RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 ZNF669Q96BR6 464 aaPredicted RBP6.56□□□□□ -1.36
SMG5-202ENST00000468993 MFSD3Q96ES6 412 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 OXCT2Q9BYC2 517 aaPredicted RBP6.56□□□□□ -1.36
SMG5-202ENST00000468993 IL21Q9HBE4 155 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 MCM8Q9UJA3 840 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 RTCBQ9Y3I0 505 aaKnown RBP6.56□□□□□ -1.36
SMG5-202ENST00000468993 CD2APQ9Y5K6 639 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 KCNMB2Q9Y691 235 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 KDM2BQ8NHM5 1336 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 SH3BP5O60239 455 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 ALDH1L1O75891 902 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 ADH1CP00326 375 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 GTF2E1P29083 439 aaPredicted RBP6.55□□□□□ -1.36
SMG5-202ENST00000468993 INPP5BP32019 993 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 FCGRTP55899 365 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 HLTFQ14527 1009 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMG5-202ENST00000468993 CMTR1Q8N1G2 835 aaKnown RBP6.55□□□□□ -1.36
SMG5-202ENST00000468993 ZSWIM2Q8NEG5 633 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 ST13P5Q8NFI4 369 aaPredicted RBP6.55□□□□□ -1.36
SMG5-202ENST00000468993 SUSD3Q96L08 255 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 FERD3LQ96RJ6 166 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 ZSCAN10Q96SZ4 725 aaPredicted RBP6.55□□□□□ -1.36
SMG5-202ENST00000468993 CAAP1Q9H8G2 361 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 BSDC1Q9NW68 430 aaPredicted RBP6.55□□□□□ -1.36
SMG5-202ENST00000468993 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
SMG5-202ENST00000468993 EIF4G3O43432 1585 aaKnown RBP6.55□□□□□ -1.36
SMG5-202ENST00000468993 A0A1W2PP55 124 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 CENPBP07199 599 aaPredicted RBP6.54□□□□□ -1.36
SMG5-202ENST00000468993 PAX3P23760 479 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 SOX5P35711 763 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 IRX6P78412 446 aaPredicted RBP6.54□□□□□ -1.36
SMG5-202ENST00000468993 SEPT6Q14141 434 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 PPP2R5AQ15172 486 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 TTF1Q15361 905 aaPredicted RBP6.54□□□□□ -1.36
SMG5-202ENST00000468993 SEZ6Q53EL9 994 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 LARP1BQ659C4 914 aaKnown RBP6.54□□□□□ -1.36
SMG5-202ENST00000468993 DDX42Q86XP3 938 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMG5-202ENST00000468993 SAMD3Q8N6K7 520 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 C1orf127Q8N9H9 656 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 C7orf43Q8WVR3 580 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 NINJ1Q92982 152 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 NLRP3Q96P20 1036 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 CEP44Q9C0F1 390 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 ZFYVE1Q9HBF4 777 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 TERF2IPQ9NYB0 399 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 ABI2Q9NYB9 513 aaPredicted RBP6.54□□□□□ -1.36
SMG5-202ENST00000468993 ZDHHC3Q9NYG2 299 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 AKAP2Q9Y2D5 859 aa6.54□□□□□ -1.36
SMG5-202ENST00000468993 ABCC10Q5T3U5 1492 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 DIAPH1O60610 1272 aaKnown RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 FBXO24O75426 580 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 IMPDH2P12268 514 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 EDN3P14138 238 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 ZNF165P49910 485 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 CASP7P55210 303 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 RPS26P62854 115 aaKnown RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 SSRP1Q08945 709 aaKnown RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 SAFB2Q14151 953 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMG5-202ENST00000468993 NBPF1Q3BBV0 1214 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 TMEM67Q5HYA8 995 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 TMEM214Q6NUQ4 689 aaKnown RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 DTHD1Q6ZMT9 781 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 AGMOQ6ZNB7 445 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 CCDC84Q86UT8 332 aaPredicted RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 NIM1KQ8IY84 436 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 KDF1Q8NAX2 398 aaPredicted RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 PNISRQ8TF01 805 aaKnown RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 FAM126AQ9BYI3 521 aaPredicted RBP6.53□□□□□ -1.36
SMG5-202ENST00000468993 MAF1Q9H063 256 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 ABCB6Q9NP58 842 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 ANKIB1Q9P2G1 1089 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 ZMYM5Q9UJ78 669 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 USP20Q9Y2K6 914 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 TLL2Q9Y6L7 1015 aa6.53□□□□□ -1.36
SMG5-202ENST00000468993 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 RGS20O76081 388 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 GJB6O95452 261 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 CELA3AP09093 270 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 MYCLP1P12525 358 aaPredicted RBP6.52□□□□□ -1.37
SMG5-202ENST00000468993 CES1P23141 567 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 VPS72Q15906 364 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 CWF19L2Q2TBE0 894 aaKnown RBP6.52□□□□□ -1.37
SMG5-202ENST00000468993 LONRF3Q496Y0 759 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 CT47A1Q5JQC4 288 aaPredicted RBP6.52□□□□□ -1.37
SMG5-202ENST00000468993 TJAP1Q5JTD0 557 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 FBXW10Q5XX13 1052 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 SPATC1Q76KD6 591 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 TRIM42Q8IWZ5 723 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 RBBP8NLQ8NC74 664 aaPredicted RBP6.52□□□□□ -1.37
SMG5-202ENST00000468993 ZNF516Q92618 1163 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 ZNRF3Q9ULT6 936 aa6.52□□□□□ -1.37
SMG5-202ENST00000468993 MEN1O00255 615 aa6.51□□□□□ -1.37
SMG5-202ENST00000468993 MYL1P05976 194 aa6.51□□□□□ -1.37
SMG5-202ENST00000468993 EPB42P16452 691 aa6.51□□□□□ -1.37
SMG5-202ENST00000468993 TFE3P19532 575 aaPredicted RBP6.51□□□□□ -1.37
SMG5-202ENST00000468993 PTGIRP43119 386 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms