RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 GPSM2P81274 684 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 VPS53Q5VIR6 699 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 TMC4Q7Z404 712 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 JAKMIP1Q96N16 626 aaKnown RBP22.7■■□□□ 1.22
SMC4-209ENST00000468653 PUS7LQ9H0K6 701 aaKnown RBP22.7■■□□□ 1.22
SMC4-209ENST00000468653 LRP2BPQ9P2M1 347 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 WWC3Q9ULE0 1092 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 HSPD1P10809 573 aaKnown RBP22.69■■□□□ 1.22
SMC4-209ENST00000468653 CASTP20810 708 aaKnown RBP22.69■■□□□ 1.22
SMC4-209ENST00000468653 SLC51AQ86UW1 340 aa22.69■■□□□ 1.22
SMC4-209ENST00000468653 TM6SF1Q9BZW5 370 aa22.69■■□□□ 1.22
SMC4-209ENST00000468653 NSFL1CQ9UNZ2 370 aaKnown RBP22.69■■□□□ 1.22
SMC4-209ENST00000468653 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
SMC4-209ENST00000468653 MAGEB6Q8N7X4 407 aa22.68■■□□□ 1.22
SMC4-209ENST00000468653 PPEF1O14829 653 aaPredicted RBP22.68■■□□□ 1.22
SMC4-209ENST00000468653 ATP2B4P23634 1241 aa22.68■■□□□ 1.22
SMC4-209ENST00000468653 PSMA5P28066 241 aa22.68■■□□□ 1.22
SMC4-209ENST00000468653 ADCK5Q3MIX3 580 aa22.68■■□□□ 1.22
SMC4-209ENST00000468653 QSER1Q2KHR3 1735 aa22.68■■□□□ 1.22
SMC4-209ENST00000468653 TCRBV5S4A2TA0A5A2 114 aa22.67■■□□□ 1.22
SMC4-209ENST00000468653 GPAA1O43292 621 aa22.67■■□□□ 1.22
SMC4-209ENST00000468653 CCDC125Q86Z20 511 aa22.67■■□□□ 1.22
SMC4-209ENST00000468653 ABCF2Q9UG63 623 aa22.67■■□□□ 1.22
SMC4-209ENST00000468653 GGA1Q9UJY5 639 aa22.67■■□□□ 1.22
SMC4-209ENST00000468653 UFL1O94874 794 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 TSGA10IPQ3SY00 556 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 TXNRD3Q86VQ6 643 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 CYP46A1Q9Y6A2 500 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 MYO5AQ9Y4I1 1855 aaKnown RBP22.66■■□□□ 1.22
SMC4-209ENST00000468653 IRS2Q9Y4H2 1338 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 KRT32Q14532 448 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 SP8Q8IXZ3 490 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 MASTLQ96GX5 879 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 ZSWIM6Q9HCJ5 1215 aa22.66■■□□□ 1.22
SMC4-209ENST00000468653 RAI14Q9P0K7 980 aa22.65■■□□□ 1.22
SMC4-209ENST00000468653 COL1A1P02452 1464 aaPredicted RBP22.64■■□□□ 1.22
SMC4-209ENST00000468653 PDS5AQ29RF7 1337 aaKnown RBP22.64■■□□□ 1.22
SMC4-209ENST00000468653 DOCK2Q92608 1830 aa22.64■■□□□ 1.22
SMC4-209ENST00000468653 C15orf52Q6ZUT6 534 aaKnown RBP22.64■■□□□ 1.22
SMC4-209ENST00000468653 NOL8Q76FK4 1167 aaKnown RBP22.64■■□□□ 1.22
SMC4-209ENST00000468653 ZNF804AQ7Z570 1209 aa22.64■■□□□ 1.22
SMC4-209ENST00000468653 AIDAQ96BJ3 306 aa22.64■■□□□ 1.22
SMC4-209ENST00000468653 FOXD4L1Q9NU39 408 aa22.64■■□□□ 1.22
SMC4-209ENST00000468653 PODXL2Q9NZ53 605 aa22.64■■□□□ 1.22
SMC4-209ENST00000468653 CTNNA3Q9UI47 895 aa22.64■■□□□ 1.22
SMC4-209ENST00000468653 ATP6V0A2Q9Y487 856 aa22.64■■□□□ 1.22
SMC4-209ENST00000468653 CYP21A2P08686 494 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 CPA1P15085 419 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 RUFY3Q7L099 469 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 C2CD5Q86YS7 1000 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 ZNF622Q969S3 477 aaKnown RBP eCLIP22.63■■□□□ 1.212e-7■■□□□ 13.9
SMC4-209ENST00000468653 PDRG1Q9NUG6 133 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 CHAF1AQ13111 956 aaPredicted RBP22.63■■□□□ 1.21
SMC4-209ENST00000468653 BLOC1S2Q6QNY1 142 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 TTC14Q96N46 770 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 GPR101Q96P66 508 aaPredicted RBP22.63■■□□□ 1.21
SMC4-209ENST00000468653 TMX4Q9H1E5 349 aaPredicted RBP22.63■■□□□ 1.21
SMC4-209ENST00000468653 TAF6LQ9Y6J9 622 aa22.63■■□□□ 1.21
SMC4-209ENST00000468653 RPAP1Q9BWH6 1393 aaPredicted RBP22.63■■□□□ 1.21
SMC4-209ENST00000468653 H0YIN7 160 aa22.62■■□□□ 1.21
SMC4-209ENST00000468653 TMX3Q96JJ7 454 aa22.62■■□□□ 1.21
SMC4-209ENST00000468653 PDGFDQ9GZP0 370 aaPredicted RBP22.62■■□□□ 1.21
SMC4-209ENST00000468653 C6orf229H3BNL8 230 aa22.61■■□□□ 1.21
SMC4-209ENST00000468653 ZBTB22O15209 634 aa22.61■■□□□ 1.21
SMC4-209ENST00000468653 CYP7A1P22680 504 aa22.61■■□□□ 1.21
SMC4-209ENST00000468653 TBC1D16Q8TBP0 767 aa22.61■■□□□ 1.21
SMC4-209ENST00000468653 FOXP2O15409 715 aa22.61■■□□□ 1.21
SMC4-209ENST00000468653 AK2P54819 239 aa22.61■■□□□ 1.21
SMC4-209ENST00000468653 CHMP5Q9NZZ3 219 aa22.61■■□□□ 1.21
SMC4-209ENST00000468653 MBD4O95243 580 aa22.6■■□□□ 1.21
SMC4-209ENST00000468653 APPP05067 770 aa22.6■■□□□ 1.21
SMC4-209ENST00000468653 STYK1Q6J9G0 422 aa22.6■■□□□ 1.21
SMC4-209ENST00000468653 NEK1Q96PY6 1258 aa22.6■■□□□ 1.21
SMC4-209ENST00000468653 STRBPQ96SI9 672 aaKnown RBP22.6■■□□□ 1.21
SMC4-209ENST00000468653 POLLQ9UGP5 575 aa22.6■■□□□ 1.21
SMC4-209ENST00000468653 FGAP02671 866 aa22.59■■□□□ 1.21
SMC4-209ENST00000468653 IMMTQ16891 758 aaKnown RBP22.59■■□□□ 1.21
SMC4-209ENST00000468653 TTLL5Q6EMB2 1281 aa22.59■■□□□ 1.21
SMC4-209ENST00000468653 TDRD7Q8NHU6 1098 aaKnown RBP22.59■■□□□ 1.21
SMC4-209ENST00000468653 SLC16A10Q8TF71 515 aa22.59■■□□□ 1.21
SMC4-209ENST00000468653 RPS6KB1P23443 525 aa22.58■■□□□ 1.21
SMC4-209ENST00000468653 MPNDQ8N594 471 aa22.58■■□□□ 1.21
SMC4-209ENST00000468653 ARMT1Q9H993 441 aa22.58■■□□□ 1.21
SMC4-209ENST00000468653 LIMCH1Q9UPQ0 1083 aa22.58■■□□□ 1.21
SMC4-209ENST00000468653 COL11A2P13942 1736 aaPredicted RBP22.58■■□□□ 1.21
SMC4-209ENST00000468653 NAA16Q6N069 864 aaPredicted RBP22.58■■□□□ 1.2
SMC4-209ENST00000468653 WDR66Q8TBY9 1149 aa22.58■■□□□ 1.2
SMC4-209ENST00000468653 MYH13Q9UKX3 1938 aa22.58■■□□□ 1.2
SMC4-209ENST00000468653 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
SMC4-209ENST00000468653 SPTY2D1Q68D10 685 aaPredicted RBP22.57■■□□□ 1.2
SMC4-209ENST00000468653 ILDR1Q86SU0 546 aaPredicted RBP22.57■■□□□ 1.2
SMC4-209ENST00000468653 ZGPATQ8N5A5 531 aaKnown RBP22.57■■□□□ 1.2
SMC4-209ENST00000468653 CD209Q9NNX6 404 aa22.57■■□□□ 1.2
SMC4-209ENST00000468653 JAG2Q9Y219 1238 aa22.57■■□□□ 1.2
SMC4-209ENST00000468653 A0A0G2JLW4 131 aa22.56■■□□□ 1.2
SMC4-209ENST00000468653 GNAT2P19087 354 aa22.56■■□□□ 1.2
SMC4-209ENST00000468653 DDIT3P35638 169 aa22.56■■□□□ 1.2
SMC4-209ENST00000468653 MIGA1Q8NAN2 632 aa22.56■■□□□ 1.2
SMC4-209ENST00000468653 CIZ1Q9ULV3 898 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms