RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 FAM210AQ96ND0 272 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 RTCBQ9Y3I0 505 aaKnown RBP11.53□□□□□ -0.56
NUP50-214ENST00000469163 CAMTA1Q9Y6Y1 1673 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 RAD21O60216 631 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 SDSP20132 328 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 MTA1Q13330 715 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 ITPK1Q13572 414 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 RABEP1Q15276 862 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 MFSD4BQ5TF39 518 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 DEFB132Q7Z7B7 95 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 FBXO18Q8NFZ0 1043 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 THOC1Q96FV9 657 aaKnown RBP11.52□□□□□ -0.56
NUP50-214ENST00000469163 GPATCH3Q96I76 525 aa11.52□□□□□ -0.56
NUP50-214ENST00000469163 METTL22Q9BUU2 404 aaPredicted RBP11.52□□□□□ -0.56
NUP50-214ENST00000469163 EIF3CLB5ME19 914 aaKnown RBP11.52□□□□□ -0.57
NUP50-214ENST00000469163 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
NUP50-214ENST00000469163 KRT27Q7Z3Y8 459 aa11.52□□□□□ -0.57
NUP50-214ENST00000469163 GPR101Q96P66 508 aaPredicted RBP11.52□□□□□ -0.57
NUP50-214ENST00000469163 CEP89Q96ST8 783 aa11.52□□□□□ -0.57
NUP50-214ENST00000469163 EIF3CQ99613 913 aaKnown RBP11.52□□□□□ -0.57
NUP50-214ENST00000469163 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.57
NUP50-214ENST00000469163 ABCC4O15439 1325 aa11.52□□□□□ -0.57
NUP50-214ENST00000469163 NUCB1Q02818 461 aa11.52□□□□□ -0.57
NUP50-214ENST00000469163 SUGP1Q8IWZ8 645 aaKnown RBP11.52□□□□□ -0.57
NUP50-214ENST00000469163 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.57
NUP50-214ENST00000469163 CCDC87Q9NVE4 849 aa11.52□□□□□ -0.57
NUP50-214ENST00000469163 ATP8B2P98198 1209 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 C11orf91Q3C1V1 193 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 RAB11FIP4Q86YS3 637 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 SETDB2Q96T68 719 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 ANKIB1Q9P2G1 1089 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 PIK3C2AO00443 1686 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 RINLQ6ZS11 566 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 MICALL1Q8N3F8 863 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
NUP50-214ENST00000469163 ZCCHC17Q9NP64 241 aaKnown RBP11.51□□□□□ -0.57
NUP50-214ENST00000469163 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
NUP50-214ENST00000469163 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 K7ELQ4 463 aaPredicted RBP11.51□□□□□ -0.57
NUP50-214ENST00000469163 CPA1P15085 419 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
NUP50-214ENST00000469163 TPD52L1Q16890 204 aaPredicted RBP11.51□□□□□ -0.57
NUP50-214ENST00000469163 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 PDRG1Q9NUG6 133 aa11.51□□□□□ -0.57
NUP50-214ENST00000469163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
NUP50-214ENST00000469163 F8W031 263 aaPredicted RBP11.5□□□□□ -0.57
NUP50-214ENST00000469163 PLBD2Q8NHP8 589 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 GREM2Q9H772 168 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 PAXBP1Q9Y5B6 917 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 RAD50Q92878 1312 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 RXRBP28702 533 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 TTC39AQ5SRH9 613 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 GBP6Q6ZN66 633 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 PLEKHM2Q8IWE5 1019 aa11.5□□□□□ -0.57
NUP50-214ENST00000469163 ECEL1O95672 775 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 IBSPP21815 317 aaPredicted RBP11.49□□□□□ -0.57
NUP50-214ENST00000469163 STK3Q13188 491 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 ZRSR1Q15695 479 aaKnown RBP11.49□□□□□ -0.57
NUP50-214ENST00000469163 CHAMP1Q96JM3 812 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 KDM4CQ9H3R0 1056 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 ETAA1Q9NY74 926 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 NSFL1CQ9UNZ2 370 aaKnown RBP11.49□□□□□ -0.57
NUP50-214ENST00000469163 IQSEC2Q5JU85 1478 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 AKAP12Q02952 1782 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 ITGA6P23229 1130 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 PDE1AP54750 535 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 HAND2P61296 217 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 PDIA6Q15084 440 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 SKIDA1Q1XH10 827 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 CCDC129Q6ZRS4 1044 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 ERCC4Q92889 916 aaPredicted RBP11.49□□□□□ -0.57
NUP50-214ENST00000469163 SNX21Q969T3 373 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 JCADQ9P266 1359 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 KDM6AO15550 1401 aaPredicted RBP11.49□□□□□ -0.57
NUP50-214ENST00000469163 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 INHBEP58166 350 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 C1QTNF12Q5T7M4 302 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 HEG1Q9ULI3 1381 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 PEAK1Q9H792 1746 aa11.49□□□□□ -0.57
NUP50-214ENST00000469163 IRX1P78414 480 aaPredicted RBP11.48□□□□□ -0.57
NUP50-214ENST00000469163 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
NUP50-214ENST00000469163 RRP12Q5JTH9 1297 aaKnown RBP11.48□□□□□ -0.57
NUP50-214ENST00000469163 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 MON2Q7Z3U7 1717 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 WTIPA6NIX2 430 aaPredicted RBP11.48□□□□□ -0.57
NUP50-214ENST00000469163 CDC45O75419 566 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 NEK4P51957 841 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
NUP50-214ENST00000469163 AK9Q5TCS8 1911 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
NUP50-214ENST00000469163 ANKRD23Q86SG2 305 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms