RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 FOSL1P15407 271 aa7.47□□□□□ -1.21
SSB-208ENST00000468600 PDE12Q6L8Q7 609 aaKnown RBP7.47□□□□□ -1.21
SSB-208ENST00000468600 VSIG10LQ86VR7 867 aa7.47□□□□□ -1.21
SSB-208ENST00000468600 SLC7A3Q8WY07 619 aa7.47□□□□□ -1.21
SSB-208ENST00000468600 FBXL18Q96ME1 805 aa7.47□□□□□ -1.21
SSB-208ENST00000468600 FBXL6Q8N531 539 aa7.46□□□□□ -1.22
SSB-208ENST00000468600 STIM2Q9P246 746 aa7.46□□□□□ -1.22
SSB-208ENST00000468600 KANSL3Q9P2N6 904 aa7.46□□□□□ -1.22
SSB-208ENST00000468600 PAPLNO95428 1278 aa7.45□□□□□ -1.22
SSB-208ENST00000468600 F13BP05160 661 aa7.45□□□□□ -1.22
SSB-208ENST00000468600 SRPK2P78362 688 aaKnown RBP7.45□□□□□ -1.22
SSB-208ENST00000468600 SGO2Q562F6 1265 aa7.45□□□□□ -1.22
SSB-208ENST00000468600 ZNF438Q7Z4V0 828 aa7.45□□□□□ -1.22
SSB-208ENST00000468600 ELP3Q9H9T3 547 aa7.45□□□□□ -1.22
SSB-208ENST00000468600 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
SSB-208ENST00000468600 FAM69CQ0P6D2 419 aa7.44□□□□□ -1.22
SSB-208ENST00000468600 C19orf57Q0VDD7 668 aa7.44□□□□□ -1.22
SSB-208ENST00000468600 NAA30Q147X3 362 aaPredicted RBP7.44□□□□□ -1.22
SSB-208ENST00000468600 NUTM2GQ5VZR2 741 aa7.44□□□□□ -1.22
SSB-208ENST00000468600 TP53INP2Q8IXH6 220 aa7.44□□□□□ -1.22
SSB-208ENST00000468600 METTL22Q9BUU2 404 aaPredicted RBP7.44□□□□□ -1.22
SSB-208ENST00000468600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.44□□□□□ -1.22
SSB-208ENST00000468600 MEGF11A6BM72 1044 aa7.43□□□□□ -1.22
SSB-208ENST00000468600 RPLP1P05386 114 aaKnown RBP7.43□□□□□ -1.22
SSB-208ENST00000468600 PAOXQ6QHF9 649 aa7.43□□□□□ -1.22
SSB-208ENST00000468600 C12orf50Q8NA57 414 aaPredicted RBP7.43□□□□□ -1.22
SSB-208ENST00000468600 CYP4F12Q9HCS2 524 aa7.43□□□□□ -1.22
SSB-208ENST00000468600 TMEM63CQ9P1W3 806 aa7.43□□□□□ -1.22
SSB-208ENST00000468600 ZMIZ1Q9ULJ6 1067 aa7.43□□□□□ -1.22
SSB-208ENST00000468600 PDE2AO00408 941 aaPredicted RBP7.42□□□□□ -1.22
SSB-208ENST00000468600 SHISA5Q8N114 240 aa7.42□□□□□ -1.22
SSB-208ENST00000468600 NUDT16Q96DE0 195 aaKnown RBP7.42□□□□□ -1.22
SSB-208ENST00000468600 FAM95CA0A1B0GW59 222 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 ATG7O95352 703 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 CES1P23141 567 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 NFKBIBQ15653 356 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 CAPN12Q6ZSI9 719 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 USP26Q9BXU7 913 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 PAK6Q9NQU5 681 aaPredicted RBP7.41□□□□□ -1.22
SSB-208ENST00000468600 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 SALL4Q9UJQ4 1053 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 SOX13Q9UN79 622 aa7.41□□□□□ -1.22
SSB-208ENST00000468600 ACPPP15309 386 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 PCSK2P16519 638 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 USP11P51784 963 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 KRTAP5-3Q6L8H2 238 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 TTC16Q8NEE8 873 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 STK32AQ8WU08 396 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 YIPF2Q9BWQ6 316 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 SUGCTQ9HAC7 445 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 CNTN3Q9P232 1028 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 CARMIL2Q6F5E8 1435 aa7.4□□□□□ -1.22
SSB-208ENST00000468600 NFKBIEO00221 500 aa7.39□□□□□ -1.23
SSB-208ENST00000468600 ZBTB39O15060 712 aa7.39□□□□□ -1.23
SSB-208ENST00000468600 CYP26A1O43174 497 aa7.39□□□□□ -1.23
SSB-208ENST00000468600 IKBKEQ14164 716 aa7.39□□□□□ -1.23
SSB-208ENST00000468600 SMG8Q8ND04 991 aaKnown RBP7.39□□□□□ -1.23
SSB-208ENST00000468600 AGBL5Q8NDL9 886 aa7.39□□□□□ -1.23
SSB-208ENST00000468600 TMPRSS13Q9BYE2 586 aa7.39□□□□□ -1.23
SSB-208ENST00000468600 BSDC1Q9NW68 430 aaPredicted RBP7.39□□□□□ -1.23
SSB-208ENST00000468600 TIAF1O95411 115 aa7.38□□□□□ -1.23
SSB-208ENST00000468600 FLCNQ8NFG4 579 aa7.38□□□□□ -1.23
SSB-208ENST00000468600 BSNDQ8WZ55 320 aa7.38□□□□□ -1.23
SSB-208ENST00000468600 PMEPA1Q969W9 287 aa7.38□□□□□ -1.23
SSB-208ENST00000468600 TBC1D32Q96NH3 1257 aa7.38□□□□□ -1.23
SSB-208ENST00000468600 LOC100289279A0A1B0GTE1 492 aa7.37□□□□□ -1.23
SSB-208ENST00000468600 HGSNATQ68CP4 663 aa7.37□□□□□ -1.23
SSB-208ENST00000468600 C1orf127Q8N9H9 656 aa7.37□□□□□ -1.23
SSB-208ENST00000468600 TMEM102Q8N9M5 508 aaPredicted RBP7.37□□□□□ -1.23
SSB-208ENST00000468600 FBLIM1Q8WUP2 373 aa7.37□□□□□ -1.23
SSB-208ENST00000468600 CLP1Q92989 425 aaKnown RBP7.37□□□□□ -1.23
SSB-208ENST00000468600 HHIPQ96QV1 700 aa7.37□□□□□ -1.23
SSB-208ENST00000468600 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
SSB-208ENST00000468600 TRPA1O75762 1119 aa7.36□□□□□ -1.23
SSB-208ENST00000468600 ZNF865P0CJ78 1059 aaPredicted RBP7.36□□□□□ -1.23
SSB-208ENST00000468600 XKR5Q6UX68 686 aa7.36□□□□□ -1.23
SSB-208ENST00000468600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.35□□□□□ -1.23
SSB-208ENST00000468600 SOX1O00570 391 aaPredicted RBP7.35□□□□□ -1.23
SSB-208ENST00000468600 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
SSB-208ENST00000468600 C8orf34Q49A92 452 aa7.35□□□□□ -1.23
SSB-208ENST00000468600 TMEM164Q5U3C3 297 aa7.35□□□□□ -1.23
SSB-208ENST00000468600 ZAR1Q86SH2 424 aa7.35□□□□□ -1.23
SSB-208ENST00000468600 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
SSB-208ENST00000468600 EDEM1Q92611 657 aa7.35□□□□□ -1.23
SSB-208ENST00000468600 SOX17Q9H6I2 414 aaPredicted RBP7.35□□□□□ -1.23
SSB-208ENST00000468600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.35□□□□□ -1.23
SSB-208ENST00000468600 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
SSB-208ENST00000468600 EXOSC6Q5RKV6 272 aaKnown RBP7.34□□□□□ -1.23
SSB-208ENST00000468600 CDPF1Q6NVV7 123 aa7.34□□□□□ -1.23
SSB-208ENST00000468600 OSMRQ99650 979 aa7.34□□□□□ -1.23
SSB-208ENST00000468600 PRKAG2Q9UGJ0 569 aa7.34□□□□□ -1.23
SSB-208ENST00000468600 DRD2P14416 443 aa7.33□□□□□ -1.24
SSB-208ENST00000468600 DUSP27Q5VZP5 1158 aa7.33□□□□□ -1.24
SSB-208ENST00000468600 VN1R5Q7Z5H4 357 aa7.33□□□□□ -1.24
SSB-208ENST00000468600 WFDC3Q8IUB2 231 aa7.33□□□□□ -1.24
SSB-208ENST00000468600 C2CD4AQ8NCU7 369 aaPredicted RBP7.33□□□□□ -1.24
SSB-208ENST00000468600 NXPE3Q969Y0 559 aa7.33□□□□□ -1.24
SSB-208ENST00000468600 PBXIP1Q96AQ6 731 aa7.33□□□□□ -1.24
SSB-208ENST00000468600 FARP2O94887 1054 aaPredicted RBP7.32□□□□□ -1.24
SSB-208ENST00000468600 EDN3P14138 238 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms