RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 ECE1P42892 770 aa16.16■□□□□ 0.18
CLRN1-204ENST00000468836 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
CLRN1-204ENST00000468836 CHAF1AQ13111 956 aaPredicted RBP16.16■□□□□ 0.18
CLRN1-204ENST00000468836 TLL2Q9Y6L7 1015 aa16.16■□□□□ 0.18
CLRN1-204ENST00000468836 MYO1BO43795 1136 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 VEGFBP49765 207 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 RBM5P52756 815 aaKnown RBP eCLIP16.15■□□□□ 0.18
CLRN1-204ENST00000468836 FKBP1AP62942 108 aaKnown RBP16.15■□□□□ 0.18
CLRN1-204ENST00000468836 DLGAP5Q15398 846 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 MFSD14BQ5SR56 506 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 CST9Q5W186 159 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 C2orf69Q8N8R5 385 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 TDRD7Q8NHU6 1098 aaKnown RBP16.15■□□□□ 0.18
CLRN1-204ENST00000468836 LPIN2Q92539 896 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 FAM84BQ96KN1 310 aaPredicted RBP16.15■□□□□ 0.18
CLRN1-204ENST00000468836 ASTN2O75129 1339 aaPredicted RBP16.15■□□□□ 0.18
CLRN1-204ENST00000468836 PITPNM2Q9BZ72 1349 aa16.15■□□□□ 0.18
CLRN1-204ENST00000468836 WNT10BO00744 389 aa16.14■□□□□ 0.17
CLRN1-204ENST00000468836 MS4A1P11836 297 aa16.14■□□□□ 0.17
CLRN1-204ENST00000468836 ATP2B3Q16720 1220 aa16.14■□□□□ 0.17
CLRN1-204ENST00000468836 NBPF9Q3BBW0 867 aa16.14■□□□□ 0.17
CLRN1-204ENST00000468836 VGLL2Q8N8G2 317 aa16.14■□□□□ 0.17
CLRN1-204ENST00000468836 AIDAQ96BJ3 306 aa16.14■□□□□ 0.17
CLRN1-204ENST00000468836 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
CLRN1-204ENST00000468836 PA2G4Q9UQ80 394 aaKnown RBP16.14■□□□□ 0.17
CLRN1-204ENST00000468836 PSME4Q14997 1843 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 HSPA1AP0DMV8 641 aaKnown RBP16.13■□□□□ 0.17
CLRN1-204ENST00000468836 HSPA1BP0DMV9 641 aaKnown RBP16.13■□□□□ 0.17
CLRN1-204ENST00000468836 NF2P35240 595 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 CERS5Q8N5B7 392 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 TBC1D22AQ8WUA7 517 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 CDCA5Q96FF9 252 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 GBA2Q9HCG7 927 aaPredicted RBP16.13■□□□□ 0.17
CLRN1-204ENST00000468836 COPRSQ9NQ92 184 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
CLRN1-204ENST00000468836 FAM205AQ6ZU69 1335 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 WDR33Q9C0J8 1336 aaKnown RBP16.13■□□□□ 0.17
CLRN1-204ENST00000468836 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
CLRN1-204ENST00000468836 BCAMP50895 628 aa16.12■□□□□ 0.17
CLRN1-204ENST00000468836 HUNKP57058 714 aa16.12■□□□□ 0.17
CLRN1-204ENST00000468836 CYP4F22Q6NT55 531 aa16.12■□□□□ 0.17
CLRN1-204ENST00000468836 ATG9AQ7Z3C6 839 aa16.12■□□□□ 0.17
CLRN1-204ENST00000468836 FBXO33Q7Z6M2 555 aa16.12■□□□□ 0.17
CLRN1-204ENST00000468836 SAPCD2Q86UD0 394 aa16.12■□□□□ 0.17
CLRN1-204ENST00000468836 APOBEC3FQ8IUX4 373 aaKnown RBP16.12■□□□□ 0.17
CLRN1-204ENST00000468836 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
CLRN1-204ENST00000468836 MTX1Q13505 466 aa16.11■□□□□ 0.17
CLRN1-204ENST00000468836 CFAP100Q494V2 611 aa16.11■□□□□ 0.17
CLRN1-204ENST00000468836 DLK2Q6UY11 383 aa16.11■□□□□ 0.17
CLRN1-204ENST00000468836 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
CLRN1-204ENST00000468836 AKAP2Q9Y2D5 859 aa16.11■□□□□ 0.17
CLRN1-204ENST00000468836 FGFR2P21802 821 aa16.1■□□□□ 0.17
CLRN1-204ENST00000468836 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLRN1-204ENST00000468836 OS9Q13438 667 aaPredicted RBP16.1■□□□□ 0.17
CLRN1-204ENST00000468836 TTLL12Q14166 644 aaPredicted RBP16.1■□□□□ 0.17
CLRN1-204ENST00000468836 BEGAINQ9BUH8 593 aa16.1■□□□□ 0.17
CLRN1-204ENST00000468836 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
CLRN1-204ENST00000468836 RCAN3Q9UKA8 241 aa16.1■□□□□ 0.17
CLRN1-204ENST00000468836 MAP2K1Q02750 393 aaPredicted RBP16.09■□□□□ 0.17
CLRN1-204ENST00000468836 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
CLRN1-204ENST00000468836 HHIPL1Q96JK4 782 aa16.09■□□□□ 0.17
CLRN1-204ENST00000468836 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
CLRN1-204ENST00000468836 MAST3O60307 1309 aa16.09■□□□□ 0.17
CLRN1-204ENST00000468836 CLRN2A0PK11 232 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 SPDYE2BA6NHP3 402 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 SPDYE6P0CI01 402 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 MTMR14Q8NCE2 650 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
CLRN1-204ENST00000468836 PNMA6EA0A0J9YXQ4 647 aa16.07■□□□□ 0.16
CLRN1-204ENST00000468836 RLBP1P12271 317 aa16.07■□□□□ 0.16
CLRN1-204ENST00000468836 FKBP1BP68106 108 aa16.07■□□□□ 0.16
CLRN1-204ENST00000468836 TFCP2Q12800 502 aa16.07■□□□□ 0.16
CLRN1-204ENST00000468836 GORABQ5T7V8 394 aa16.07■□□□□ 0.16
CLRN1-204ENST00000468836 NEUROD6Q96NK8 337 aa16.07■□□□□ 0.16
CLRN1-204ENST00000468836 TRPM7Q96QT4 1865 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
CLRN1-204ENST00000468836 CRKP46108 304 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
CLRN1-204ENST00000468836 TNFAIP1Q13829 316 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
CLRN1-204ENST00000468836 PRAMEF18Q5VWM3 479 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 RGMBQ6NW40 437 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 ZBED3Q96IU2 234 aaPredicted RBP16.06■□□□□ 0.16
CLRN1-204ENST00000468836 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
CLRN1-204ENST00000468836 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 DENND2AQ9ULE3 1009 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
CLRN1-204ENST00000468836 A0A1B0GUL7 405 aa16.05■□□□□ 0.16
CLRN1-204ENST00000468836 SEMA3EO15041 775 aa16.05■□□□□ 0.16
CLRN1-204ENST00000468836 NOGQ13253 232 aa16.05■□□□□ 0.16
CLRN1-204ENST00000468836 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
CLRN1-204ENST00000468836 CCDC102AQ96A19 550 aa16.05■□□□□ 0.16
CLRN1-204ENST00000468836 PRMT6Q96LA8 375 aaPredicted RBP16.05■□□□□ 0.16
CLRN1-204ENST00000468836 DEFB129Q9H1M3 183 aa16.05■□□□□ 0.16
CLRN1-204ENST00000468836 SUGT1Q9Y2Z0 365 aa16.05■□□□□ 0.16
CLRN1-204ENST00000468836 ZNF646O15015 1829 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms