RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 SASH1O94885 1247 aa26.6■■□□□ 1.85
SHANK1-206ENST00000468654 MOB2Q70IA6 237 aa26.6■■□□□ 1.85
SHANK1-206ENST00000468654 ZBED3Q96IU2 234 aaPredicted RBP26.6■■□□□ 1.85
SHANK1-206ENST00000468654 DGKZQ13574 1117 aa26.59■■□□□ 1.85
SHANK1-206ENST00000468654 RABL6Q3YEC7 729 aaPredicted RBP26.59■■□□□ 1.85
SHANK1-206ENST00000468654 CERS5Q8N5B7 392 aa26.59■■□□□ 1.85
SHANK1-206ENST00000468654 RNF186Q9NXI6 227 aa26.59■■□□□ 1.85
SHANK1-206ENST00000468654 PRAMEF18Q5VWM3 479 aa26.58■■□□□ 1.85
SHANK1-206ENST00000468654 BICC1Q9H694 974 aaKnown RBP26.58■■□□□ 1.85
SHANK1-206ENST00000468654 COL1A1P02452 1464 aaPredicted RBP26.57■■□□□ 1.84
SHANK1-206ENST00000468654 PLIN1O60240 522 aa26.57■■□□□ 1.84
SHANK1-206ENST00000468654 FKBP1AP62942 108 aaKnown RBP26.57■■□□□ 1.84
SHANK1-206ENST00000468654 ALDH1L2Q3SY69 923 aa26.57■■□□□ 1.84
SHANK1-206ENST00000468654 CDCA7LQ96GN5 454 aa26.57■■□□□ 1.84
SHANK1-206ENST00000468654 CSRNP1Q96S65 589 aa26.57■■□□□ 1.84
SHANK1-206ENST00000468654 UBE4AQ14139 1066 aa26.56■■□□□ 1.84
SHANK1-206ENST00000468654 APOBEC3FQ8IUX4 373 aaKnown RBP26.56■■□□□ 1.84
SHANK1-206ENST00000468654 TRMT2AQ8IZ69 625 aaKnown RBP26.56■■□□□ 1.84
SHANK1-206ENST00000468654 ANKRD44Q8N8A2 993 aa26.56■■□□□ 1.84
SHANK1-206ENST00000468654 PUS3Q9BZE2 481 aaKnown RBP26.56■■□□□ 1.84
SHANK1-206ENST00000468654 SSC5DA1L4H1 1573 aa26.55■■□□□ 1.84
SHANK1-206ENST00000468654 TRPA1O75762 1119 aa26.55■■□□□ 1.84
SHANK1-206ENST00000468654 RIPOR2Q9Y4F9 1068 aa26.55■■□□□ 1.84
SHANK1-206ENST00000468654 PDE4DIPQ5VU43 2346 aa26.55■■□□□ 1.84
SHANK1-206ENST00000468654 CCER2I3L3R5 266 aa26.54■■□□□ 1.84
SHANK1-206ENST00000468654 MTMR14Q8NCE2 650 aa26.54■■□□□ 1.84
SHANK1-206ENST00000468654 MROH5Q6ZUA9 1318 aa26.53■■□□□ 1.84
SHANK1-206ENST00000468654 UBE2Q2LH0YL09 131 aa26.52■■□□□ 1.84
SHANK1-206ENST00000468654 DLGAP5Q15398 846 aa26.52■■□□□ 1.84
SHANK1-206ENST00000468654 FAM205AQ6ZU69 1335 aa26.52■■□□□ 1.84
SHANK1-206ENST00000468654 USP44Q9H0E7 712 aa26.52■■□□□ 1.84
SHANK1-206ENST00000468654 SMC4Q9NTJ3 1288 aa26.52■■□□□ 1.84
SHANK1-206ENST00000468654 NF2P35240 595 aa26.51■■□□□ 1.83
SHANK1-206ENST00000468654 RGS19P49795 217 aa26.51■■□□□ 1.83
SHANK1-206ENST00000468654 JAG2Q9Y219 1238 aa26.51■■□□□ 1.83
SHANK1-206ENST00000468654 CT47B1P0C2W7 299 aaPredicted RBP26.5■■□□□ 1.83
SHANK1-206ENST00000468654 TDRD7Q8NHU6 1098 aaKnown RBP26.5■■□□□ 1.83
SHANK1-206ENST00000468654 SPDYE2BA6NHP3 402 aa26.49■■□□□ 1.83
SHANK1-206ENST00000468654 F8W031 263 aaPredicted RBP26.49■■□□□ 1.83
SHANK1-206ENST00000468654 SPDYE6P0CI01 402 aa26.49■■□□□ 1.83
SHANK1-206ENST00000468654 HIBADHP31937 336 aaKnown RBP26.49■■□□□ 1.83
SHANK1-206ENST00000468654 GYG1P46976 350 aa26.49■■□□□ 1.83
SHANK1-206ENST00000468654 CFAP100Q494V2 611 aa26.49■■□□□ 1.83
SHANK1-206ENST00000468654 LRRC24Q50LG9 513 aa26.49■■□□□ 1.83
SHANK1-206ENST00000468654 FAM84BQ96KN1 310 aaPredicted RBP26.49■■□□□ 1.83
SHANK1-206ENST00000468654 PCDHAC2Q9Y5I4 1007 aa26.49■■□□□ 1.83
SHANK1-206ENST00000468654 TTLL12Q14166 644 aaPredicted RBP26.48■■□□□ 1.83
SHANK1-206ENST00000468654 REM2Q8IYK8 340 aaPredicted RBP26.48■■□□□ 1.83
SHANK1-206ENST00000468654 VGLL2Q8N8G2 317 aa26.48■■□□□ 1.83
SHANK1-206ENST00000468654 MLLT1Q03111 559 aaPredicted RBP26.47■■□□□ 1.83
SHANK1-206ENST00000468654 HTTP42858 3142 aa26.47■■□□□ 1.83
SHANK1-206ENST00000468654 METTL24Q5JXM2 366 aa26.46■■□□□ 1.83
SHANK1-206ENST00000468654 MFSD14BQ5SR56 506 aa26.46■■□□□ 1.83
SHANK1-206ENST00000468654 DEFB129Q9H1M3 183 aa26.46■■□□□ 1.83
SHANK1-206ENST00000468654 PPP2R3BQ9Y5P8 575 aa26.46■■□□□ 1.83
SHANK1-206ENST00000468654 FBXO33Q7Z6M2 555 aa26.45■■□□□ 1.82
SHANK1-206ENST00000468654 KLHDC4Q8TBB5 520 aa26.45■■□□□ 1.82
SHANK1-206ENST00000468654 AOX1Q06278 1338 aa26.44■■□□□ 1.82
SHANK1-206ENST00000468654 MYO1BO43795 1136 aa26.44■■□□□ 1.82
SHANK1-206ENST00000468654 PRKG1Q13976 671 aa26.44■■□□□ 1.82
SHANK1-206ENST00000468654 ARMC9Q7Z3E5 817 aa26.44■■□□□ 1.82
SHANK1-206ENST00000468654 PRMT6Q96LA8 375 aaPredicted RBP26.44■■□□□ 1.82
SHANK1-206ENST00000468654 FZD1Q9UP38 647 aa26.44■■□□□ 1.82
SHANK1-206ENST00000468654 CLRN2A0PK11 232 aa26.43■■□□□ 1.82
SHANK1-206ENST00000468654 PDE8BO95263 885 aa26.43■■□□□ 1.82
SHANK1-206ENST00000468654 PTPN12Q05209 780 aaKnown RBP26.43■■□□□ 1.82
SHANK1-206ENST00000468654 MKRN3Q13064 507 aaKnown RBP26.43■■□□□ 1.82
SHANK1-206ENST00000468654 RFX5P48382 616 aaPredicted RBP26.42■■□□□ 1.82
SHANK1-206ENST00000468654 LDLRAD1Q5T700 205 aa26.42■■□□□ 1.82
SHANK1-206ENST00000468654 CTU1Q7Z7A3 348 aaKnown RBP26.42■■□□□ 1.82
SHANK1-206ENST00000468654 VPS37DQ86XT2 251 aa26.42■■□□□ 1.82
SHANK1-206ENST00000468654 SERPINA10Q9UK55 444 aa26.42■■□□□ 1.82
SHANK1-206ENST00000468654 KIF16BQ96L93 1317 aa26.41■■□□□ 1.82
SHANK1-206ENST00000468654 RBM5P52756 815 aaKnown RBP eCLIP26.41■■□□□ 1.82
SHANK1-206ENST00000468654 NOB1Q9ULX3 412 aaKnown RBP26.41■■□□□ 1.82
SHANK1-206ENST00000468654 TTF2Q9UNY4 1162 aaKnown RBP26.41■■□□□ 1.82
SHANK1-206ENST00000468654 CAVIN4Q5BKX8 364 aa26.4■■□□□ 1.82
SHANK1-206ENST00000468654 API5Q9BZZ5 524 aaKnown RBP26.4■■□□□ 1.82
SHANK1-206ENST00000468654 VEZTQ9HBM0 779 aa26.4■■□□□ 1.82
SHANK1-206ENST00000468654 ANGEL1Q9UNK9 670 aaKnown RBP26.4■■□□□ 1.82
SHANK1-206ENST00000468654 RBBP6Q7Z6E9 1792 aaKnown RBP26.39■■□□□ 1.82
SHANK1-206ENST00000468654 TBC1D8O95759 1140 aa26.39■■□□□ 1.82
SHANK1-206ENST00000468654 FGFR2P21802 821 aa26.39■■□□□ 1.82
SHANK1-206ENST00000468654 TM4SF4P48230 202 aa26.39■■□□□ 1.82
SHANK1-206ENST00000468654 PUM3Q15397 648 aaKnown RBP26.39■■□□□ 1.82
SHANK1-206ENST00000468654 MAP3K11Q16584 847 aa26.39■■□□□ 1.82
SHANK1-206ENST00000468654 IQSEC3Q9UPP2 1182 aaPredicted RBP26.39■■□□□ 1.82
SHANK1-206ENST00000468654 EYA2O00167 538 aa26.38■■□□□ 1.81
SHANK1-206ENST00000468654 UBTFL1P0CB47 393 aaPredicted RBP26.38■■□□□ 1.81
SHANK1-206ENST00000468654 RARSP54136 660 aaKnown RBP26.38■■□□□ 1.81
SHANK1-206ENST00000468654 SPDYE2Q495Y8 402 aa26.38■■□□□ 1.81
SHANK1-206ENST00000468654 SOX10P56693 466 aa26.37■■□□□ 1.81
SHANK1-206ENST00000468654 SPRYD7Q5W111 196 aa26.37■■□□□ 1.81
SHANK1-206ENST00000468654 TBC1D22AQ8WUA7 517 aa26.37■■□□□ 1.81
SHANK1-206ENST00000468654 ZNF296Q8WUU4 475 aaPredicted RBP26.37■■□□□ 1.81
SHANK1-206ENST00000468654 CENPFP49454 3210 aa26.36■■□□□ 1.81
SHANK1-206ENST00000468654 PPP1R12BO60237 982 aaPredicted RBP26.36■■□□□ 1.81
SHANK1-206ENST00000468654 IFIT1P09914 478 aaKnown RBP26.36■■□□□ 1.81
SHANK1-206ENST00000468654 CRKP46108 304 aa26.36■■□□□ 1.81
SHANK1-206ENST00000468654 SREBF2Q12772 1141 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms