
HDAC6-217ENST00000469223 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-217ENST00000469223 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
HDAC6-217ENST00000469223 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-217ENST00000469223 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 MYO1BO43795 1136 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 PDE8AO60658 829 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 HSP90B1P14625 803 aaKnown RBP16.44■□□□□ 0.22
HDAC6-217ENST00000469223 PSMC4P43686 418 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 TRIM28Q13263 835 aaKnown RBP16.44■□□□□ 0.22
HDAC6-217ENST00000469223 RASA3Q14644 834 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 CERS5Q8N5B7 392 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 UNC93B1Q9H1C4 597 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
HDAC6-217ENST00000469223 CDH23Q9H251 3354 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 BDP1A6H8Y1 2624 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 DDX60LQ5H9U9 1706 aaKnown RBP16.43■□□□□ 0.22
HDAC6-217ENST00000469223 F8W031 263 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-217ENST00000469223 BMP8BP34820 402 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 UBXN2AP68543 259 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 CFAP100Q494V2 611 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 HDGFL1Q5TGJ6 251 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 C7orf61Q8IZ16 206 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
HDAC6-217ENST00000469223 ZMYND8Q9ULU4 1186 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-217ENST00000469223 MINPP1Q9UNW1 487 aa16.43■□□□□ 0.22
HDAC6-217ENST00000469223 BTBD19C9JJ37 291 aa16.42■□□□□ 0.22
HDAC6-217ENST00000469223 CPA4Q9UI42 421 aa16.42■□□□□ 0.22
HDAC6-217ENST00000469223 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-217ENST00000469223 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-217ENST00000469223 PRMT6Q96LA8 375 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-217ENST00000469223 ZCCHC17Q9NP64 241 aaKnown RBP16.41■□□□□ 0.22
HDAC6-217ENST00000469223 CSADQ9Y600 493 aa16.41■□□□□ 0.22
HDAC6-217ENST00000469223 NCOR1O75376 2440 aa16.4■□□□□ 0.22
HDAC6-217ENST00000469223 SGPL1O95470 568 aa16.4■□□□□ 0.22
HDAC6-217ENST00000469223 CETPP11597 493 aa16.4■□□□□ 0.22
HDAC6-217ENST00000469223 COL9A1P20849 921 aa16.4■□□□□ 0.22
HDAC6-217ENST00000469223 PRKCZQ05513 592 aa16.4■□□□□ 0.22
HDAC6-217ENST00000469223 TDHQ8IZJ6 230 aa16.4■□□□□ 0.22
HDAC6-217ENST00000469223 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.4■□□□□ 0.22
HDAC6-217ENST00000469223 BSDC1Q9NW68 430 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-217ENST00000469223 BABAM1Q9NWV8 329 aa16.4■□□□□ 0.22
HDAC6-217ENST00000469223 DNAH12Q6ZR08 3092 aa16.39■□□□□ 0.22
HDAC6-217ENST00000469223 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
HDAC6-217ENST00000469223 HOXD10P28358 340 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms